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The map label for this gene is 187930590

Identifier: 187930590

GI number: 187930590

Start: 3697393

End: 3698094

Strand: Reverse

Name: 187930590

Synonym: Rpic_3526

Alternate gene names: NA

Gene position: 3698094-3697393 (Counterclockwise)

Preceding gene: 187930592

Following gene: 187930589

Centisome position: 93.8

GC content: 66.81

Gene sequence:

>702_bases
ATGAATCGGCCGCGGCCCGGGCGCATACGCTTGCAGCACGCGTACGAGTCGGCCGCTTGCCAGGTCTTCGGCGACGAGCA
CTTCGGGCTGCAGCAGCAGGCCGGCACCGGTCAGCGCTGCCGCGCGCAAGCCATGGCCGTCGTAGGCGCCATTCCAACCG
GATTTGCGAGGGAGCAAGACAGGAAGATCGTCGTGATTGGTGCCAGCGGCACGCTGGGCCGCGCCGTGGTGGCGGAACTG
GAGCAGGGCGGTGCGCACGAAATCATCCGCGTCGGCCGCACGCAGGGTGAGCATCAGGTCGACATCACCAATGCCGACAG
CGTGGCCGCACTGTTCGACAAGGTTGGCCGCGTTGATGCGATCGTCTCCACCGCCGGCAACCTGTTCTTCGGGCCGCTGA
CAAAGATGACGGCCGCGGATTTCACCGTTGGCCTGCAGGACAAGCTGCTCGGTCAGGTGCGCCTGGCGCTCGTCGGCCAG
CATTATCTGAACGACGGCGGCTCGATCACGCTGACGACCGGTATCGTGGGGCAGGAGCCTGTTGCACAAGGCGCCAACGC
GAGCGCCGTCAACGCGGGCGTGGAGGGTTTTGTGCGCGCCGCCGCGTGCGAACTGCCGCGCGGCATCCGCATGAACGCGG
TGAGCCCGACGGTGCTGACCGAATCGATGGAGGCGTATGGCGCGTTCTTTCCGGGCTTCTAG

Upstream 100 bases:

>100_bases
GTGCCGCCGATGCGGGGACGAACGTGGGCACCTGCGCCAGCAAATGCTCCACAAAACCGGAGAGCTTCGGTAGCGGCCGC
CGGTCCTGCCGATACACGAC

Downstream 100 bases:

>100_bases
CCTGTGCCGGCAGCGCGTGCGGCGCTGGCGTACCGACGCAGCGTGGAGGGCGTGCAGAGCGGCCGGGTGTATCGCGTAGG
CTGAATCTGCCCAGATCGTG

Product: short chain dehydrogenase

Products: NA

Alternate protein names: Short-Chain Dehydrogenase/Reductase SDR; Dehydrogenase; Short-Chain Dehydrogenase; Short-Chain Dehydrogenase Protein; Short Chain Dehydrogenase/Reductase Family Oxidoreductase; 3-Oxoacyl-[Acyl-Carrier-Protein] Reductase; NAD-Dependent Epimerase/Dehydratase; Oxidoreductase; Aklaviketone Reductase; DTDP-4-Dehydrorhamnose Reductase; Short Chain Dehydrogenase Family Protein; Dehydrogenases With Different Specificities; Oxidoreductase Short Chain Dehydrogenase/Reductase Family

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MNRPRPGRIRLQHAYESAACQVFGDEHFGLQQQAGTGQRCRAQAMAVVGAIPTGFAREQDRKIVVIGASGTLGRAVVAEL
EQGGAHEIIRVGRTQGEHQVDITNADSVAALFDKVGRVDAIVSTAGNLFFGPLTKMTAADFTVGLQDKLLGQVRLALVGQ
HYLNDGGSITLTTGIVGQEPVAQGANASAVNAGVEGFVRAAACELPRGIRMNAVSPTVLTESMEAYGAFFPGF

Sequences:

>Translated_233_residues
MNRPRPGRIRLQHAYESAACQVFGDEHFGLQQQAGTGQRCRAQAMAVVGAIPTGFAREQDRKIVVIGASGTLGRAVVAEL
EQGGAHEIIRVGRTQGEHQVDITNADSVAALFDKVGRVDAIVSTAGNLFFGPLTKMTAADFTVGLQDKLLGQVRLALVGQ
HYLNDGGSITLTTGIVGQEPVAQGANASAVNAGVEGFVRAAACELPRGIRMNAVSPTVLTESMEAYGAFFPGF
>Mature_233_residues
MNRPRPGRIRLQHAYESAACQVFGDEHFGLQQQAGTGQRCRAQAMAVVGAIPTGFAREQDRKIVVIGASGTLGRAVVAEL
EQGGAHEIIRVGRTQGEHQVDITNADSVAALFDKVGRVDAIVSTAGNLFFGPLTKMTAADFTVGLQDKLLGQVRLALVGQ
HYLNDGGSITLTTGIVGQEPVAQGANASAVNAGVEGFVRAAACELPRGIRMNAVSPTVLTESMEAYGAFFPGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24434; Mature: 24434

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRPRPGRIRLQHAYESAACQVFGDEHFGLQQQAGTGQRCRAQAMAVVGAIPTGFAREQD
CCCCCCCCEEEEEHHCCHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
RKIVVIGASGTLGRAVVAELEQGGAHEIIRVGRTQGEHQVDITNADSVAALFDKVGRVDA
CEEEEEECCCCHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHH
IVSTAGNLFFGPLTKMTAADFTVGLQDKLLGQVRLALVGQHYLNDGGSITLTTGIVGQEP
HHHHCCCEEECCHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCH
VAQGANASAVNAGVEGFVRAAACELPRGIRMNAVSPTVLTESMEAYGAFFPGF
HHCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNRPRPGRIRLQHAYESAACQVFGDEHFGLQQQAGTGQRCRAQAMAVVGAIPTGFAREQD
CCCCCCCCEEEEEHHCCHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
RKIVVIGASGTLGRAVVAELEQGGAHEIIRVGRTQGEHQVDITNADSVAALFDKVGRVDA
CEEEEEECCCCHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHH
IVSTAGNLFFGPLTKMTAADFTVGLQDKLLGQVRLALVGQHYLNDGGSITLTTGIVGQEP
HHHHCCCEEECCHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCH
VAQGANASAVNAGVEGFVRAAACELPRGIRMNAVSPTVLTESMEAYGAFFPGF
HHCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA