| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is mnmG
Identifier: 187930588
GI number: 187930588
Start: 3693288
End: 3695237
Strand: Reverse
Name: mnmG
Synonym: Rpic_3523
Alternate gene names: 187930588
Gene position: 3695237-3693288 (Counterclockwise)
Preceding gene: 187930589
Following gene: 187930587
Centisome position: 93.73
GC content: 64.36
Gene sequence:
>1950_bases ATGCTGTATCCAATTGAATTCGATGTGATCGTGGTGGGCGGCGGACACGCCGGCACCGAGGCCGCCCTGGCGGCGGCGCG CATGGGCTGCCAGACCCTGCTGCTGACGCACAACATCGAGACCTTGGGGCAGATGAGCTGCAATCCGTCCATCGGCGGCA TCGGCAAGGGTCACCTGGTCAAGGAAGTGGATGCGCTCGGCGGCGCCATGGCCATTGCGACGGACGAGGGCGGGATCCAG TTCCGTATCCTCAATTCCAGCAAGGGCCCGGCCGTGAGGGCGACTCGCGCGCAGGCAGACCGCGTGCTGTACAAGGCGGC GATCCGTCATCGCCTGGAAAACCAGCCGAACCTGATGCTGTTCCAGCAGGCTGTGGAAGACCTGGTGGTAGAAGGCGATC GCGTAATCGGGGCGGTGACGCAGGTTGGCGTGCAGTTCCGTGCACGTGCTGTGGTACTGACGGCCGGCACGTTCCTCGAC GGCAAGATCCACGTCGGGCTAAACAACTACACCGGCGGTCGCGCGGGCGACCCGGCTGCGGTATCGCTGTCGGCGCGTCT GAAGGAATTGAAGCTGCCGCAAGGCCGCCTCAAAACCGGCACGCCGCCGCGCATTGACGGCCGCTCCATCGATTTTTCGG TGCTCGAAGAGCAGCCGGGTGATCTCGATCCGGTGCCGGTGTTCTCGTTCATGGGCCGCGCGGACATGCATCCGCGTCAA GTGCCGTGCTGGGTAACGCACACCAACGAGCGCACGCACGACATCATCCGCGCCGGGCTGGACCGCTCCCCCATGTACAC GGGCGTGATCGAAGGGGTGGGGCCACGCTACTGCCCTAGCATTGAAGACAAGATCCATCGCTTCGCCAGCAAGGACAGCC ACCAGATCTTCCTGGAACCGGAGGGCTTGGCGACCAACGAGTTTTACCCGAACGGCGTGTCGACCAGCCTGCCGTTTGAT GTGCAGCTCGACCTGATCCACTCAATGCGCGGGCTGGAGAATGCCCACATCCTGCGTCCCGGTTACGCCATCGAGTACGA CTACTTCGACCCGCGCGGCCTCAAGGCCTCGCTGGAGTCGAAGGCGATTTCCGGCCTGTTCTTCGCTGGCCAGATCAACG GGACGACCGGTTACGAAGAGGCCGCGGCGCAAGGCCTGCTGGCGGGCATCAACGCCGGCCTGCAAGTGCAGGGCAAGGAT GCCTGGACGCCGCGCCGCGACCAGGCTTATCTGGGCGTGCTCGTCGACGACCTCATCACCCGGGGCGTGACCGAGCCGTA TCGCATGTTCACCAGCCGGGCCGAGTTCCGCCTCAGCCTGCGGGAAGACAACGCCGACATGCGCTTGACCGAAGTCGGCC GCACGCTGGGCGTGGTCGACGACGCTCGCTGGGATGCCTTCAACCGGAAGCGTGACGCTGTTTCACGTGAAACAGAGCGC CTCAAGTCGACTTGGGTGAATCCGGCCACGCTTCCGTTGGAAGACGCTGAGCCGGTCCTGGGCAAAGGCATTGAGCGCGA GTACGCCTTGGCCGACTTGCTGCGCCGGCCTAACGTGACGTACGAAACCCTTGTGGGCATGCAGGGCGGCAAGTACGCGC TCGAATCGCCGTTGGCTGAAGACCCGTTGCTGGCCGAGCAGATCCGCGAGCAGGTCGAGATCGGCATCAAATACCACGGC TATATCGCCCGGCAAGCCGATGAAGTGGAGCGCCTCGGTGCGAACGAGAACACCCGTCTGCCGGCCGATTTCGATTATTC GCAAGTGCGCGGTCTGTCGATCGAGGTCCAGCAGAAGCTCGCCAAGCACAAGCCCGAGACCATCGGACAGGCTTCACGTA TCTCCGGCATCACGCCGGCCGCCGTGTCGCTGCTGCTCGTGCACCTCAAGAAGGGCGTGCTGCGTGGCCAAGTTGGCCCG CGCGCCAGTTCAGAAGGCGAGGCCGCTTGA
Upstream 100 bases:
>100_bases AATTTCGTCTCGATTACCGCATCGTCGAACTGTGGTGTAGCTGCGCGACTTATAATTCCGCTTCTCCAAATTTTCAATGC CTCCATGCGAGGAGGAAGCC
Downstream 100 bases:
>100_bases TGGCGAATGCACTGACAGACGCCCGGGCAGAGTTGGAAGCCGGCGCCCGTGCGCTTGGCTTGTCGCTGGACGACGCGCAG GTCGATCGCCTGCTGGCGTA
Product: tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A
Number of amino acids: Translated: 649; Mature: 649
Protein sequence:
>649_residues MLYPIEFDVIVVGGGHAGTEAALAAARMGCQTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDALGGAMAIATDEGGIQ FRILNSSKGPAVRATRAQADRVLYKAAIRHRLENQPNLMLFQQAVEDLVVEGDRVIGAVTQVGVQFRARAVVLTAGTFLD GKIHVGLNNYTGGRAGDPAAVSLSARLKELKLPQGRLKTGTPPRIDGRSIDFSVLEEQPGDLDPVPVFSFMGRADMHPRQ VPCWVTHTNERTHDIIRAGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLATNEFYPNGVSTSLPFD VQLDLIHSMRGLENAHILRPGYAIEYDYFDPRGLKASLESKAISGLFFAGQINGTTGYEEAAAQGLLAGINAGLQVQGKD AWTPRRDQAYLGVLVDDLITRGVTEPYRMFTSRAEFRLSLREDNADMRLTEVGRTLGVVDDARWDAFNRKRDAVSRETER LKSTWVNPATLPLEDAEPVLGKGIEREYALADLLRRPNVTYETLVGMQGGKYALESPLAEDPLLAEQIREQVEIGIKYHG YIARQADEVERLGANENTRLPADFDYSQVRGLSIEVQQKLAKHKPETIGQASRISGITPAAVSLLLVHLKKGVLRGQVGP RASSEGEAA
Sequences:
>Translated_649_residues MLYPIEFDVIVVGGGHAGTEAALAAARMGCQTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDALGGAMAIATDEGGIQ FRILNSSKGPAVRATRAQADRVLYKAAIRHRLENQPNLMLFQQAVEDLVVEGDRVIGAVTQVGVQFRARAVVLTAGTFLD GKIHVGLNNYTGGRAGDPAAVSLSARLKELKLPQGRLKTGTPPRIDGRSIDFSVLEEQPGDLDPVPVFSFMGRADMHPRQ VPCWVTHTNERTHDIIRAGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLATNEFYPNGVSTSLPFD VQLDLIHSMRGLENAHILRPGYAIEYDYFDPRGLKASLESKAISGLFFAGQINGTTGYEEAAAQGLLAGINAGLQVQGKD AWTPRRDQAYLGVLVDDLITRGVTEPYRMFTSRAEFRLSLREDNADMRLTEVGRTLGVVDDARWDAFNRKRDAVSRETER LKSTWVNPATLPLEDAEPVLGKGIEREYALADLLRRPNVTYETLVGMQGGKYALESPLAEDPLLAEQIREQVEIGIKYHG YIARQADEVERLGANENTRLPADFDYSQVRGLSIEVQQKLAKHKPETIGQASRISGITPAAVSLLLVHLKKGVLRGQVGP RASSEGEAA >Mature_649_residues MLYPIEFDVIVVGGGHAGTEAALAAARMGCQTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDALGGAMAIATDEGGIQ FRILNSSKGPAVRATRAQADRVLYKAAIRHRLENQPNLMLFQQAVEDLVVEGDRVIGAVTQVGVQFRARAVVLTAGTFLD GKIHVGLNNYTGGRAGDPAAVSLSARLKELKLPQGRLKTGTPPRIDGRSIDFSVLEEQPGDLDPVPVFSFMGRADMHPRQ VPCWVTHTNERTHDIIRAGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEPEGLATNEFYPNGVSTSLPFD VQLDLIHSMRGLENAHILRPGYAIEYDYFDPRGLKASLESKAISGLFFAGQINGTTGYEEAAAQGLLAGINAGLQVQGKD AWTPRRDQAYLGVLVDDLITRGVTEPYRMFTSRAEFRLSLREDNADMRLTEVGRTLGVVDDARWDAFNRKRDAVSRETER LKSTWVNPATLPLEDAEPVLGKGIEREYALADLLRRPNVTYETLVGMQGGKYALESPLAEDPLLAEQIREQVEIGIKYHG YIARQADEVERLGANENTRLPADFDYSQVRGLSIEVQQKLAKHKPETIGQASRISGITPAAVSLLLVHLKKGVLRGQVGP RASSEGEAA
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family
Homologues:
Organism=Homo sapiens, GI74024895, Length=647, Percent_Identity=44.822256568779, Blast_Score=487, Evalue=1e-137, Organism=Homo sapiens, GI19882217, Length=672, Percent_Identity=43.1547619047619, Blast_Score=473, Evalue=1e-133, Organism=Homo sapiens, GI183227703, Length=687, Percent_Identity=42.2125181950509, Blast_Score=468, Evalue=1e-132, Organism=Escherichia coli, GI2367273, Length=636, Percent_Identity=70.2830188679245, Blast_Score=907, Evalue=0.0, Organism=Caenorhabditis elegans, GI17534255, Length=636, Percent_Identity=40.7232704402516, Blast_Score=462, Evalue=1e-130, Organism=Saccharomyces cerevisiae, GI6321202, Length=630, Percent_Identity=45.2380952380952, Blast_Score=500, Evalue=1e-142, Organism=Drosophila melanogaster, GI24658174, Length=647, Percent_Identity=45.9041731066461, Blast_Score=502, Evalue=1e-142,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MNMG_RALPJ (B2UGW0)
Other databases:
- EMBL: CP001068 - RefSeq: YP_001901075.1 - ProteinModelPortal: B2UGW0 - SMR: B2UGW0 - GeneID: 6286796 - GenomeReviews: CP001068_GR - KEGG: rpi:Rpic_3523 - HOGENOM: HBG284774 - OMA: GIQFRVL - ProtClustDB: PRK05192 - GO: GO:0005737 - HAMAP: MF_00129 - InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 - TIGRFAMs: TIGR00136
Pfam domain/function: PF01134 GIDA
EC number: NA
Molecular weight: Translated: 70810; Mature: 70810
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: PS01280 GIDA_1; PS01281 GIDA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYPIEFDVIVVGGGHAGTEAALAAARMGCQTLLLTHNIETLGQMSCNPSIGGIGKGHLV CCCEEEEEEEEEECCCCCHHHHHHHHHHCHHEEEEECCHHHHHCCCCCCCCCCCCCCHHH KEVDALGGAMAIATDEGGIQFRILNSSKGPAVRATRAQADRVLYKAAIRHRLENQPNLML HHHHHCCCEEEEEECCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHH FQQAVEDLVVEGDRVIGAVTQVGVQFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAA HHHHHHHHHHCCCHHHHHHHHHHHHHEEEEEEEEECEEECCEEEEEECCCCCCCCCCCCE VSLSARLKELKLPQGRLKTGTPPRIDGRSIDFSVLEEQPGDLDPVPVFSFMGRADMHPRQ EEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHCCCCCCCCCC VPCWVTHTNERTHDIIRAGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEP CCEEEECCCCHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEECC EGLATNEFYPNGVSTSLPFDVQLDLIHSMRGLENAHILRPGYAIEYDYFDPRGLKASLES CCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCEEECCCEEEEECCCCCCCCCHHHHH KAISGLFFAGQINGTTGYEEAAAQGLLAGINAGLQVQGKDAWTPRRDQAYLGVLVDDLIT HHHCEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHH RGVTEPYRMFTSRAEFRLSLREDNADMRLTEVGRTLGVVDDARWDAFNRKRDAVSRETER HCCCHHHHHHHCCCCEEEEEECCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH LKSTWVNPATLPLEDAEPVLGKGIEREYALADLLRRPNVTYETLVGMQGGKYALESPLAE HHHHCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCHHHCCCCCC DPLLAEQIREQVEIGIKYHGYIARQADEVERLGANENTRLPADFDYSQVRGLSIEVQQKL CCHHHHHHHHHHHCCEEEEEEEHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCHHHHHHH AKHKPETIGQASRISGITPAAVSLLLVHLKKGVLRGQVGPRASSEGEAA HHCCCHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MLYPIEFDVIVVGGGHAGTEAALAAARMGCQTLLLTHNIETLGQMSCNPSIGGIGKGHLV CCCEEEEEEEEEECCCCCHHHHHHHHHHCHHEEEEECCHHHHHCCCCCCCCCCCCCCHHH KEVDALGGAMAIATDEGGIQFRILNSSKGPAVRATRAQADRVLYKAAIRHRLENQPNLML HHHHHCCCEEEEEECCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHH FQQAVEDLVVEGDRVIGAVTQVGVQFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAA HHHHHHHHHHCCCHHHHHHHHHHHHHEEEEEEEEECEEECCEEEEEECCCCCCCCCCCCE VSLSARLKELKLPQGRLKTGTPPRIDGRSIDFSVLEEQPGDLDPVPVFSFMGRADMHPRQ EEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHCCCCCCCCCC VPCWVTHTNERTHDIIRAGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKDSHQIFLEP CCEEEECCCCHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEECC EGLATNEFYPNGVSTSLPFDVQLDLIHSMRGLENAHILRPGYAIEYDYFDPRGLKASLES CCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCEEECCCEEEEECCCCCCCCCHHHHH KAISGLFFAGQINGTTGYEEAAAQGLLAGINAGLQVQGKDAWTPRRDQAYLGVLVDDLIT HHHCEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHH RGVTEPYRMFTSRAEFRLSLREDNADMRLTEVGRTLGVVDDARWDAFNRKRDAVSRETER HCCCHHHHHHHCCCCEEEEEECCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH LKSTWVNPATLPLEDAEPVLGKGIEREYALADLLRRPNVTYETLVGMQGGKYALESPLAE HHHHCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCHHHCCCCCC DPLLAEQIREQVEIGIKYHGYIARQADEVERLGANENTRLPADFDYSQVRGLSIEVQQKL CCHHHHHHHHHHHCCEEEEEEEHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCHHHHHHH AKHKPETIGQASRISGITPAAVSLLLVHLKKGVLRGQVGPRASSEGEAA HHCCCHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA