| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is bugT [H]
Identifier: 187930437
GI number: 187930437
Start: 3531722
End: 3532720
Strand: Reverse
Name: bugT [H]
Synonym: Rpic_3371
Alternate gene names: 187930437
Gene position: 3532720-3531722 (Counterclockwise)
Preceding gene: 187930438
Following gene: 187930433
Centisome position: 89.6
GC content: 65.17
Gene sequence:
>999_bases ATGACTTCCGCACGTACTGCCCGCCGTCGTCTGATTGCTTCTGCTGCGCTACTGTGCGCCGGTCTGCCGTTGCTTGCTGC TGCGCCGGTGCAAGCGCAGGACTATCCGGCCAAGCCGATCCGCATCATCGTCGCCTATCCGACTGGTGGCATTTCCGACA ACGTGGCGCGTGCACTGGGTGAAAAGCTGTCGGCGCAACTGGGCCAGCCGGTGGTGGTGGAAAACCGCGCCGGTGCCGGC GGCAGCATCGGCATGGATGCCGTGGCCAAGTCGGCCCCCGATGGCTACACGTTGGGCTTCTCATCGGTCAGCCCGCTCAC GCTCAACCCGCATTTCAGCAAGCTGCCGTATGACCCGCAGAAAGACATCGCGCCCGTGGCCAATGTCATGTATGCGCCGA TGATCCTGCTGGGCACGCCGTCGTTCACAGGCAAGAGCTTTGCCGACATGCTGAGCCAGTCGCGCACCAAACCGGGCTCG ATCCGCTGGTCGACATCGGGCCTGGGTACGGTGGGGCATCTCGCGCTGGAGCAGATCAAGTCGCAGGCGCACGTCGATAT CACGCTCATCCCGTACAAGGGCGGTGGCCAGCAATTGACGGATGCGCTGGGCGGCCAAGTGGAAGTCATGTCGACCAACG TCGGTCCGACCTTGATGCAACACATCACCAGCGGCAAGCTGCGCCCGCTGGCGGTGGGGGCGCCGCACCGGCTCGATGCG CTGCCGAATGTGCCGACCTTCACCGAGCTGGGTTACGCCAAGGCGAATATGGCGTCGACCTTTGGCGTGTTCGCGCCGGC CAAGACGCCAGCCCCCGTGATTGCCCGGTTGAATGCAGAGATCAACAAGGCGCTGGCTGCGCCCGATCTGCGCGAGCGTC TTACGCAGGCCGCCGTGGTGCCGGCCGGCGGCACCGCCGAGCAATTTGCCGCGGCCATCCGCGCGGAATACGACAGCAAC GGCCGCATCGTGCGCGCCGCCGGCATCAAGGAACAGTAA
Upstream 100 bases:
>100_bases CCTTTTCTTTTGCCTGCCGTTTTTGTATTTCGCCGGGGCGAGCTTGCCTGGGCATCGGCCTACAATGTTTCTTTCCGTTT CTTTCCTCCGACATTGCGCC
Downstream 100 bases:
>100_bases GCCGACTTACGCCGTAAACCGGTACCCCACGCCGACTTCGGTCAGCAGGTGTTCGGGCCGCGCCGGATCGCGTTCCAGCT TGTGGCGCAGATGGCCCATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MTSARTARRRLIASAALLCAGLPLLAAAPVQAQDYPAKPIRIIVAYPTGGISDNVARALGEKLSAQLGQPVVVENRAGAG GSIGMDAVAKSAPDGYTLGFSSVSPLTLNPHFSKLPYDPQKDIAPVANVMYAPMILLGTPSFTGKSFADMLSQSRTKPGS IRWSTSGLGTVGHLALEQIKSQAHVDITLIPYKGGGQQLTDALGGQVEVMSTNVGPTLMQHITSGKLRPLAVGAPHRLDA LPNVPTFTELGYAKANMASTFGVFAPAKTPAPVIARLNAEINKALAAPDLRERLTQAAVVPAGGTAEQFAAAIRAEYDSN GRIVRAAGIKEQ
Sequences:
>Translated_332_residues MTSARTARRRLIASAALLCAGLPLLAAAPVQAQDYPAKPIRIIVAYPTGGISDNVARALGEKLSAQLGQPVVVENRAGAG GSIGMDAVAKSAPDGYTLGFSSVSPLTLNPHFSKLPYDPQKDIAPVANVMYAPMILLGTPSFTGKSFADMLSQSRTKPGS IRWSTSGLGTVGHLALEQIKSQAHVDITLIPYKGGGQQLTDALGGQVEVMSTNVGPTLMQHITSGKLRPLAVGAPHRLDA LPNVPTFTELGYAKANMASTFGVFAPAKTPAPVIARLNAEINKALAAPDLRERLTQAAVVPAGGTAEQFAAAIRAEYDSN GRIVRAAGIKEQ >Mature_331_residues TSARTARRRLIASAALLCAGLPLLAAAPVQAQDYPAKPIRIIVAYPTGGISDNVARALGEKLSAQLGQPVVVENRAGAGG SIGMDAVAKSAPDGYTLGFSSVSPLTLNPHFSKLPYDPQKDIAPVANVMYAPMILLGTPSFTGKSFADMLSQSRTKPGSI RWSTSGLGTVGHLALEQIKSQAHVDITLIPYKGGGQQLTDALGGQVEVMSTNVGPTLMQHITSGKLRPLAVGAPHRLDAL PNVPTFTELGYAKANMASTFGVFAPAKTPAPVIARLNAEINKALAAPDLRERLTQAAVVPAGGTAEQFAAAIRAEYDSNG RIVRAAGIKEQ
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34507; Mature: 34376
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSARTARRRLIASAALLCAGLPLLAAAPVQAQDYPAKPIRIIVAYPTGGISDNVARALG CCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHH EKLSAQLGQPVVVENRAGAGGSIGMDAVAKSAPDGYTLGFSSVSPLTLNPHFSKLPYDPQ HHHHHHCCCCEEEECCCCCCCCCCHHHHHHCCCCCEEECCCCCCCEEECCCCCCCCCCCC KDIAPVANVMYAPMILLGTPSFTGKSFADMLSQSRTKPGSIRWSTSGLGTVGHLALEQIK HHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHH SQAHVDITLIPYKGGGQQLTDALGGQVEVMSTNVGPTLMQHITSGKLRPLAVGAPHRLDA HCCCEEEEEEEECCCCHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCEEEECCCHHHCC LPNVPTFTELGYAKANMASTFGVFAPAKTPAPVIARLNAEINKALAAPDLRERLTQAAVV CCCCCCHHHHCCHHHHHHHHHCEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHEEC PAGGTAEQFAAAIRAEYDSNGRIVRAAGIKEQ CCCCCHHHHHHHHHHHCCCCCCEEEECCCCCC >Mature Secondary Structure TSARTARRRLIASAALLCAGLPLLAAAPVQAQDYPAKPIRIIVAYPTGGISDNVARALG CCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHH EKLSAQLGQPVVVENRAGAGGSIGMDAVAKSAPDGYTLGFSSVSPLTLNPHFSKLPYDPQ HHHHHHCCCCEEEECCCCCCCCCCHHHHHHCCCCCEEECCCCCCCEEECCCCCCCCCCCC KDIAPVANVMYAPMILLGTPSFTGKSFADMLSQSRTKPGSIRWSTSGLGTVGHLALEQIK HHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHH SQAHVDITLIPYKGGGQQLTDALGGQVEVMSTNVGPTLMQHITSGKLRPLAVGAPHRLDA HCCCEEEEEEEECCCCHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCEEEECCCHHHCC LPNVPTFTELGYAKANMASTFGVFAPAKTPAPVIARLNAEINKALAAPDLRERLTQAAVV CCCCCCHHHHCCHHHHHHHHHCEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHEEC PAGGTAEQFAAAIRAEYDSNGRIVRAAGIKEQ CCCCCHHHHHHHHHHHCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11111902; 12910271; 2873570 [H]