| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is pssA [H]
Identifier: 187929303
GI number: 187929303
Start: 2335267
End: 2336139
Strand: Reverse
Name: pssA [H]
Synonym: Rpic_2224
Alternate gene names: 187929303
Gene position: 2336139-2335267 (Counterclockwise)
Preceding gene: 187929304
Following gene: 187929302
Centisome position: 59.25
GC content: 62.89
Gene sequence:
>873_bases ATGCCCGCGTTCAACCGACGCAAGAAGCGTTTTACCGCCGGCAACGTGACGCACCTGCGTCCGCTGCGGCACAACCAGCC GCGCTCGGATGACGACGATCTGGAGATCGTGCGTCCGCGCCGCAGAGGCATCTATCTGCTACCCAACGCGTTCACGACGG CCGCGCTGTTCGCCGGCTTCTTCGCCATCGTGCAGGCGATGAACCTGAACTTTGAGACGGCCGCGATCGCCATCTTTGCG GCGATGGTGCTCGATGGCATGGACGGCCGCGTCGCCCGCATCACCAATACCCAGAGCGCGTTCGGCGAGCAATACGACTC GCTGTCGGACATGGTGTCCTTCGGCGTAGCGCCGGCGTTGGTCATGTATGAATGGATCCTGCGCGATCTGGGCAAGTGGG GCTGGCTCGCTGCGTTCGTGTATTGCGCCGGCGCTGCATTGCGTCTCGCGCGCTTCAACACGAACATCGGATCGGTCGAC AAGCGCTTCTTCCAGGGCATGCCTAGCCCGGCCGCCGCTGCGCTCATCGCAGGTTTTGTCTGGCTGGCGATCGACAACAA GCTGCCGGTCAAAGAGCTGTGGATGCCGTGGGTAGCCTTCGGGCTGACGCTGTATGCAGGGCTGTCGATGGTGTCGAACG CGCCGTTTTACAGCGGCAAGGCGCTCGATGTTCGCCACCGCGTACCGTTCGGCGTGATGGTGCTCGTGCTTGTGTTATTC GTCGTGATATCCAGCGATCCGCCGGTGGCGTTGTTCGGCCTGTTTGTTGGCTACGCGGTGTCGGGCTACCTGCTGTGGGG GTGGCGCGCGCTGCATGGGCAACAAGGTAGCCCCCGTTTGCCAAAGCAGGCATCGGACGAAGCACATGAGTGA
Upstream 100 bases:
>100_bases GTGTACCTGCCGCTGACGGCGCGTCCACGCGTGACCATCGGCGAGAAGGTATCCGCCACGCTTACGGTGCTTGCTGAGCT GGACTGATCCGGAGGTCGCC
Downstream 100 bases:
>100_bases CCCATGCGCTGCACCATTGTGCGCTTGCGTCAATTTTTGAATTCGTCTATAGTCATTCGTATGCTTTCGCGCCCGATTTC CATTCTGATTACGCTAGTCT
Product: CDP-diacylglycerol/serine O-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MPAFNRRKKRFTAGNVTHLRPLRHNQPRSDDDDLEIVRPRRRGIYLLPNAFTTAALFAGFFAIVQAMNLNFETAAIAIFA AMVLDGMDGRVARITNTQSAFGEQYDSLSDMVSFGVAPALVMYEWILRDLGKWGWLAAFVYCAGAALRLARFNTNIGSVD KRFFQGMPSPAAAALIAGFVWLAIDNKLPVKELWMPWVAFGLTLYAGLSMVSNAPFYSGKALDVRHRVPFGVMVLVLVLF VVISSDPPVALFGLFVGYAVSGYLLWGWRALHGQQGSPRLPKQASDEAHE
Sequences:
>Translated_290_residues MPAFNRRKKRFTAGNVTHLRPLRHNQPRSDDDDLEIVRPRRRGIYLLPNAFTTAALFAGFFAIVQAMNLNFETAAIAIFA AMVLDGMDGRVARITNTQSAFGEQYDSLSDMVSFGVAPALVMYEWILRDLGKWGWLAAFVYCAGAALRLARFNTNIGSVD KRFFQGMPSPAAAALIAGFVWLAIDNKLPVKELWMPWVAFGLTLYAGLSMVSNAPFYSGKALDVRHRVPFGVMVLVLVLF VVISSDPPVALFGLFVGYAVSGYLLWGWRALHGQQGSPRLPKQASDEAHE >Mature_289_residues PAFNRRKKRFTAGNVTHLRPLRHNQPRSDDDDLEIVRPRRRGIYLLPNAFTTAALFAGFFAIVQAMNLNFETAAIAIFAA MVLDGMDGRVARITNTQSAFGEQYDSLSDMVSFGVAPALVMYEWILRDLGKWGWLAAFVYCAGAALRLARFNTNIGSVDK RFFQGMPSPAAAALIAGFVWLAIDNKLPVKELWMPWVAFGLTLYAGLSMVSNAPFYSGKALDVRHRVPFGVMVLVLVLFV VISSDPPVALFGLFVGYAVSGYLLWGWRALHGQQGSPRLPKQASDEAHE
Specific function: Unknown
COG id: COG1183
COG function: function code I; Phosphatidylserine synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320864, Length=196, Percent_Identity=30.6122448979592, Blast_Score=84, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004533 - InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 32077; Mature: 31945
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAFNRRKKRFTAGNVTHLRPLRHNQPRSDDDDLEIVRPRRRGIYLLPNAFTTAALFAGF CCCCCCHHHHCCCCCCCEECCCCCCCCCCCCCCHHEECCCCCCEEECCCHHHHHHHHHHH FAIVQAMNLNFETAAIAIFAAMVLDGMDGRVARITNTQSAFGEQYDSLSDMVSFGVAPAL HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHH VMYEWILRDLGKWGWLAAFVYCAGAALRLARFNTNIGSVDKRFFQGMPSPAAAALIAGFV HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHH WLAIDNKLPVKELWMPWVAFGLTLYAGLSMVSNAPFYSGKALDVRHRVPFGVMVLVLVLF HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHCCCHHHHHHHHHHH VVISSDPPVALFGLFVGYAVSGYLLWGWRALHGQQGSPRLPKQASDEAHE HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PAFNRRKKRFTAGNVTHLRPLRHNQPRSDDDDLEIVRPRRRGIYLLPNAFTTAALFAGF CCCCCHHHHCCCCCCCEECCCCCCCCCCCCCCHHEECCCCCCEEECCCHHHHHHHHHHH FAIVQAMNLNFETAAIAIFAAMVLDGMDGRVARITNTQSAFGEQYDSLSDMVSFGVAPAL HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHH VMYEWILRDLGKWGWLAAFVYCAGAALRLARFNTNIGSVDKRFFQGMPSPAAAALIAGFV HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHH WLAIDNKLPVKELWMPWVAFGLTLYAGLSMVSNAPFYSGKALDVRHRVPFGVMVLVLVLF HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHCCCHHHHHHHHHHH VVISSDPPVALFGLFVGYAVSGYLLWGWRALHGQQGSPRLPKQASDEAHE HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]