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The map label for this gene is ydiS [C]

Identifier: 187929066

GI number: 187929066

Start: 2095017

End: 2096702

Strand: Direct

Name: ydiS [C]

Synonym: Rpic_1986

Alternate gene names: 187929066

Gene position: 2095017-2096702 (Clockwise)

Preceding gene: 187929064

Following gene: 187929071

Centisome position: 53.14

GC content: 63.11

Gene sequence:

>1686_bases
ATGAACCAGCAGCAGCTCCTCGAACAATACGGCCCGCGAGAGTCCATGGAGTATGACGTCGTTATCGTCGGCGGCGGCCC
CGCCGGCCTGGCGACTGCGATTCGCGTCAAGCAACTGGCTGCCGAGACGGGCAAGGACGTGTCCGTCGTCGTGCTGGAAA
AGGGTTCCGAGCCGGGTGCACACATTCTTTCGGGCGCTGTGATGGACCCGCGCGCCATCAACGAACTCCTCCCGAACTGG
AAGGCCGACGGCGCCCCGCTCAACCAGGCGGTCACCGGCGACGATGTGCTCTTCCTGAGCGAAACCGGCTCCAAGCGTAC
GCCCGACTGGCTCGTGCCGCGCAACTTCCATAACCACGGCTGCTACGTGATCTCGCTGTCGAACGTGGTCAAGTGGATGG
CCACGCAGGCCGAAGCGCTGGGCGTCGAGATTTTCCCGGGCTTTGCGGCAGCCGAAGTGCTGTATGACGACAATGGTGCC
GTGCGCGGCGTTGCCACCGGCAACATGGGCATCGGCAAGGACGGTGAGCCGACCGAGAACTTCCAGCTCGGCATGGAGCT
GCTCGGCAAGTACACCATCTTCGCGGAAGGCGCGCGCGGGCATCTCGGCCGCCAGTTGCTGGAGAAGTTCAAGCTCAACG
CCGGCAAGGACCCGCAGACCTTCGCCATCGGTATCAAGGAACTCTGGGAAATCGATCCGGCCAAGGCCAAGCCCGGCCTC
GTGGTGCACACCGCGGGCTGGCCGATGGAAGATGACACCTTCGGCGGCGGCTTCCTGTATCACCTGGAAGACAACAAGAT
CACGCTCGGCTTCGTGATTGGGCTGGACTACAAGAACCCTTGGATGAGCCCGTTCGAAGAGATGCAGCGCTGGAAGGCCC
ACCCCGCCATCCGCGCGCACATCGAAGGCGGGAAGCGCATCGGCTACGGTGCACGCGCCATCAACAACGGCACGCCGCAG
GCGCTGCCGAAAACGGTGTTCCCAGGCGGCGCCCTGGTCGGTTGCGATGCAGGCTACCTGAACGCGGCGCGTATCAAGGG
CAGCCACGCGGCCATTAAGAGCGGCATGATGTGCGGTGAAGCCGTGTTCGAAGCCGTGACCGCTGGCCGCTGCGCAGACG
AGTTGTCGGCCTACCCCGCCGCCTTCGAACAGAGCTGGCTGAAGGAAGAACTGGACCAGTCGCGCAACTTCAAGCTGTGG
TTCAAGAAGAGCCCGACACTGGGCAAGATCATGACCGGCATCGAACAGTGGCTGCTGCCCAAGATTGGCGTCAGCAACCC
ACCTTGGACGCTGCACGGCACGAAGTCGGACAACCAGTCGCTCAAGCCGGCATCGGAATGCCCGAAGATCGAGTATCCGA
AGCCGGACGGCAAGGTCACGTTCGATCGCCTGTCGTCGGTGTTCATCTCGAACACGAACCACGAAGAGAACCAGCCGGCT
CACCTGACGCTGAAGGATCCGACCGTTCCGACGCGCATCAACCTGACGCAGTTTGCCGGCCCCGAGCAGCGCTACTGCCC
GGCTGGCGTGTATGAGTTCGTCAAGAACGATGAGGGCACTGAGCGCCTGCAGATCAACGCGCAGAACTGCGTGCACTGCA
AGACCTGCGACATCAAGGACCCGACGCAGAACATTGTGTGGGTCACCCCGGAAGGCGGTGGCGGGCCGAACTACGTCGGC
ATGTAA

Upstream 100 bases:

>100_bases
TCCCTTGCCGCATCCGGGCGTGTCCCGGACAATGCGGAAAATTCTAATGCAGCAATCCGTCATACCAATAAGCAAACGCC
CTACAAGCGAAGAGACACTT

Downstream 100 bases:

>100_bases
GCACCGGGCGGTCGCCCAACAAAAAAGACGGCTTGAAGCCGTCTTTTTTGTTGTCTGCGCAAATCGATTCAGGAAGCTTT
TGCCGGAATGGCCGGCGTCT

Product: electron-transferring-flavoprotein dehydrogenase

Products: NA

Alternate protein names: ETF-QO; ETF-ubiquinone oxidoreductase; Electron-transferring-flavoprotein dehydrogenase; ETF dehydrogenase [H]

Number of amino acids: Translated: 561; Mature: 561

Protein sequence:

>561_residues
MNQQQLLEQYGPRESMEYDVVIVGGGPAGLATAIRVKQLAAETGKDVSVVVLEKGSEPGAHILSGAVMDPRAINELLPNW
KADGAPLNQAVTGDDVLFLSETGSKRTPDWLVPRNFHNHGCYVISLSNVVKWMATQAEALGVEIFPGFAAAEVLYDDNGA
VRGVATGNMGIGKDGEPTENFQLGMELLGKYTIFAEGARGHLGRQLLEKFKLNAGKDPQTFAIGIKELWEIDPAKAKPGL
VVHTAGWPMEDDTFGGGFLYHLEDNKITLGFVIGLDYKNPWMSPFEEMQRWKAHPAIRAHIEGGKRIGYGARAINNGTPQ
ALPKTVFPGGALVGCDAGYLNAARIKGSHAAIKSGMMCGEAVFEAVTAGRCADELSAYPAAFEQSWLKEELDQSRNFKLW
FKKSPTLGKIMTGIEQWLLPKIGVSNPPWTLHGTKSDNQSLKPASECPKIEYPKPDGKVTFDRLSSVFISNTNHEENQPA
HLTLKDPTVPTRINLTQFAGPEQRYCPAGVYEFVKNDEGTERLQINAQNCVHCKTCDIKDPTQNIVWVTPEGGGGPNYVG
M

Sequences:

>Translated_561_residues
MNQQQLLEQYGPRESMEYDVVIVGGGPAGLATAIRVKQLAAETGKDVSVVVLEKGSEPGAHILSGAVMDPRAINELLPNW
KADGAPLNQAVTGDDVLFLSETGSKRTPDWLVPRNFHNHGCYVISLSNVVKWMATQAEALGVEIFPGFAAAEVLYDDNGA
VRGVATGNMGIGKDGEPTENFQLGMELLGKYTIFAEGARGHLGRQLLEKFKLNAGKDPQTFAIGIKELWEIDPAKAKPGL
VVHTAGWPMEDDTFGGGFLYHLEDNKITLGFVIGLDYKNPWMSPFEEMQRWKAHPAIRAHIEGGKRIGYGARAINNGTPQ
ALPKTVFPGGALVGCDAGYLNAARIKGSHAAIKSGMMCGEAVFEAVTAGRCADELSAYPAAFEQSWLKEELDQSRNFKLW
FKKSPTLGKIMTGIEQWLLPKIGVSNPPWTLHGTKSDNQSLKPASECPKIEYPKPDGKVTFDRLSSVFISNTNHEENQPA
HLTLKDPTVPTRINLTQFAGPEQRYCPAGVYEFVKNDEGTERLQINAQNCVHCKTCDIKDPTQNIVWVTPEGGGGPNYVG
M
>Mature_561_residues
MNQQQLLEQYGPRESMEYDVVIVGGGPAGLATAIRVKQLAAETGKDVSVVVLEKGSEPGAHILSGAVMDPRAINELLPNW
KADGAPLNQAVTGDDVLFLSETGSKRTPDWLVPRNFHNHGCYVISLSNVVKWMATQAEALGVEIFPGFAAAEVLYDDNGA
VRGVATGNMGIGKDGEPTENFQLGMELLGKYTIFAEGARGHLGRQLLEKFKLNAGKDPQTFAIGIKELWEIDPAKAKPGL
VVHTAGWPMEDDTFGGGFLYHLEDNKITLGFVIGLDYKNPWMSPFEEMQRWKAHPAIRAHIEGGKRIGYGARAINNGTPQ
ALPKTVFPGGALVGCDAGYLNAARIKGSHAAIKSGMMCGEAVFEAVTAGRCADELSAYPAAFEQSWLKEELDQSRNFKLW
FKKSPTLGKIMTGIEQWLLPKIGVSNPPWTLHGTKSDNQSLKPASECPKIEYPKPDGKVTFDRLSSVFISNTNHEENQPA
HLTLKDPTVPTRINLTQFAGPEQRYCPAGVYEFVKNDEGTERLQINAQNCVHCKTCDIKDPTQNIVWVTPEGGGGPNYVG
M

Specific function: Accepts electrons from ETF and reduces ubiquinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=566, Percent_Identity=52.8268551236749, Blast_Score=597, Evalue=1e-170,
Organism=Escherichia coli, GI1787991, Length=411, Percent_Identity=27.7372262773723, Blast_Score=113, Evalue=3e-26,
Organism=Escherichia coli, GI1786227, Length=331, Percent_Identity=27.4924471299094, Blast_Score=99, Evalue=7e-22,
Organism=Escherichia coli, GI87082155, Length=381, Percent_Identity=25.7217847769029, Blast_Score=90, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI25144720, Length=559, Percent_Identity=53.1305903398927, Blast_Score=596, Evalue=1e-170,
Organism=Saccharomyces cerevisiae, GI6324932, Length=589, Percent_Identity=43.2937181663837, Blast_Score=469, Evalue=1e-133,
Organism=Drosophila melanogaster, GI24652256, Length=557, Percent_Identity=54.7576301615799, Blast_Score=604, Evalue=1e-173,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR007859
- InterPro:   IPR003042 [H]

Pfam domain/function: PF05187 ETF_QO [H]

EC number: =1.5.5.1 [H]

Molecular weight: Translated: 61074; Mature: 61074

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQQQLLEQYGPRESMEYDVVIVGGGPAGLATAIRVKQLAAETGKDVSVVVLEKGSEPGA
CCHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCH
HILSGAVMDPRAINELLPNWKADGAPLNQAVTGDDVLFLSETGSKRTPDWLVPRNFHNHG
HHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
CYVISLSNVVKWMATQAEALGVEIFPGFAAAEVLYDDNGAVRGVATGNMGIGKDGEPTEN
EEEEEHHHHHHHHHHHHHHCCEEEECCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCHH
FQLGMELLGKYTIFAEGARGHLGRQLLEKFKLNAGKDPQTFAIGIKELWEIDPAKAKPGL
HHHHHHHHCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEECHHHHHCCCCCCCCCCE
VVHTAGWPMEDDTFGGGFLYHLEDNKITLGFVIGLDYKNPWMSPFEEMQRWKAHPAIRAH
EEEECCCCCCCCCCCCEEEEEEECCEEEEEEEEEECCCCCCCCHHHHHHHHHCCCCEEEE
IEGGKRIGYGARAINNGTPQALPKTVFPGGALVGCDAGYLNAARIKGSHAAIKSGMMCGE
ECCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEECCCHHHHHHCCHHHH
AVFEAVTAGRCADELSAYPAAFEQSWLKEELDQSRNFKLWFKKSPTLGKIMTGIEQWLLP
HHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCC
KIGVSNPPWTLHGTKSDNQSLKPASECPKIEYPKPDGKVTFDRLSSVFISNTNHEENQPA
CCCCCCCCEEEECCCCCCCCCCCHHHCCCCCCCCCCCCEEHHHHHHHEEECCCCCCCCCC
HLTLKDPTVPTRINLTQFAGPEQRYCPAGVYEFVKNDEGTERLQINAQNCVHCKTCDIKD
EEEECCCCCCCEEEHHHCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCC
PTQNIVWVTPEGGGGPNYVGM
CCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MNQQQLLEQYGPRESMEYDVVIVGGGPAGLATAIRVKQLAAETGKDVSVVVLEKGSEPGA
CCHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCH
HILSGAVMDPRAINELLPNWKADGAPLNQAVTGDDVLFLSETGSKRTPDWLVPRNFHNHG
HHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
CYVISLSNVVKWMATQAEALGVEIFPGFAAAEVLYDDNGAVRGVATGNMGIGKDGEPTEN
EEEEEHHHHHHHHHHHHHHCCEEEECCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCHH
FQLGMELLGKYTIFAEGARGHLGRQLLEKFKLNAGKDPQTFAIGIKELWEIDPAKAKPGL
HHHHHHHHCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEECHHHHHCCCCCCCCCCE
VVHTAGWPMEDDTFGGGFLYHLEDNKITLGFVIGLDYKNPWMSPFEEMQRWKAHPAIRAH
EEEECCCCCCCCCCCCEEEEEEECCEEEEEEEEEECCCCCCCCHHHHHHHHHCCCCEEEE
IEGGKRIGYGARAINNGTPQALPKTVFPGGALVGCDAGYLNAARIKGSHAAIKSGMMCGE
ECCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEECCCHHHHHHCCHHHH
AVFEAVTAGRCADELSAYPAAFEQSWLKEELDQSRNFKLWFKKSPTLGKIMTGIEQWLLP
HHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCC
KIGVSNPPWTLHGTKSDNQSLKPASECPKIEYPKPDGKVTFDRLSSVFISNTNHEENQPA
CCCCCCCCEEEECCCCCCCCCCCHHHCCCCCCCCCCCCEEHHHHHHHEEECCCCCCCCCC
HLTLKDPTVPTRINLTQFAGPEQRYCPAGVYEFVKNDEGTERLQINAQNCVHCKTCDIKD
EEEECCCCCCCEEEHHHCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCC
PTQNIVWVTPEGGGGPNYVGM
CCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]