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The map label for this gene is uhpA [C]

Identifier: 187929064

GI number: 187929064

Start: 2093462

End: 2094007

Strand: Direct

Name: uhpA [C]

Synonym: Rpic_1984

Alternate gene names: 187929064

Gene position: 2093462-2094007 (Clockwise)

Preceding gene: 187929047

Following gene: 187929066

Centisome position: 53.1

GC content: 61.9

Gene sequence:

>546_bases
ATGCCCGCCCTCGACTATCAGACTGCGTTCCAGCTTGCCCCTGTCGGCATGGTGATGTCCCGCGAGCGGGTGATGCTCGA
CGTCAATGACGAAGCCGCTCGCATCTTCGGCCACGCGCGTACCACCATGATCGGCCAATCGTTTGAACTGCTGTATCCAA
CGCACGACGAATACGAGCGCACCGGCGCGCGCATCATCCCCGTCATGAATGCGCGCGGCAGCTATTCTGACGAACGCATC
ATGAAGCGCGCCAACGGTGAACTGTTCTGGTGCCACGTCACAGGCCGCGCGCTGGACCGTGCCAAACCGCTGGGCGAAGG
CATCTGGACGTTCGAGGATCTGTCAGCGCATCGCCCCGTTACAGCAGCGCTCACGCCGCGCGAACGCGACATCGCCGCGC
AGCTTGTTGAAGGCAAGACCAGCAAGCAGATCGGCAAGCAGTTGGAGATCAGCCCGCGCACGGTTGAAATCTATCGCGCG
CGGCTGATGAAGAAGTACGCCGCCAACACCTCGCTCGAACTTGTGCAGCGGCTGATGGGGCATTGA

Upstream 100 bases:

>100_bases
ACACTTGGGGTTTGTGCGGTGCAGCGCCGGAAAATAGTAACGATACAATCTGGCGAGAATACGCAAGCGTCGCGCGACGC
AGCAATACGTACGAATACAT

Downstream 100 bases:

>100_bases
GGCCGCCGAAGCGTTACACCATGCCGTCGTCGGCGTTGATGACGGCACCGTTGATGAAGTCGGACTGATCCGACGCCAAC
AGCAGAATCAGCCCATCGAG

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator LuxR Family; Transcriptional Regulator; Two-Component Sensor; Sigma-70 Region 4 Family; PAS/PAC Sensor Protein; Transcriptional Regulator Luxr Family; Diguanylate Cyclase/Phosphodiesterase; Transcription Regulator Protein; LuxR Family Regulatory Protein; PAS Domain-Containing Protein

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MPALDYQTAFQLAPVGMVMSRERVMLDVNDEAARIFGHARTTMIGQSFELLYPTHDEYERTGARIIPVMNARGSYSDERI
MKRANGELFWCHVTGRALDRAKPLGEGIWTFEDLSAHRPVTAALTPRERDIAAQLVEGKTSKQIGKQLEISPRTVEIYRA
RLMKKYAANTSLELVQRLMGH

Sequences:

>Translated_181_residues
MPALDYQTAFQLAPVGMVMSRERVMLDVNDEAARIFGHARTTMIGQSFELLYPTHDEYERTGARIIPVMNARGSYSDERI
MKRANGELFWCHVTGRALDRAKPLGEGIWTFEDLSAHRPVTAALTPRERDIAAQLVEGKTSKQIGKQLEISPRTVEIYRA
RLMKKYAANTSLELVQRLMGH
>Mature_180_residues
PALDYQTAFQLAPVGMVMSRERVMLDVNDEAARIFGHARTTMIGQSFELLYPTHDEYERTGARIIPVMNARGSYSDERIM
KRANGELFWCHVTGRALDRAKPLGEGIWTFEDLSAHRPVTAALTPRERDIAAQLVEGKTSKQIGKQLEISPRTVEIYRAR
LMKKYAANTSLELVQRLMGH

Specific function: Appears To Be The Positive Activator Of Uhpt Transcription. [C]

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20521; Mature: 20390

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPALDYQTAFQLAPVGMVMSRERVMLDVNDEAARIFGHARTTMIGQSFELLYPTHDEYER
CCCCCCHHHHHHCCHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCEEEECCCCHHHHH
TGARIIPVMNARGSYSDERIMKRANGELFWCHVTGRALDRAKPLGEGIWTFEDLSAHRPV
CCCEEEEEECCCCCCCHHHHHHHCCCCEEEEEECCCHHHHCCCCCCCCCCHHHHCCCCCE
TAALTPRERDIAAQLVEGKTSKQIGKQLEISPRTVEIYRARLMKKYAANTSLELVQRLMG
EEEECCCHHHHHHHHHCCCCHHHHCCEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHC
H
C
>Mature Secondary Structure 
PALDYQTAFQLAPVGMVMSRERVMLDVNDEAARIFGHARTTMIGQSFELLYPTHDEYER
CCCCCHHHHHHCCHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCEEEECCCCHHHHH
TGARIIPVMNARGSYSDERIMKRANGELFWCHVTGRALDRAKPLGEGIWTFEDLSAHRPV
CCCEEEEEECCCCCCCHHHHHHHCCCCEEEEEECCCHHHHCCCCCCCCCCHHHHCCCCCE
TAALTPRERDIAAQLVEGKTSKQIGKQLEISPRTVEIYRARLMKKYAANTSLELVQRLMG
EEEECCCHHHHHHHHHCCCCHHHHCCEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHC
H
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA