Definition Ralstonia pickettii 12J chromosome chromosome 1, complete sequence.
Accession NC_010682
Length 3,942,557

Click here to switch to the map view.

The map label for this gene is yeaD [C]

Identifier: 187929045

GI number: 187929045

Start: 2075576

End: 2076514

Strand: Direct

Name: yeaD [C]

Synonym: Rpic_1965

Alternate gene names: 187929045

Gene position: 2075576-2076514 (Clockwise)

Preceding gene: 187929033

Following gene: 187929047

Centisome position: 52.65

GC content: 66.56

Gene sequence:

>939_bases
ATGCACGACCTGCCCACCGCCTGCTTCCAGGACCGCACGCTCATCCGCATCGGCGAGCCGCACACCGATGGCTCCATGCT
GCTGCTCGCGCCTGAAGCCGGCGGCCGGCTGGTGCGCTGGCGCCATCGCGGCGAAGACATCCTCTTCTGGCCCGAGCCGG
CCGATTGGTCCAATCCGGCCAAGGTCCGTGGCGGCAATCCGCTGCTGTTTCCCTTCATCGGCCGGCATTTCGTGGAGGGC
GAAGTCGGCCGCTGGCGCGATGCGCGCGGTCGACTTTACACACTGCCGCAGCACGGCTTCGCCCGCGACTTGCCGTTCGA
GGTGGAAGACGCAAGCGATGCGCACATCGTCCTGTTGCTGCGCGACAGCCCCCACACGCGCCAAGGCTATCCGTTCGCCT
TTGAATTTCGCGTGACGTACCAACTGATCCACGATGGGCTGGAAGCAACCCTCTCCGTCAAGCATCTGGACGAAAGCGAC
GCGCATGCCCCGATGCCCTTCTACGCCGGTCATCATTTCTACCTGGCGCTCCCGCATGCATTGCGTGGCGCCACCGAGCT
GCTGATGCCGCCGGCTCGGCTGTCGCGCCAACTGCCCGATGGCAGTCTAGACAGACCCGAGCCAGGGCGCCGGACCTACC
AGCTCGACGACCCGGCGCTGCAAGACCGCTATCACCTGCTCGACGACACCGGCGTGGCCACGCTCGTCATCCCGCCGCAT
GCGCAAGCGCCGCTCGGCCGGCGCATTCGTATCGAGGTAGACGGCGCACCGGTGCCCTGGCACGCCATCACCACCTGGAC
AGAAAACGCCACGTCGGACTTCTACTGCGTCGAACCATGGATGGGCCTGCCGAATGCGATCCACCACGGCGAGGGCTTGC
ACCTGCTCGCGCCCGGTGAGACCCGACAGGCAACCTGTCGCATGCGGATCGCACGGTAG

Upstream 100 bases:

>100_bases
GCGGGCAGCACGCAATTGACGGACATGGTTTCCCTCCGGGCAAAACGCATTGACAATCTAGTACGCGATTCCCATGCCAA
CAAGTCACTCCACCCCAGCC

Downstream 100 bases:

>100_bases
CCGACGCGGTCAGGCCTTCTCGTAGGCCTGCACGGCGTCCATCACGCGCGCCGAGTACACCAACGCTGCCCCGGCATTGA
GCGAGATCGCCACGCTCAGC

Product: Aldose 1-epimerase

Products: NA

Alternate protein names: Galactose Mutarotase-Like Protein; Aldose 1-Epimerase Family Protein; Galactose Mutarotase; Galactose Mutarotase ; Aldose 1-Epimerase Subfamily Protein; Aldose 1-Epimerase Subfamily; Aldose 1-Epimerase/Galactose Mutarotase; LacX Protein; Aldose-1 Epimerase; Galactose Mutarotase-Related; Aldose Epimerase; Aldose Epimerase Or Galactose Mutarotase

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MHDLPTACFQDRTLIRIGEPHTDGSMLLLAPEAGGRLVRWRHRGEDILFWPEPADWSNPAKVRGGNPLLFPFIGRHFVEG
EVGRWRDARGRLYTLPQHGFARDLPFEVEDASDAHIVLLLRDSPHTRQGYPFAFEFRVTYQLIHDGLEATLSVKHLDESD
AHAPMPFYAGHHFYLALPHALRGATELLMPPARLSRQLPDGSLDRPEPGRRTYQLDDPALQDRYHLLDDTGVATLVIPPH
AQAPLGRRIRIEVDGAPVPWHAITTWTENATSDFYCVEPWMGLPNAIHHGEGLHLLAPGETRQATCRMRIAR

Sequences:

>Translated_312_residues
MHDLPTACFQDRTLIRIGEPHTDGSMLLLAPEAGGRLVRWRHRGEDILFWPEPADWSNPAKVRGGNPLLFPFIGRHFVEG
EVGRWRDARGRLYTLPQHGFARDLPFEVEDASDAHIVLLLRDSPHTRQGYPFAFEFRVTYQLIHDGLEATLSVKHLDESD
AHAPMPFYAGHHFYLALPHALRGATELLMPPARLSRQLPDGSLDRPEPGRRTYQLDDPALQDRYHLLDDTGVATLVIPPH
AQAPLGRRIRIEVDGAPVPWHAITTWTENATSDFYCVEPWMGLPNAIHHGEGLHLLAPGETRQATCRMRIAR
>Mature_312_residues
MHDLPTACFQDRTLIRIGEPHTDGSMLLLAPEAGGRLVRWRHRGEDILFWPEPADWSNPAKVRGGNPLLFPFIGRHFVEG
EVGRWRDARGRLYTLPQHGFARDLPFEVEDASDAHIVLLLRDSPHTRQGYPFAFEFRVTYQLIHDGLEATLSVKHLDESD
AHAPMPFYAGHHFYLALPHALRGATELLMPPARLSRQLPDGSLDRPEPGRRTYQLDDPALQDRYHLLDDTGVATLVIPPH
AQAPLGRRIRIEVDGAPVPWHAITTWTENATSDFYCVEPWMGLPNAIHHGEGLHLLAPGETRQATCRMRIAR

Specific function: Unknown

COG id: COG2017

COG function: function code G; Galactose mutarotase and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 560 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35290; Mature: 35290

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDLPTACFQDRTLIRIGEPHTDGSMLLLAPEAGGRLVRWRHRGEDILFWPEPADWSNPA
CCCCCCHHHCCCEEEEECCCCCCCCEEEEEECCCCCEEEEEECCCEEEECCCCCCCCCCC
KVRGGNPLLFPFIGRHFVEGEVGRWRDARGRLYTLPQHGFARDLPFEVEDASDAHIVLLL
EECCCCEEEHHHHCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCEEECCCCCCEEEEEE
RDSPHTRQGYPFAFEFRVTYQLIHDGLEATLSVKHLDESDAHAPMPFYAGHHFYLALPHA
CCCCCCCCCCCEEEEEEEEEEHHHCCHHHEEEEEECCCCCCCCCCCEECCCEEEEECCHH
LRGATELLMPPARLSRQLPDGSLDRPEPGRRTYQLDDPALQDRYHLLDDTGVATLVIPPH
HCCCHHHCCCHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHEEEECCCCEEEEEECCC
AQAPLGRRIRIEVDGAPVPWHAITTWTENATSDFYCVEPWMGLPNAIHHGEGLHLLAPGE
CCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCEEEECCCCCCCCHHCCCCCEEEECCCC
TRQATCRMRIAR
CCCEEEEEEECC
>Mature Secondary Structure
MHDLPTACFQDRTLIRIGEPHTDGSMLLLAPEAGGRLVRWRHRGEDILFWPEPADWSNPA
CCCCCCHHHCCCEEEEECCCCCCCCEEEEEECCCCCEEEEEECCCEEEECCCCCCCCCCC
KVRGGNPLLFPFIGRHFVEGEVGRWRDARGRLYTLPQHGFARDLPFEVEDASDAHIVLLL
EECCCCEEEHHHHCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCEEECCCCCCEEEEEE
RDSPHTRQGYPFAFEFRVTYQLIHDGLEATLSVKHLDESDAHAPMPFYAGHHFYLALPHA
CCCCCCCCCCCEEEEEEEEEEHHHCCHHHEEEEEECCCCCCCCCCCEECCCEEEEECCHH
LRGATELLMPPARLSRQLPDGSLDRPEPGRRTYQLDDPALQDRYHLLDDTGVATLVIPPH
HCCCHHHCCCHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHEEEECCCCEEEEEECCC
AQAPLGRRIRIEVDGAPVPWHAITTWTENATSDFYCVEPWMGLPNAIHHGEGLHLLAPGE
CCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCEEEECCCCCCCCHHCCCCCEEEECCCC
TRQATCRMRIAR
CCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA