| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928965
Identifier: 187928965
GI number: 187928965
Start: 1985172
End: 1985513
Strand: Direct
Name: 187928965
Synonym: Rpic_1884
Alternate gene names: NA
Gene position: 1985172-1985513 (Clockwise)
Preceding gene: 187928964
Following gene: 187928974
Centisome position: 50.35
GC content: 65.2
Gene sequence:
>342_bases ATGGCGTGCGCGCCTTTCAAAGACCCGAAGACCAGTCAACCAACCCACACACCCTTCTCCAGACTGTTCGCATTCGGCCT AGACCGCACCGTGCCGCCGCCCGCACACCCGCAGACCTCGCCAGCCTCCACCCCGCTGGCGTCGAGCGCGCTGCAACTGC TCAACAAACACCTCTACCAGGCCGACCGCTACACCGGCATGCTCATCGTCCTGCAGCACGACGACGCCAAAGAGCCCGCC GTCATCTCCTCCGGCACCTATCGGCACGAGCGCGCCCGCGCGCTGACTGATTTTGCGCGGGCGTCGGTGCAGATTTCGGA GTTGATTGAGGCGGGGGTGTAG
Upstream 100 bases:
>100_bases TCGATCACCTTCAGCGCGAGCAATCTGCTGAAATACCGGCAGTGAATGGCACCGCGGCGACGTCCTCCTAGATGAAGCCG CCGTGCAAGCTGTCCGGTCA
Downstream 100 bases:
>100_bases ACGCCAAACTGCGGGACGCATCGCTGGAGGCTTCGGCCATGCGATGCGGCGGTCAGAGTGGGACTTAAAGCAGGCGAGCG CGTGTGCTAAAGACAGCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MACAPFKDPKTSQPTHTPFSRLFAFGLDRTVPPPAHPQTSPASTPLASSALQLLNKHLYQADRYTGMLIVLQHDDAKEPA VISSGTYRHERARALTDFARASVQISELIEAGV
Sequences:
>Translated_113_residues MACAPFKDPKTSQPTHTPFSRLFAFGLDRTVPPPAHPQTSPASTPLASSALQLLNKHLYQADRYTGMLIVLQHDDAKEPA VISSGTYRHERARALTDFARASVQISELIEAGV >Mature_112_residues ACAPFKDPKTSQPTHTPFSRLFAFGLDRTVPPPAHPQTSPASTPLASSALQLLNKHLYQADRYTGMLIVLQHDDAKEPAV ISSGTYRHERARALTDFARASVQISELIEAGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12327; Mature: 12196
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACAPFKDPKTSQPTHTPFSRLFAFGLDRTVPPPAHPQTSPASTPLASSALQLLNKHLYQ CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH ADRYTGMLIVLQHDDAKEPAVISSGTYRHERARALTDFARASVQISELIEAGV HCCCCCEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ACAPFKDPKTSQPTHTPFSRLFAFGLDRTVPPPAHPQTSPASTPLASSALQLLNKHLYQ CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH ADRYTGMLIVLQHDDAKEPAVISSGTYRHERARALTDFARASVQISELIEAGV HCCCCCEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA