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The map label for this gene is yngJ [H]

Identifier: 187928530

GI number: 187928530

Start: 1531295

End: 1533163

Strand: Reverse

Name: yngJ [H]

Synonym: Rpic_1444

Alternate gene names: 187928530

Gene position: 1533163-1531295 (Counterclockwise)

Preceding gene: 187928531

Following gene: 187928529

Centisome position: 38.89

GC content: 63.24

Gene sequence:

>1869_bases
ATGTCCTCGAAACTGCTATCCCGCCGCGACCTCAGCTTCCTGCTCTACGAATGGCTCAACGTTGAGTCACTCACAAGCAT
TCCCCGTTACGCCGACCACTCCCGCGAAACCTTCGACGCCGCGCTCGACACCTGCGAGCGCATCGCAACGGATCTGTTTG
CTCCGCATAACAAGAAAAACGACCAAGAAGAACCGCACTTCGACGGCACCAAGGTCCACATCATTCCCGAGGTCAAGGCA
GCGCTGGACGCCTTCAACAAAGCGGGCCTGATGGCTGCCGGGCAAGACTTTGAACGTGGCGGCATGCAACTGCCCACGGT
GGTCGAAAAAGCCGGCTTCGGTTTCTTCAAGGCTGCCAACGTCGGCACCAGTTCGTATCCATTCCTCACCATCGGCAACG
CGAATCTGCTGCTCGCGCATGGCACGCCCGCGCAGATCGAAACGTTTGTACAGCCCGAGATGGAAGGCCGCTTCTACGGC
ACGATGTGCCTGTCGGAGCCGCAGGCCGGCTCGTCGCTCTCGGACATCGTCACGCGGGCCGAGTACGAGGGCGAATCGCC
GCTCGGCGCGCAGTACCGTTTAACCGGCAACAAGATGTGGATCTCCGCCGGTGAACATGAGCTGTCGGAAAACATCGTCC
ACCTTGTGCTGGCGAAGATCCCCGGCCCGGACGGCAAGCTGATTCCGGGCGTGAAGGGTATCTCGCTGTTCATCGTGCCG
AAGTTCCTCGTCAACGCCGATGGCTCGCTCGGCGAGCGCAATGACGTGGTGCTCGCCGGCCTGAACCACAAGATGGGCTA
TCGCGGCACGACCAACTGCCTGCTAAATTTTGGTGAGGGCACGCAGTTCCGTCCGAAGGGCGCAGATGGCCAGCCGCGCC
CTGGCGCCATCGGTTACCTCGTCGGCGAGCCGCACAAGGGTCTCGCATGCATGTTCCACATGATGAACGAGGCGCGCATC
GGCGTCGGCATGGGCGCAACGATGCTTGGCTACACGGGTTATCTGCACGCGGTGGACTACGCGCGCAATCGCCCGCAGGG
CCGCCCGGTCGGGCCATCGGGCAAGGATGCAGCATCTCCGCAGATCCGTATCGTCGATCACGCCGACGTGCGTCGCATGC
TGCTGGCGCAGAAGGCGTATGTGGAAGGCGCGCTCGGCTTGAACCTGTATTGCGCCAAGCTCGTCGATGAAGAACGCGGG
GAAACCGACGCAGCCAAACGCGCCAAGCTCGGTCTGCTGCTCGACATCCTCACGCCGATTGCCAAGAGTTGGCCGTCGCA
GTGGTGCCTGGAGGCCAACAGCCTGGCGATCCAGGTGCATGGCGGTTACGGCTACACGCGCGAATACAACGTCGAACAGT
TCTACCGCGACAACCGCCTGAACCCGATTCACGAAGGTACGCACGGCATCCAGGGCCTGGACCTGCTGGGCCGCAAGGTC
GTGATGCAGGACGGCGCTGCCTTCGCCGCGCTCGGTGAGCGCGTGCAGGCCACCGTCGGCCGTGCGTTGGAAACTGACGA
TGAAACGCTGGTCGGCTACGGCCGTGCGCTCGGCATGGCGACGCAGAAACTGGCCAAGGTCACGCAGACGCTGTGGGCCG
CCGGCGACCCGCGCGTGACGCTGGCGAATGCCTCGGTCTATCTGGAAGCGTTCGGCCACGTCGTCGTCGCGTGGATCTGG
CTGGAGCAGGCGCTGGCCGCCGCCAAGGCATTGCCGAACGCCCAAGGCGAAGACGCTGATTTCTACCGCGGCAAGCTGCA
GGCCGCGCGCTATTTCTTCCAGTGGGAACTGCCAAAGATCGACCCGCAGATCGTGCTGCTGGGCTCGCTCGACACGACCA
CGCTGGACATGCAGGACGCCTGGTTCTGA

Upstream 100 bases:

>100_bases
TGCGCCATCTCGGGCGCGCCTTCTTTGCTTACTTTCTTTGACAAGACAAAGAAAGTGAGTCGGCCCCGGCAGGGGACGAA
ACTCAGGATGCACCAACATC

Downstream 100 bases:

>100_bases
CGGCATCGCACAACCACAACGAGACACAGGAGACACCATGGGTACGCTGAAACACCTCTTCGATCTTTCCGGCAAGACGG
CGCTGATCACCGGCGGCTCG

Product: acyl-CoA dehydrogenase domain-containing protein

Products: 2-butenoyl-CoA; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 622; Mature: 621

Protein sequence:

>622_residues
MSSKLLSRRDLSFLLYEWLNVESLTSIPRYADHSRETFDAALDTCERIATDLFAPHNKKNDQEEPHFDGTKVHIIPEVKA
ALDAFNKAGLMAAGQDFERGGMQLPTVVEKAGFGFFKAANVGTSSYPFLTIGNANLLLAHGTPAQIETFVQPEMEGRFYG
TMCLSEPQAGSSLSDIVTRAEYEGESPLGAQYRLTGNKMWISAGEHELSENIVHLVLAKIPGPDGKLIPGVKGISLFIVP
KFLVNADGSLGERNDVVLAGLNHKMGYRGTTNCLLNFGEGTQFRPKGADGQPRPGAIGYLVGEPHKGLACMFHMMNEARI
GVGMGATMLGYTGYLHAVDYARNRPQGRPVGPSGKDAASPQIRIVDHADVRRMLLAQKAYVEGALGLNLYCAKLVDEERG
ETDAAKRAKLGLLLDILTPIAKSWPSQWCLEANSLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTHGIQGLDLLGRKV
VMQDGAAFAALGERVQATVGRALETDDETLVGYGRALGMATQKLAKVTQTLWAAGDPRVTLANASVYLEAFGHVVVAWIW
LEQALAAAKALPNAQGEDADFYRGKLQAARYFFQWELPKIDPQIVLLGSLDTTTLDMQDAWF

Sequences:

>Translated_622_residues
MSSKLLSRRDLSFLLYEWLNVESLTSIPRYADHSRETFDAALDTCERIATDLFAPHNKKNDQEEPHFDGTKVHIIPEVKA
ALDAFNKAGLMAAGQDFERGGMQLPTVVEKAGFGFFKAANVGTSSYPFLTIGNANLLLAHGTPAQIETFVQPEMEGRFYG
TMCLSEPQAGSSLSDIVTRAEYEGESPLGAQYRLTGNKMWISAGEHELSENIVHLVLAKIPGPDGKLIPGVKGISLFIVP
KFLVNADGSLGERNDVVLAGLNHKMGYRGTTNCLLNFGEGTQFRPKGADGQPRPGAIGYLVGEPHKGLACMFHMMNEARI
GVGMGATMLGYTGYLHAVDYARNRPQGRPVGPSGKDAASPQIRIVDHADVRRMLLAQKAYVEGALGLNLYCAKLVDEERG
ETDAAKRAKLGLLLDILTPIAKSWPSQWCLEANSLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTHGIQGLDLLGRKV
VMQDGAAFAALGERVQATVGRALETDDETLVGYGRALGMATQKLAKVTQTLWAAGDPRVTLANASVYLEAFGHVVVAWIW
LEQALAAAKALPNAQGEDADFYRGKLQAARYFFQWELPKIDPQIVLLGSLDTTTLDMQDAWF
>Mature_621_residues
SSKLLSRRDLSFLLYEWLNVESLTSIPRYADHSRETFDAALDTCERIATDLFAPHNKKNDQEEPHFDGTKVHIIPEVKAA
LDAFNKAGLMAAGQDFERGGMQLPTVVEKAGFGFFKAANVGTSSYPFLTIGNANLLLAHGTPAQIETFVQPEMEGRFYGT
MCLSEPQAGSSLSDIVTRAEYEGESPLGAQYRLTGNKMWISAGEHELSENIVHLVLAKIPGPDGKLIPGVKGISLFIVPK
FLVNADGSLGERNDVVLAGLNHKMGYRGTTNCLLNFGEGTQFRPKGADGQPRPGAIGYLVGEPHKGLACMFHMMNEARIG
VGMGATMLGYTGYLHAVDYARNRPQGRPVGPSGKDAASPQIRIVDHADVRRMLLAQKAYVEGALGLNLYCAKLVDEERGE
TDAAKRAKLGLLLDILTPIAKSWPSQWCLEANSLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTHGIQGLDLLGRKVV
MQDGAAFAALGERVQATVGRALETDDETLVGYGRALGMATQKLAKVTQTLWAAGDPRVTLANASVYLEAFGHVVVAWIWL
EQALAAAKALPNAQGEDADFYRGKLQAARYFFQWELPKIDPQIVLLGSLDTTTLDMQDAWF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=401, Percent_Identity=26.6832917705736, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI4501857, Length=347, Percent_Identity=26.8011527377522, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI226958412, Length=344, Percent_Identity=26.1627906976744, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI226958414, Length=344, Percent_Identity=26.1627906976744, Blast_Score=72, Evalue=2e-12,
Organism=Escherichia coli, GI87082384, Length=453, Percent_Identity=23.841059602649, Blast_Score=84, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17508101, Length=459, Percent_Identity=24.6187363834423, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17506239, Length=404, Percent_Identity=23.7623762376238, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI86563383, Length=339, Percent_Identity=26.2536873156342, Blast_Score=79, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI86563381, Length=339, Percent_Identity=26.2536873156342, Blast_Score=79, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI71985184, Length=452, Percent_Identity=24.1150442477876, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21356377, Length=464, Percent_Identity=27.5862068965517, Blast_Score=99, Evalue=8e-21,
Organism=Drosophila melanogaster, GI24646207, Length=440, Percent_Identity=26.1363636363636, Blast_Score=84, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: 1.3.99.2

Molecular weight: Translated: 67902; Mature: 67771

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSKLLSRRDLSFLLYEWLNVESLTSIPRYADHSRETFDAALDTCERIATDLFAPHNKKN
CCCCCCCCCCHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
DQEEPHFDGTKVHIIPEVKAALDAFNKAGLMAAGQDFERGGMQLPTVVEKAGFGFFKAAN
CCCCCCCCCCEEEEECHHHHHHHHHHHCCCEECCCCHHCCCCCCCHHHHHCCCCEEEECC
VGTSSYPFLTIGNANLLLAHGTPAQIETFVQPEMEGRFYGTMCLSEPQAGSSLSDIVTRA
CCCCCCCEEEECCCEEEEECCCCHHHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHHHHH
EYEGESPLGAQYRLTGNKMWISAGEHELSENIVHLVLAKIPGPDGKLIPGVKGISLFIVP
HCCCCCCCCCEEEEECCEEEEECCHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEEEEEE
KFLVNADGSLGERNDVVLAGLNHKMGYRGTTNCLLNFGEGTQFRPKGADGQPRPGAIGYL
HHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEE
VGEPHKGLACMFHMMNEARIGVGMGATMLGYTGYLHAVDYARNRPQGRPVGPSGKDAASP
ECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
QIRIVDHADVRRMLLAQKAYVEGALGLNLYCAKLVDEERGETDAAKRAKLGLLLDILTPI
EEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
AKSWPSQWCLEANSLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTHGIQGLDLLGRKV
HHCCCHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHCCCH
VMQDGAAFAALGERVQATVGRALETDDETLVGYGRALGMATQKLAKVTQTLWAAGDPRVT
HHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
LANASVYLEAFGHVVVAWIWLEQALAAAKALPNAQGEDADFYRGKLQAARYFFQWELPKI
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHEEEEEECCCCC
DPQIVLLGSLDTTTLDMQDAWF
CCCEEEEECCCCEEECCCCCCC
>Mature Secondary Structure 
SSKLLSRRDLSFLLYEWLNVESLTSIPRYADHSRETFDAALDTCERIATDLFAPHNKKN
CCCCCCCCCHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
DQEEPHFDGTKVHIIPEVKAALDAFNKAGLMAAGQDFERGGMQLPTVVEKAGFGFFKAAN
CCCCCCCCCCEEEEECHHHHHHHHHHHCCCEECCCCHHCCCCCCCHHHHHCCCCEEEECC
VGTSSYPFLTIGNANLLLAHGTPAQIETFVQPEMEGRFYGTMCLSEPQAGSSLSDIVTRA
CCCCCCCEEEECCCEEEEECCCCHHHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHHHHH
EYEGESPLGAQYRLTGNKMWISAGEHELSENIVHLVLAKIPGPDGKLIPGVKGISLFIVP
HCCCCCCCCCEEEEECCEEEEECCHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEEEEEE
KFLVNADGSLGERNDVVLAGLNHKMGYRGTTNCLLNFGEGTQFRPKGADGQPRPGAIGYL
HHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEE
VGEPHKGLACMFHMMNEARIGVGMGATMLGYTGYLHAVDYARNRPQGRPVGPSGKDAASP
ECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
QIRIVDHADVRRMLLAQKAYVEGALGLNLYCAKLVDEERGETDAAKRAKLGLLLDILTPI
EEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
AKSWPSQWCLEANSLAIQVHGGYGYTREYNVEQFYRDNRLNPIHEGTHGIQGLDLLGRKV
HHCCCHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHCCCH
VMQDGAAFAALGERVQATVGRALETDDETLVGYGRALGMATQKLAKVTQTLWAAGDPRVT
HHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
LANASVYLEAFGHVVVAWIWLEQALAAAKALPNAQGEDADFYRGKLQAARYFFQWELPKI
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHEEEEEECCCCC
DPQIVLLGSLDTTTLDMQDAWF
CCCEEEEECCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: butanoyl-CoA; acceptor

Specific reaction: butanoyl-CoA + acceptor = 2-butenoyl-CoA + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]