| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187927790
Identifier: 187927790
GI number: 187927790
Start: 732410
End: 732895
Strand: Direct
Name: 187927790
Synonym: Rpic_0694
Alternate gene names: NA
Gene position: 732410-732895 (Clockwise)
Preceding gene: 187927789
Following gene: 187927791
Centisome position: 18.58
GC content: 64.2
Gene sequence:
>486_bases ATGACGTTGCGTCTGTATCTCGCGGGGCCGGACGTTTTTCGTCCGGAGCCCATTGCGCACGGCGAGGCGCTCAAGGCGTT GTGCGCCGAGTTTGGCTTTAGCGGCCTGTACCCGCTGGATAACACGATCGCTCCCCAGGCAGATGGGCCTGCTACCGCCG CTGAAATCTACCGGCAGAACATCGCGCTGATCGATCTGGCGGATGCCGTGATCGCCAACGTGGCGGATTTTCGCGGGCAC GAGCCAGACTCCGGCACGTGCTTCGAAATCGGCTACGCCATCGCTCGCGGCAAGGAGGTGTGGTGCTACAACGTGCCCGC CGTGCCGCTCATCGGGCAGGTGCAGAACGCCAATGGCAATGATGCCGACGGCTGGGCCGTGGAAGACTTCGGTCTGCCGC GCAACCTCATGATCGCTTGCAGCTGCCGTCTCGTTGTGGGCGATGCGCGCGCGTGCCTGGAGCGCATGCGCGCGCACTAC GTATAG
Upstream 100 bases:
>100_bases ATGAACGCATCGAAGGCGTGAGCGGGGATGCCCGTGTCGTGTTGCTGCCCGGCACGCTGGTCGAACGTGCTTCGACGGTG CATTCGACGCAGGCCGCGTC
Downstream 100 bases:
>100_bases TCGCGTGCTGGATATGCGTATGCGGATTGCTTCCTTCAAGGCGGTCGGGGCCATCCGTATAGTGCCTGCACCGGATGGCG TCTCCGACGCGAGGCAAGCG
Product: nucleoside 2-deoxyribosyltransferase
Products: NA
Alternate protein names: Nucleoside 2-Deoxyribosyltransferase Family Protein
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MTLRLYLAGPDVFRPEPIAHGEALKALCAEFGFSGLYPLDNTIAPQADGPATAAEIYRQNIALIDLADAVIANVADFRGH EPDSGTCFEIGYAIARGKEVWCYNVPAVPLIGQVQNANGNDADGWAVEDFGLPRNLMIACSCRLVVGDARACLERMRAHY V
Sequences:
>Translated_161_residues MTLRLYLAGPDVFRPEPIAHGEALKALCAEFGFSGLYPLDNTIAPQADGPATAAEIYRQNIALIDLADAVIANVADFRGH EPDSGTCFEIGYAIARGKEVWCYNVPAVPLIGQVQNANGNDADGWAVEDFGLPRNLMIACSCRLVVGDARACLERMRAHY V >Mature_160_residues TLRLYLAGPDVFRPEPIAHGEALKALCAEFGFSGLYPLDNTIAPQADGPATAAEIYRQNIALIDLADAVIANVADFRGHE PDSGTCFEIGYAIARGKEVWCYNVPAVPLIGQVQNANGNDADGWAVEDFGLPRNLMIACSCRLVVGDARACLERMRAHYV
Specific function: Unknown
COG id: COG3613
COG function: function code F; Nucleoside 2-deoxyribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17367; Mature: 17236
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRLYLAGPDVFRPEPIAHGEALKALCAEFGFSGLYPLDNTIAPQADGPATAAEIYRQN CEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHC IALIDLADAVIANVADFRGHEPDSGTCFEIGYAIARGKEVWCYNVPAVPLIGQVQNANGN CEEEEHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHCCCEEEEECCCCCCEEEEEECCCCC DADGWAVEDFGLPRNLMIACSCRLVVGDARACLERMRAHYV CCCCEEEECCCCCCCEEEEEEEEEEECCHHHHHHHHHHCCC >Mature Secondary Structure TLRLYLAGPDVFRPEPIAHGEALKALCAEFGFSGLYPLDNTIAPQADGPATAAEIYRQN EEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHC IALIDLADAVIANVADFRGHEPDSGTCFEIGYAIARGKEVWCYNVPAVPLIGQVQNANGN CEEEEHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHCCCEEEEECCCCCCEEEEEECCCCC DADGWAVEDFGLPRNLMIACSCRLVVGDARACLERMRAHYV CCCCEEEECCCCCCCEEEEEEEEEEECCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA