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The map label for this gene is ybgF [C]

Identifier: 187927782

GI number: 187927782

Start: 724015

End: 724800

Strand: Direct

Name: ybgF [C]

Synonym: Rpic_0686

Alternate gene names: 187927782

Gene position: 724015-724800 (Clockwise)

Preceding gene: 187927781

Following gene: 187927783

Centisome position: 18.36

GC content: 63.1

Gene sequence:

>786_bases
ATGAATACGATGATGAAACAGCGCGCTTATGGGGCCATGCGTCGGGCCATCCTGATGGCGACGCTCGTCGCGGGTGGCGC
CCTCACCGTGGCCGGCCCGGCGGCAGCGGGGGTGTTTGACGACGATGAGGCGCGCCGCGCCATCATCGACATGCGCGACA
AGTTCAACAACTTCCAGTCGACGGCGGCCCAGCGCATCGATCAGAACAGCAAGAACCTGATCGACGCGCAAAACCAGATC
GAGACACTCAAATCCGAAGTGGCGCGCCTGCGCGGGCAGAACGAAGTCCTGCAGAACAGCGTCGATACGCTGACCAAGCA
GCAAAAGGATTACTACGCCGACCTCGATGCGCGCCTGAAGAAGTTCGAGCCGCAGCAAGCGACGGTGGACGGTCGCGAAG
GGATGGTCCAGCCGAACGAGAAGCCGGAATACGACGCTGCGCTCAAGGCGTTCCAGGGCGGGGACTTCAAGGGCGCGGGC
AACCAGTTCTCGGCGTTCGTGAAGAAGTATCCGCAAAGCCCGTATCTGCCGCTGGCGCAATTCTGGCTGGGCAACGCGCT
CTATGCGCAGCGCGACTACAAGGGCTCGAGCTACGTGCTGGAGAACATGGCGCGCAGCAATCCGCAGCATCCGAAGGCGC
CCGATGCCCTGCTGCAGGTGGCGACCAACCAGGGCGAGTCTGGTCAGAAGGCGGCCGCACGCAAGACGCTGGAATCGGTG
GTCTCGCAGTATCCCGGCACCGAGCAGGCTAAGACCGCGCAAAGCCGTCTGAAGTCGATGCGCTGA

Upstream 100 bases:

>100_bases
CACAGAACCGCCGCGCCGACATCGTCTACTAATCGGTATGGTTTGAAGTGGAACGCGCCGGCTGCGAGGTTGCGGCCGGC
GTTCTTACGTTGGCAATCAC

Downstream 100 bases:

>100_bases
TCGGCAGGCCGCTCGGCATGTGAACGAACGCCCGCCCGTGGCTGCACCGGCGGGCGTTTTTTCATGGACCGCTGAATAGC
GGGCATATGCCCGGTTGGGC

Product: tol-pal system protein YbgF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MNTMMKQRAYGAMRRAILMATLVAGGALTVAGPAAAGVFDDDEARRAIIDMRDKFNNFQSTAAQRIDQNSKNLIDAQNQI
ETLKSEVARLRGQNEVLQNSVDTLTKQQKDYYADLDARLKKFEPQQATVDGREGMVQPNEKPEYDAALKAFQGGDFKGAG
NQFSAFVKKYPQSPYLPLAQFWLGNALYAQRDYKGSSYVLENMARSNPQHPKAPDALLQVATNQGESGQKAAARKTLESV
VSQYPGTEQAKTAQSRLKSMR

Sequences:

>Translated_261_residues
MNTMMKQRAYGAMRRAILMATLVAGGALTVAGPAAAGVFDDDEARRAIIDMRDKFNNFQSTAAQRIDQNSKNLIDAQNQI
ETLKSEVARLRGQNEVLQNSVDTLTKQQKDYYADLDARLKKFEPQQATVDGREGMVQPNEKPEYDAALKAFQGGDFKGAG
NQFSAFVKKYPQSPYLPLAQFWLGNALYAQRDYKGSSYVLENMARSNPQHPKAPDALLQVATNQGESGQKAAARKTLESV
VSQYPGTEQAKTAQSRLKSMR
>Mature_261_residues
MNTMMKQRAYGAMRRAILMATLVAGGALTVAGPAAAGVFDDDEARRAIIDMRDKFNNFQSTAAQRIDQNSKNLIDAQNQI
ETLKSEVARLRGQNEVLQNSVDTLTKQQKDYYADLDARLKKFEPQQATVDGREGMVQPNEKPEYDAALKAFQGGDFKGAG
NQFSAFVKKYPQSPYLPLAQFWLGNALYAQRDYKGSSYVLENMARSNPQHPKAPDALLQVATNQGESGQKAAARKTLESV
VSQYPGTEQAKTAQSRLKSMR

Specific function: Unknown

COG id: COG1729

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybgF [H]

Homologues:

Organism=Escherichia coli, GI1786963, Length=98, Percent_Identity=38.7755102040816, Blast_Score=81, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014162
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28865; Mature: 28865

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]