| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is tolQ [H]
Identifier: 187927777
GI number: 187927777
Start: 719819
End: 720511
Strand: Direct
Name: tolQ [H]
Synonym: Rpic_0681
Alternate gene names: 187927777
Gene position: 719819-720511 (Clockwise)
Preceding gene: 187927776
Following gene: 187927778
Centisome position: 18.26
GC content: 63.64
Gene sequence:
>693_bases ATGAATCCCGTCGAGGTCACACAAGATCTGTCGATCGTCTCGCTGGTGCTGCACGCCAGCCTCCTGGTCCAATTCGTCAT GGGCCTGCTGCTGGTGATGTCGCTGTTCTCCTGGACGTACATCTTCCGCAAAGCCTTCGCCCTGCGCGCCGCGCGCAGCC AGACCGAATCGTTCGAGCGCGATTTCTGGGCTGGCGGCGACCTCCAGGCGCTGTATCAGAGCGCCGCCAACAACCGCCAC ACCACCGGCGCGCTTGAGCGCATCTTTGAAGCCGGCATGCGTGAATATTTGAAAGCGCGTGAGCTGCAGCGCGGCGGCGG CGATCCGAGTGCCATCCTCGATGCTTCCCGCCGTGCCATGCGTGCGGCTTACCAGCGTGAGATGGACTCGCTCGAATCGC ACCTGCCATTCCTGGCGTCGGTCGGCTCGGTCAGTCCGTATATCGGCCTGTTCGGCACGGTCTGGGGGATCATGAACGCC TTCCGCGGCCTGTCCAACGTGCAGCAGGCGACGCTGTCGGCGGTGGCGCCCGGTATTGCCGAAGCGCTGGTCGCCACGGC CATCGGTCTGTTTGCGGCCATTCCGGCGGTGATCGCCTATAACCGCTACGCCACCGAAATGGACCGCCTGGCCAACCGGT TCGAGAGCTTCATGGAAGAGTTCTCGAACATCCTCCAGCGCCAGACGCGCTAA
Upstream 100 bases:
>100_bases TGCTCGCATCAGGCACGATTCGTGTTGGATGTGTCGACCGGCTCACTTTCCGGCCGACCCCGATTCCCGCTCCCGTACTC GCAACCATCAAAGCCGCCGC
Downstream 100 bases:
>100_bases GGAGTCGCGCTCATGGCTACCATCCAGCGAACGCGCCGCGCCCGACGGGCCAAGGCTGACATCAACGTTGTTCCGTACAT CGACGTGATGCTGGTGCTGC
Product: protein TolQ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MNPVEVTQDLSIVSLVLHASLLVQFVMGLLLVMSLFSWTYIFRKAFALRAARSQTESFERDFWAGGDLQALYQSAANNRH TTGALERIFEAGMREYLKARELQRGGGDPSAILDASRRAMRAAYQREMDSLESHLPFLASVGSVSPYIGLFGTVWGIMNA FRGLSNVQQATLSAVAPGIAEALVATAIGLFAAIPAVIAYNRYATEMDRLANRFESFMEEFSNILQRQTR
Sequences:
>Translated_230_residues MNPVEVTQDLSIVSLVLHASLLVQFVMGLLLVMSLFSWTYIFRKAFALRAARSQTESFERDFWAGGDLQALYQSAANNRH TTGALERIFEAGMREYLKARELQRGGGDPSAILDASRRAMRAAYQREMDSLESHLPFLASVGSVSPYIGLFGTVWGIMNA FRGLSNVQQATLSAVAPGIAEALVATAIGLFAAIPAVIAYNRYATEMDRLANRFESFMEEFSNILQRQTR >Mature_230_residues MNPVEVTQDLSIVSLVLHASLLVQFVMGLLLVMSLFSWTYIFRKAFALRAARSQTESFERDFWAGGDLQALYQSAANNRH TTGALERIFEAGMREYLKARELQRGGGDPSAILDASRRAMRAAYQREMDSLESHLPFLASVGSVSPYIGLFGTVWGIMNA FRGLSNVQQATLSAVAPGIAEALVATAIGLFAAIPAVIAYNRYATEMDRLANRFESFMEEFSNILQRQTR
Specific function: Involved in the tonB-independent uptake of proteins [H]
COG id: COG0811
COG function: function code U; Biopolymer transport proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exbB/tolQ family [H]
Homologues:
Organism=Escherichia coli, GI1786958, Length=221, Percent_Identity=50.2262443438914, Blast_Score=211, Evalue=4e-56, Organism=Escherichia coli, GI1789381, Length=208, Percent_Identity=37.9807692307692, Blast_Score=115, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002898 - InterPro: IPR014163 [H]
Pfam domain/function: PF01618 MotA_ExbB [H]
EC number: NA
Molecular weight: Translated: 25485; Mature: 25485
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPVEVTQDLSIVSLVLHASLLVQFVMGLLLVMSLFSWTYIFRKAFALRAARSQTESFER CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DFWAGGDLQALYQSAANNRHTTGALERIFEAGMREYLKARELQRGGGDPSAILDASRRAM HHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH RAAYQREMDSLESHLPFLASVGSVSPYIGLFGTVWGIMNAFRGLSNVQQATLSAVAPGIA HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EALVATAIGLFAAIPAVIAYNRYATEMDRLANRFESFMEEFSNILQRQTR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNPVEVTQDLSIVSLVLHASLLVQFVMGLLLVMSLFSWTYIFRKAFALRAARSQTESFER CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DFWAGGDLQALYQSAANNRHTTGALERIFEAGMREYLKARELQRGGGDPSAILDASRRAM HHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH RAAYQREMDSLESHLPFLASVGSVSPYIGLFGTVWGIMNAFRGLSNVQQATLSAVAPGIA HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EALVATAIGLFAAIPAVIAYNRYATEMDRLANRFESFMEEFSNILQRQTR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8955385; 10984043 [H]