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The map label for this gene is ybgC [C]

Identifier: 187927776

GI number: 187927776

Start: 719418

End: 719822

Strand: Direct

Name: ybgC [C]

Synonym: Rpic_0680

Alternate gene names: 187927776

Gene position: 719418-719822 (Clockwise)

Preceding gene: 187927775

Following gene: 187927777

Centisome position: 18.25

GC content: 61.98

Gene sequence:

>405_bases
ATGGCTTCTTTTGACTGGAACCTGCGCGTGTATTGGGAAGATACCGACGCAGGCGGCGTGGTGTTTTACGCCAACTATTT
GAAATTTTTTGAGCGCGCCCGCACCGAGTGGCTGCGCGCGCTTGGGGTCGACCAGCAGGCTCTGGCCGACACGACCGGGG
CCATTTTCGTGGTCCGCAGCACCGCCGTGGATTACCGCGCGCCGGCGCGCCTGGATGACCTGCTGCAGATCCGTTCGCGT
ATGGAACGGGTTGGCCCTGCGTCTGTCCAATTCGCCCAAGAAGGCTGGCGTGGCGACGTTTTGCTCGCATCAGGCACGAT
TCGTGTTGGATGTGTCGACCGGCTCACTTTCCGGCCGACCCCGATTCCCGCTCCCGTACTCGCAACCATCAAAGCCGCCG
CATGA

Upstream 100 bases:

>100_bases
GGCCACCAGCGTGACGCGAGGCATGGCCTGAATTCGAGCGCAAGCCCTCGGCCAGTCGGTGGATGTCTGGCCGTCACTTG
CGTCTTGGTAAAATTACTCG

Downstream 100 bases:

>100_bases
ATCCCGTCGAGGTCACACAAGATCTGTCGATCGTCTCGCTGGTGCTGCACGCCAGCCTCCTGGTCCAATTCGTCATGGGC
CTGCTGCTGGTGATGTCGCT

Product: tol-pal system-associated acyl-CoA thioesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MASFDWNLRVYWEDTDAGGVVFYANYLKFFERARTEWLRALGVDQQALADTTGAIFVVRSTAVDYRAPARLDDLLQIRSR
MERVGPASVQFAQEGWRGDVLLASGTIRVGCVDRLTFRPTPIPAPVLATIKAAA

Sequences:

>Translated_134_residues
MASFDWNLRVYWEDTDAGGVVFYANYLKFFERARTEWLRALGVDQQALADTTGAIFVVRSTAVDYRAPARLDDLLQIRSR
MERVGPASVQFAQEGWRGDVLLASGTIRVGCVDRLTFRPTPIPAPVLATIKAAA
>Mature_133_residues
ASFDWNLRVYWEDTDAGGVVFYANYLKFFERARTEWLRALGVDQQALADTTGAIFVVRSTAVDYRAPARLDDLLQIRSRM
ERVGPASVQFAQEGWRGDVLLASGTIRVGCVDRLTFRPTPIPAPVLATIKAAA

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786957, Length=129, Percent_Identity=45.7364341085271, Blast_Score=112, Evalue=7e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683
- InterPro:   IPR014166 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 14924; Mature: 14793

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASFDWNLRVYWEDTDAGGVVFYANYLKFFERARTEWLRALGVDQQALADTTGAIFVVRS
CCCCCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEEE
TAVDYRAPARLDDLLQIRSRMERVGPASVQFAQEGWRGDVLLASGTIRVGCVDRLTFRPT
CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEECCEEEEEEEECEEECCC
PIPAPVLATIKAAA
CCCCHHHHHEECCC
>Mature Secondary Structure 
ASFDWNLRVYWEDTDAGGVVFYANYLKFFERARTEWLRALGVDQQALADTTGAIFVVRS
CCCCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEEE
TAVDYRAPARLDDLLQIRSRMERVGPASVQFAQEGWRGDVLLASGTIRVGCVDRLTFRPT
CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEECCEEEEEEEECEEECCC
PIPAPVLATIKAAA
CCCCHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]