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The map label for this gene is yfdH [C]

Identifier: 187927696

GI number: 187927696

Start: 634816

End: 635829

Strand: Direct

Name: yfdH [C]

Synonym: Rpic_0600

Alternate gene names: 187927696

Gene position: 634816-635829 (Clockwise)

Preceding gene: 187927695

Following gene: 187927705

Centisome position: 16.1

GC content: 60.55

Gene sequence:

>1014_bases
ATGTTGGATTACAAAAGAAACCAACTCCTTTCGCTGGTTGTACCGTTCTACAACGAAGGCGAGGCGCTGGAGTCCTTCTT
TGCACGGGTCGTGCCGATCCTGGAGTCGGTCGAGTTCATGCAGTTCGAGATCGTGTGCGTGAACGACGGTAGCAAAGACG
ACACCCTGCAGAAGTTGATCGCGGTGTCCCGCATGGACGAGCGTGTACGGGTGATCGATCTGACACGCAACTTCGGCAAG
GAAGCCGCGCTGACGGCCGGCATTGACGAGGCACTTGGCGATGCCGTCATCCCAATCGATGCTGATCTGCAAGACCCGCC
GGAACTGATTCCCACCCTGGTGGCACACTGGCAGAAGGGGGCGGAAGTGGTCCTTGCACAGCGCGCCAGCCGTGCCTGCG
ACACCTTCCTCAAGCGGGTGACTGCGGCCGCGTATTACCGAGTCCACAACACGTTGTCCGACCTGAAGCTGCCGGAAAAC
GTTGGCGATTTCCGCTTGATGGACCGTGCGGTCGTCAATGCGCTCAAGCAGTTGCCCGAGCGGCACCGATTCATGAAGGG
CCTGTTTGCGTGGGTGGGTTTCAACACCGTGATCGTTCCGTACGAGCGGGAGGCACGCAGCGCGGGTCAGTCGAAGTTCT
CCGGCTGGCGCCTGTGGAATTTCGCGCTGGAAGGCATCACCAGTTTCAGCACCTGGCCGCTGCGGAGCTGGACGTATATC
GGTTTGGCCATTGCAAGCCTGGCATTCGTGTACGGCAGCTACATCATCGCTCGCACCATGGTTCTGGGTGTGGATGTGCC
GGGCTACGCCTCGCTGCTGTCGCTGCTGCTGTTCTTTGGTGGCCTGCAATTGATCGGGTTGGGCGTGGTGGGCGAATACA
TTGGCCGTATCTACGACGAGGCCAAGGGGCGCCCGATCTACCTGGTGAAGCGCCGCTATCAGGAGCGCCGGCTGCGCAAC
CGGTTGACGGGTGAGCGGCGCGTGATTCAGATGGTGCGAGGTCAGCGCGGTTAG

Upstream 100 bases:

>100_bases
TGCTTGCACTCGCGCATATCGCGCGCCGTATTCATCTTGAGCGCACACGCAACGCGTCACGTAGCCGCGTGCCAAGGCGC
CTTGGACGGGGAGAACAATG

Downstream 100 bases:

>100_bases
GCGCGTCTGGGCACAGGGGAGTCCACACCGGACCCGGCGCGTCACCTGACCGTCCATGCTCTGGTCGCATTGATGCTCCG
GGTTTTGGTTCCGCGACTGG

Product: family 2 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MLDYKRNQLLSLVVPFYNEGEALESFFARVVPILESVEFMQFEIVCVNDGSKDDTLQKLIAVSRMDERVRVIDLTRNFGK
EAALTAGIDEALGDAVIPIDADLQDPPELIPTLVAHWQKGAEVVLAQRASRACDTFLKRVTAAAYYRVHNTLSDLKLPEN
VGDFRLMDRAVVNALKQLPERHRFMKGLFAWVGFNTVIVPYEREARSAGQSKFSGWRLWNFALEGITSFSTWPLRSWTYI
GLAIASLAFVYGSYIIARTMVLGVDVPGYASLLSLLLFFGGLQLIGLGVVGEYIGRIYDEAKGRPIYLVKRRYQERRLRN
RLTGERRVIQMVRGQRG

Sequences:

>Translated_337_residues
MLDYKRNQLLSLVVPFYNEGEALESFFARVVPILESVEFMQFEIVCVNDGSKDDTLQKLIAVSRMDERVRVIDLTRNFGK
EAALTAGIDEALGDAVIPIDADLQDPPELIPTLVAHWQKGAEVVLAQRASRACDTFLKRVTAAAYYRVHNTLSDLKLPEN
VGDFRLMDRAVVNALKQLPERHRFMKGLFAWVGFNTVIVPYEREARSAGQSKFSGWRLWNFALEGITSFSTWPLRSWTYI
GLAIASLAFVYGSYIIARTMVLGVDVPGYASLLSLLLFFGGLQLIGLGVVGEYIGRIYDEAKGRPIYLVKRRYQERRLRN
RLTGERRVIQMVRGQRG
>Mature_337_residues
MLDYKRNQLLSLVVPFYNEGEALESFFARVVPILESVEFMQFEIVCVNDGSKDDTLQKLIAVSRMDERVRVIDLTRNFGK
EAALTAGIDEALGDAVIPIDADLQDPPELIPTLVAHWQKGAEVVLAQRASRACDTFLKRVTAAAYYRVHNTLSDLKLPEN
VGDFRLMDRAVVNALKQLPERHRFMKGLFAWVGFNTVIVPYEREARSAGQSKFSGWRLWNFALEGITSFSTWPLRSWTYI
GLAIASLAFVYGSYIIARTMVLGVDVPGYASLLSLLLFFGGLQLIGLGVVGEYIGRIYDEAKGRPIYLVKRRYQERRLRN
RLTGERRVIQMVRGQRG

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788692, Length=302, Percent_Identity=55.9602649006622, Blast_Score=343, Evalue=1e-95,
Organism=Escherichia coli, GI1788588, Length=318, Percent_Identity=32.3899371069182, Blast_Score=164, Evalue=1e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 38147; Mature: 38147

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDYKRNQLLSLVVPFYNEGEALESFFARVVPILESVEFMQFEIVCVNDGSKDDTLQKLI
CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHH
AVSRMDERVRVIDLTRNFGKEAALTAGIDEALGDAVIPIDADLQDPPELIPTLVAHWQKG
HHHHHHCHHHEEHHHHHCCCHHHHHCCHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHCC
AEVVLAQRASRACDTFLKRVTAAAYYRVHNTLSDLKLPENVGDFRLMDRAVVNALKQLPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
RHRFMKGLFAWVGFNTVIVPYEREARSAGQSKFSGWRLWNFALEGITSFSTWPLRSWTYI
HHHHHHHHHHHHCCCEEEECCCHHHHHCCCHHCCCHHHHHHHHHHHHCCCCCCCCHHHHH
GLAIASLAFVYGSYIIARTMVLGVDVPGYASLLSLLLFFGGLQLIGLGVVGEYIGRIYDE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
AKGRPIYLVKRRYQERRLRNRLTGERRVIQMVRGQRG
CCCCEEEHHHHHHHHHHHHHHHCHHHHHHHHHHCCCC
>Mature Secondary Structure
MLDYKRNQLLSLVVPFYNEGEALESFFARVVPILESVEFMQFEIVCVNDGSKDDTLQKLI
CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHH
AVSRMDERVRVIDLTRNFGKEAALTAGIDEALGDAVIPIDADLQDPPELIPTLVAHWQKG
HHHHHHCHHHEEHHHHHCCCHHHHHCCHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHCC
AEVVLAQRASRACDTFLKRVTAAAYYRVHNTLSDLKLPENVGDFRLMDRAVVNALKQLPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
RHRFMKGLFAWVGFNTVIVPYEREARSAGQSKFSGWRLWNFALEGITSFSTWPLRSWTYI
HHHHHHHHHHHHCCCEEEECCCHHHHHCCCHHCCCHHHHHHHHHHHHCCCCCCCCHHHHH
GLAIASLAFVYGSYIIARTMVLGVDVPGYASLLSLLLFFGGLQLIGLGVVGEYIGRIYDE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
AKGRPIYLVKRRYQERRLRNRLTGERRVIQMVRGQRG
CCCCEEEHHHHHHHHHHHHHHHCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]