| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187927695
Identifier: 187927695
GI number: 187927695
Start: 633500
End: 634816
Strand: Direct
Name: 187927695
Synonym: Rpic_0599
Alternate gene names: NA
Gene position: 633500-634816 (Clockwise)
Preceding gene: 187927694
Following gene: 187927696
Centisome position: 16.07
GC content: 63.55
Gene sequence:
>1317_bases ATGGCCGTCGCCTTGAACCTTCTAAAGCACAGGGCGCCCGAGGCTACGACGGCGCCCCCAGAAACCGCACCAGGTGCTCG CCACTGGTTGGGCCCGGACCGCGTGCGCGTGTACTCGATGGCTGCGCTGGCCTGCTACGTCGCGTACTTTGTAATCTGGG CTGTTCGCGCCAGCGTGTTGAAGGTCGCGGGTGTCTTTCCGCTTGGCGGCGATTTTCTGGTGTTCTGGAGCGCTGCGCAG TTGGTGCTGCAAGGGCACCCACCCGCTGCCTACGATGTGGCTGTGCTGCATAACGTGGAGCTGGCAACCGTCCCACTGGT GGCGACAACCCAGGGGTTGTTGCCCTGGTTCTATCCGCCAACCTTCCTGCCCTTCATCGCGCCCTTCGGGCTGCTGCCGT ACTGGCTTGCCGTGCTCGTCTTCCTGAGTATGAGCGTCGGGTGTTTCCTGTGGGTTGTCGGCCGAATCGTGCTATGGCGG CAGGCATGGCTGCCGTGCGCGGCGTTTCCCGGGATTGCGGTCGTGCTCGCAACGGGGCAGAACGCGTTGCTGCTGGCGGC ATGTGCTGGTTTGGCGCTCACGTTGCTGCATTCCCCTCGCCCCAAGCGGCCCCCCAGCCCGATCGCAGCGGGCATGTTGC TCGCCCTGCTGACGGTGAAACCGCAATTGGCTGTGATGTTTCCGGTGGCACTGATGTGCGCCGGAGCCTGGAAAACGTTG ATTGCAATGGCGCTGACCTCACTCGCGCTGGCAGTGCTGGCGCTGGCAGCGTTCGGCCCGCAGTCGTTCATTGCCTTTCT GCACAACGCGGCGTTGGCGCGCTCGGCAGTGGAAGCCGGCGCAGTCCATCTGGAGCGCATGCCCACCCTCTTTGCCATGG TCAAGATGCTGCACGGCAGCGTGATGTTGGCCTACGTGCTGCATCTGATAGGGGGCTTCACGGCCTGTGCCGCAGTCGCC TATGCCTGGAGTCGGCCTTGCAGCTTTGCACTGCGTGCCGCAGCCGTGCTGACGGCAAGCATGCTCGCCAGCCCTTACCT GTACGACTACGACCTGGCGTTCCTCGGTCTGGCCATTGCCTGGCTGGCCTCCTACGCGTTGCGGGATGGGTGGCTGCCCG GTGAACGTGAAGGGCTCATCCTGCTGTGGCTTTTGCCGCTGGGCGGAATGCTCTTGATTGACCGACTCGGCTTTCAACTG ATGCCACTTGTATTGCTGCTTGCACTCGCGCATATCGCGCGCCGTATTCATCTTGAGCGCACACGCAACGCGTCACGTAG CCGCGTGCCAAGGCGCCTTGGACGGGGAGAACAATGA
Upstream 100 bases:
>100_bases GCCAATCCTTACCTGAAGCTGCCGCAGTTTGGGCCGGCGGTTCTGATTGCCATGATGGCGCTTGTTGTGCGGCGCGTGGC AACGCGGGCGTGAGGGCACC
Downstream 100 bases:
>100_bases TGTTGGATTACAAAAGAAACCAACTCCTTTCGCTGGTTGTACCGTTCTACAACGAAGGCGAGGCGCTGGAGTCCTTCTTT GCACGGGTCGTGCCGATCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MAVALNLLKHRAPEATTAPPETAPGARHWLGPDRVRVYSMAALACYVAYFVIWAVRASVLKVAGVFPLGGDFLVFWSAAQ LVLQGHPPAAYDVAVLHNVELATVPLVATTQGLLPWFYPPTFLPFIAPFGLLPYWLAVLVFLSMSVGCFLWVVGRIVLWR QAWLPCAAFPGIAVVLATGQNALLLAACAGLALTLLHSPRPKRPPSPIAAGMLLALLTVKPQLAVMFPVALMCAGAWKTL IAMALTSLALAVLALAAFGPQSFIAFLHNAALARSAVEAGAVHLERMPTLFAMVKMLHGSVMLAYVLHLIGGFTACAAVA YAWSRPCSFALRAAAVLTASMLASPYLYDYDLAFLGLAIAWLASYALRDGWLPGEREGLILLWLLPLGGMLLIDRLGFQL MPLVLLLALAHIARRIHLERTRNASRSRVPRRLGRGEQ
Sequences:
>Translated_438_residues MAVALNLLKHRAPEATTAPPETAPGARHWLGPDRVRVYSMAALACYVAYFVIWAVRASVLKVAGVFPLGGDFLVFWSAAQ LVLQGHPPAAYDVAVLHNVELATVPLVATTQGLLPWFYPPTFLPFIAPFGLLPYWLAVLVFLSMSVGCFLWVVGRIVLWR QAWLPCAAFPGIAVVLATGQNALLLAACAGLALTLLHSPRPKRPPSPIAAGMLLALLTVKPQLAVMFPVALMCAGAWKTL IAMALTSLALAVLALAAFGPQSFIAFLHNAALARSAVEAGAVHLERMPTLFAMVKMLHGSVMLAYVLHLIGGFTACAAVA YAWSRPCSFALRAAAVLTASMLASPYLYDYDLAFLGLAIAWLASYALRDGWLPGEREGLILLWLLPLGGMLLIDRLGFQL MPLVLLLALAHIARRIHLERTRNASRSRVPRRLGRGEQ >Mature_437_residues AVALNLLKHRAPEATTAPPETAPGARHWLGPDRVRVYSMAALACYVAYFVIWAVRASVLKVAGVFPLGGDFLVFWSAAQL VLQGHPPAAYDVAVLHNVELATVPLVATTQGLLPWFYPPTFLPFIAPFGLLPYWLAVLVFLSMSVGCFLWVVGRIVLWRQ AWLPCAAFPGIAVVLATGQNALLLAACAGLALTLLHSPRPKRPPSPIAAGMLLALLTVKPQLAVMFPVALMCAGAWKTLI AMALTSLALAVLALAAFGPQSFIAFLHNAALARSAVEAGAVHLERMPTLFAMVKMLHGSVMLAYVLHLIGGFTACAAVAY AWSRPCSFALRAAAVLTASMLASPYLYDYDLAFLGLAIAWLASYALRDGWLPGEREGLILLWLLPLGGMLLIDRLGFQLM PLVLLLALAHIARRIHLERTRNASRSRVPRRLGRGEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47201; Mature: 47070
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVALNLLKHRAPEATTAPPETAPGARHWLGPDRVRVYSMAALACYVAYFVIWAVRASVL CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KVAGVFPLGGDFLVFWSAAQLVLQGHPPAAYDVAVLHNVELATVPLVATTQGLLPWFYPP HHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHEECHHHHHCCCCCCCCCH TFLPFIAPFGLLPYWLAVLVFLSMSVGCFLWVVGRIVLWRQAWLPCAAFPGIAVVLATGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCEEEEEECCC NALLLAACAGLALTLLHSPRPKRPPSPIAAGMLLALLTVKPQLAVMFPVALMCAGAWKTL CHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH IAMALTSLALAVLALAAFGPQSFIAFLHNAALARSAVEAGAVHLERMPTLFAMVKMLHGS HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VMLAYVLHLIGGFTACAAVAYAWSRPCSFALRAAAVLTASMLASPYLYDYDLAFLGLAIA HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH WLASYALRDGWLPGEREGLILLWLLPLGGMLLIDRLGFQLMPLVLLLALAHIARRIHLER HHHHHHHHCCCCCCCCCCEEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRNASRSRVPRRLGRGEQ HCCCHHHHHHHHCCCCCC >Mature Secondary Structure AVALNLLKHRAPEATTAPPETAPGARHWLGPDRVRVYSMAALACYVAYFVIWAVRASVL HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KVAGVFPLGGDFLVFWSAAQLVLQGHPPAAYDVAVLHNVELATVPLVATTQGLLPWFYPP HHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHEECHHHHHCCCCCCCCCH TFLPFIAPFGLLPYWLAVLVFLSMSVGCFLWVVGRIVLWRQAWLPCAAFPGIAVVLATGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCEEEEEECCC NALLLAACAGLALTLLHSPRPKRPPSPIAAGMLLALLTVKPQLAVMFPVALMCAGAWKTL CHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH IAMALTSLALAVLALAAFGPQSFIAFLHNAALARSAVEAGAVHLERMPTLFAMVKMLHGS HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VMLAYVLHLIGGFTACAAVAYAWSRPCSFALRAAAVLTASMLASPYLYDYDLAFLGLAIA HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH WLASYALRDGWLPGEREGLILLWLLPLGGMLLIDRLGFQLMPLVLLLALAHIARRIHLER HHHHHHHHCCCCCCCCCCEEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRNASRSRVPRRLGRGEQ HCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA