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The map label for this gene is fimA [H]

Identifier: 187927578

GI number: 187927578

Start: 511529

End: 512038

Strand: Direct

Name: fimA [H]

Synonym: Rpic_0478

Alternate gene names: 187927578

Gene position: 511529-512038 (Clockwise)

Preceding gene: 187927577

Following gene: 187927579

Centisome position: 12.97

GC content: 59.22

Gene sequence:

>510_bases
ATGAAATCGATGCGTCGTCTGAACAAGCGGGTCCAGAAGGGCTTCACGCTGATCGAACTGATGATCGTGGTTGCAATCGT
CGGTATTCTGGCTGCTATCGCCATTCCGGCGTATCAGGACTACACGATTCGTGCCCGCGTGACGGAAGGTCTGTCGCTGG
CTGCTGCTGCCAAGGTGTTGGTGGCCGAAAACGCAGCCAATGCACAAAGCGATCTGTCGGCTGGTTCCACGGTGTTTGCG
GCTACGAAAAACGTGAATAACTTGGTCGTCTCGGGTACGGATGGGCATATCACGATTACCTATGGCTCGGCCGTGTCCAC
CTCTAACCCGACGCTGACGCTCACGCCGTATTTCACGGTTGGCTCGACGAACTCCAACCTGGCTCAAAGCTCCGCACCGG
CCGCTCCGGTTCAGTGGAAGTGCGCATCGGCAAGCGCAACGGCGCCTACCGGCGTGACTGTGACGCTTGGCTCGCTGCCG
GCCAAGTGGGCACCGGCTGAGTGCCGCTAA

Upstream 100 bases:

>100_bases
CGACAGTTTTGACACACGAGTTCACGAAATCGAGATGGCACGGTCCCTGCTCTAATAGCCTTGCATCATCCTTAACCAAA
TTTTTCCGGGGGAAAATTCA

Downstream 100 bases:

>100_bases
GCTACACTAGCTGTTGCTCAAAGAGCGCCTTCGGGCGCTCTTTTTATTTCGCCGATCCCATTTCACTTCAAATGCCTCAG
TCGCGATTTTTGTTGTGGCC

Product: type 4 fimbrial pilin signal peptide protein

Products: NA

Alternate protein names: 238 antigen; Pilin; Serogroup G1 [H]

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MKSMRRLNKRVQKGFTLIELMIVVAIVGILAAIAIPAYQDYTIRARVTEGLSLAAAAKVLVAENAANAQSDLSAGSTVFA
ATKNVNNLVVSGTDGHITITYGSAVSTSNPTLTLTPYFTVGSTNSNLAQSSAPAAPVQWKCASASATAPTGVTVTLGSLP
AKWAPAECR

Sequences:

>Translated_169_residues
MKSMRRLNKRVQKGFTLIELMIVVAIVGILAAIAIPAYQDYTIRARVTEGLSLAAAAKVLVAENAANAQSDLSAGSTVFA
ATKNVNNLVVSGTDGHITITYGSAVSTSNPTLTLTPYFTVGSTNSNLAQSSAPAAPVQWKCASASATAPTGVTVTLGSLP
AKWAPAECR
>Mature_169_residues
MKSMRRLNKRVQKGFTLIELMIVVAIVGILAAIAIPAYQDYTIRARVTEGLSLAAAAKVLVAENAANAQSDLSAGSTVFA
ATKNVNNLVVSGTDGHITITYGSAVSTSNPTLTLTPYFTVGSTNSNLAQSSAPAAPVQWKCASASATAPTGVTVTLGSLP
AKWAPAECR

Specific function: Not Yet Known. [C]

COG id: COG4969

COG function: function code NU; Tfp pilus assembly protein, major pilin PilA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-Me-Phe pilin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002416
- InterPro:   IPR001082
- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl; PF00114 Pilin [H]

EC number: NA

Molecular weight: Translated: 17396; Mature: 17396

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSMRRLNKRVQKGFTLIELMIVVAIVGILAAIAIPAYQDYTIRARVTEGLSLAAAAKVL
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHEE
VAENAANAQSDLSAGSTVFAATKNVNNLVVSGTDGHITITYGSAVSTSNPTLTLTPYFTV
EECCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCEEEEEECCEEECCCCEEEEEEEEEE
GSTNSNLAQSSAPAAPVQWKCASASATAPTGVTVTLGSLPAKWAPAECR
CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MKSMRRLNKRVQKGFTLIELMIVVAIVGILAAIAIPAYQDYTIRARVTEGLSLAAAAKVL
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHEE
VAENAANAQSDLSAGSTVFAATKNVNNLVVSGTDGHITITYGSAVSTSNPTLTLTPYFTV
EECCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCEEEEEECCEEECCCCEEEEEEEEEE
GSTNSNLAQSSAPAAPVQWKCASASATAPTGVTVTLGSLPAKWAPAECR
CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2889185; 1675419 [H]