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The map label for this gene is 187927579

Identifier: 187927579

GI number: 187927579

Start: 512110

End: 513846

Strand: Direct

Name: 187927579

Synonym: Rpic_0479

Alternate gene names: NA

Gene position: 512110-513846 (Clockwise)

Preceding gene: 187927578

Following gene: 187927580

Centisome position: 12.99

GC content: 56.3

Gene sequence:

>1737_bases
ATGCCTCAGTCGCGATTTTTGTTGTGGCCCTTGTGGTTTTTCGCAGCGGTTTGCTTCTCTGCGCCCTTCTTGGTCGCACC
GCACACCTATCCGATTCCAACGTTTTATGCCGAGTCCGCGTCAGCATGGTGCTGGATTGCCTTCTCGTTAGTCGTGCTGG
GGCTTAGTTGGCGTGGGAGGGCTAGCTCGCCAAGTATTGCGCTCGCACCACTCGCTTTGATTGTGGTGCTCATCGTTCAA
CTGGGAATCGCAACGCCTCTCAATCCATTTTTTTCCTTTGCCGCATGCATTTGTTTACTGGCAGCGATGGTTGTTTGCGG
TTTGGGTGCTCGATGCCGGGAGATGCCCGGTGTGCTTGAGGCCGTAGCGGTCGGCACGATCCTTGGCGGGTTGGCAACGG
TCGCAGTGGAGCAAGTTCATCTCTGGCGGCTCGTGGGGATACCGGACATTCTCATCGGTTTGCCTCCCACCGGGCTTGGC
CGCCGCATGTGGGGCAACTTGAACCAGCCAAACCACGTGGCTTCGTACTTCGCATTTGGTCTTGCCGCATGCCTCTTCCT
CTGGCAGCGAGTCCGCTCGTTAGGTTTGCGTATTCTGCTAGGCATCGTGGTACTGGCCTTCCTGTTTGGCACTGCGCTCA
GTGTTTCCCGCGTGGCGTGGCTACATCTGATTGCCGTAGGCCTGTTCGCCGGATGGTCTTGGGCTTCACAAACGACAGGC
CGACGTCGCTGGTTCGTTTTCGTAACCCCGGTTCTGGCATTGACGATTGCCTATCAGTTATGCAATTGGTTGATGGATTA
CGGCAATGTTCTCTGGCAATGGGGCCTGCCGACATCACTGGGGGAACGCATGCAGCAAGGCGCAGGATTGCGCCCCCTGT
TGTGGAACCACGCATGGCACATGTTCATCGCGCACCCGTGGCTCGGCGCAGGATGGGGGGATTACGCGTGGAATCAGTAC
GTCCAAACCGATGTGCTGGGTCATGTTGAGATGTCAATGAACGCGCACAACATCGTGCTAGATCTGCTCGCCAAGGTTGG
CTTAGCCGGTCTGTTTGCTGTTGTGCTGCCGGCGGTCGGACTGATCTCGCTTCTTTGGAAGTTTCGGATGACGCCCCCAG
CGGCATTTCTGTGGTCGGTGGTTGCCGTACTAACCATTCATTCGATGCTGGAGTATCCGCTGTACTACCTCTATTTCCTG
CTGCCCTTTGCGTTCGCACTCGGCTACCTAGACACGCGCATGCTGCGTTTTCCCTCGCCCAGCATGACATGGGTTTTGAG
CGGAGTGATCGTGGTGTGCGTCAGTGCGCTATCTGCCCGCATGTGGATTGACTACAAGTCAGTCGAGCGCCTGTACTACG
CACCTGCCGGCTTGAGCAAGGAGTTGCCGGTCTATCAAGCAAGCGGACAGATGCTGTTGGTACCTTACGCAACACTGGCC
ATTGCAATCAACTCGGGAATTACATACGAGATGGCAGCCGTAATGGCGGCATTGGAACGCCAGGCAACCCAGTTCTATCC
AGGAGCCGCTACATCGCAGCGCTACGCTCTAACGTTGGCGTTCCAAGGGAAAACGGAAGAGGCCGTGACGCAAGTGCGCC
GCCTACATAACCAATACTGGACGGATTACGCAGCGCAGTCGTCGCTGCTTACTCAATCATGTTTGCAGAAGGCCGATGAT
CTCAAAGTGTTCTGCGACCGCCTGAAGTCTGAGGGCTTACTTGTTGGTGTCAATTAG

Upstream 100 bases:

>100_bases
CCAAGTGGGCACCGGCTGAGTGCCGCTAAGCTACACTAGCTGTTGCTCAAAGAGCGCCTTCGGGCGCTCTTTTTATTTCG
CCGATCCCATTTCACTTCAA

Downstream 100 bases:

>100_bases
TATCGTGAGTAAAGCCTGAAGGAATAATAAAACGCCTCATTGAGGCGTTTTTTTTGATGCGCGCAAAAATTGCGGCTGCT
TTTGTGAAAATGAGTTGTGC

Product: O-antigen polymerase

Products: NA

Alternate protein names: O-Antigen Polymerase Family Protein; O-Antigen Ligase; Lipopolysaccharide Biosynthesis Protein; O-Antigen Polymerase Family; Lipid A Core; O-Antigen Ligase And Related S

Number of amino acids: Translated: 578; Mature: 577

Protein sequence:

>578_residues
MPQSRFLLWPLWFFAAVCFSAPFLVAPHTYPIPTFYAESASAWCWIAFSLVVLGLSWRGRASSPSIALAPLALIVVLIVQ
LGIATPLNPFFSFAACICLLAAMVVCGLGARCREMPGVLEAVAVGTILGGLATVAVEQVHLWRLVGIPDILIGLPPTGLG
RRMWGNLNQPNHVASYFAFGLAACLFLWQRVRSLGLRILLGIVVLAFLFGTALSVSRVAWLHLIAVGLFAGWSWASQTTG
RRRWFVFVTPVLALTIAYQLCNWLMDYGNVLWQWGLPTSLGERMQQGAGLRPLLWNHAWHMFIAHPWLGAGWGDYAWNQY
VQTDVLGHVEMSMNAHNIVLDLLAKVGLAGLFAVVLPAVGLISLLWKFRMTPPAAFLWSVVAVLTIHSMLEYPLYYLYFL
LPFAFALGYLDTRMLRFPSPSMTWVLSGVIVVCVSALSARMWIDYKSVERLYYAPAGLSKELPVYQASGQMLLVPYATLA
IAINSGITYEMAAVMAALERQATQFYPGAATSQRYALTLAFQGKTEEAVTQVRRLHNQYWTDYAAQSSLLTQSCLQKADD
LKVFCDRLKSEGLLVGVN

Sequences:

>Translated_578_residues
MPQSRFLLWPLWFFAAVCFSAPFLVAPHTYPIPTFYAESASAWCWIAFSLVVLGLSWRGRASSPSIALAPLALIVVLIVQ
LGIATPLNPFFSFAACICLLAAMVVCGLGARCREMPGVLEAVAVGTILGGLATVAVEQVHLWRLVGIPDILIGLPPTGLG
RRMWGNLNQPNHVASYFAFGLAACLFLWQRVRSLGLRILLGIVVLAFLFGTALSVSRVAWLHLIAVGLFAGWSWASQTTG
RRRWFVFVTPVLALTIAYQLCNWLMDYGNVLWQWGLPTSLGERMQQGAGLRPLLWNHAWHMFIAHPWLGAGWGDYAWNQY
VQTDVLGHVEMSMNAHNIVLDLLAKVGLAGLFAVVLPAVGLISLLWKFRMTPPAAFLWSVVAVLTIHSMLEYPLYYLYFL
LPFAFALGYLDTRMLRFPSPSMTWVLSGVIVVCVSALSARMWIDYKSVERLYYAPAGLSKELPVYQASGQMLLVPYATLA
IAINSGITYEMAAVMAALERQATQFYPGAATSQRYALTLAFQGKTEEAVTQVRRLHNQYWTDYAAQSSLLTQSCLQKADD
LKVFCDRLKSEGLLVGVN
>Mature_577_residues
PQSRFLLWPLWFFAAVCFSAPFLVAPHTYPIPTFYAESASAWCWIAFSLVVLGLSWRGRASSPSIALAPLALIVVLIVQL
GIATPLNPFFSFAACICLLAAMVVCGLGARCREMPGVLEAVAVGTILGGLATVAVEQVHLWRLVGIPDILIGLPPTGLGR
RMWGNLNQPNHVASYFAFGLAACLFLWQRVRSLGLRILLGIVVLAFLFGTALSVSRVAWLHLIAVGLFAGWSWASQTTGR
RRWFVFVTPVLALTIAYQLCNWLMDYGNVLWQWGLPTSLGERMQQGAGLRPLLWNHAWHMFIAHPWLGAGWGDYAWNQYV
QTDVLGHVEMSMNAHNIVLDLLAKVGLAGLFAVVLPAVGLISLLWKFRMTPPAAFLWSVVAVLTIHSMLEYPLYYLYFLL
PFAFALGYLDTRMLRFPSPSMTWVLSGVIVVCVSALSARMWIDYKSVERLYYAPAGLSKELPVYQASGQMLLVPYATLAI
AINSGITYEMAAVMAALERQATQFYPGAATSQRYALTLAFQGKTEEAVTQVRRLHNQYWTDYAAQSSLLTQSCLQKADDL
KVFCDRLKSEGLLVGVN

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63942; Mature: 63811

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQSRFLLWPLWFFAAVCFSAPFLVAPHTYPIPTFYAESASAWCWIAFSLVVLGLSWRGR
CCCCCEEHHHHHHHHHHHHCCCCEECCCCCCCCCHHCCCCCHHHHHHHHHHHHCCCCCCC
ASSPSIALAPLALIVVLIVQLGIATPLNPFFSFAACICLLAAMVVCGLGARCREMPGVLE
CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHH
AVAVGTILGGLATVAVEQVHLWRLVGIPDILIGLPPTGLGRRMWGNLNQPNHVASYFAFG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHH
LAACLFLWQRVRSLGLRILLGIVVLAFLFGTALSVSRVAWLHLIAVGLFAGWSWASQTTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC
RRRWFVFVTPVLALTIAYQLCNWLMDYGNVLWQWGLPTSLGERMQQGAGLRPLLWNHAWH
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCCCCCHHHHHHHH
MFIAHPWLGAGWGDYAWNQYVQTDVLGHVEMSMNAHNIVLDLLAKVGLAGLFAVVLPAVG
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LISLLWKFRMTPPAAFLWSVVAVLTIHSMLEYPLYYLYFLLPFAFALGYLDTRMLRFPSP
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SMTWVLSGVIVVCVSALSARMWIDYKSVERLYYAPAGLSKELPVYQASGQMLLVPYATLA
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCEECCCCEEEEEHHHHH
IAINSGITYEMAAVMAALERQATQFYPGAATSQRYALTLAFQGKTEEAVTQVRRLHNQYW
HHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHH
TDYAAQSSLLTQSCLQKADDLKVFCDRLKSEGLLVGVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC
>Mature Secondary Structure 
PQSRFLLWPLWFFAAVCFSAPFLVAPHTYPIPTFYAESASAWCWIAFSLVVLGLSWRGR
CCCCEEHHHHHHHHHHHHCCCCEECCCCCCCCCHHCCCCCHHHHHHHHHHHHCCCCCCC
ASSPSIALAPLALIVVLIVQLGIATPLNPFFSFAACICLLAAMVVCGLGARCREMPGVLE
CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHH
AVAVGTILGGLATVAVEQVHLWRLVGIPDILIGLPPTGLGRRMWGNLNQPNHVASYFAFG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHH
LAACLFLWQRVRSLGLRILLGIVVLAFLFGTALSVSRVAWLHLIAVGLFAGWSWASQTTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC
RRRWFVFVTPVLALTIAYQLCNWLMDYGNVLWQWGLPTSLGERMQQGAGLRPLLWNHAWH
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCCCCCHHHHHHHH
MFIAHPWLGAGWGDYAWNQYVQTDVLGHVEMSMNAHNIVLDLLAKVGLAGLFAVVLPAVG
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LISLLWKFRMTPPAAFLWSVVAVLTIHSMLEYPLYYLYFLLPFAFALGYLDTRMLRFPSP
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SMTWVLSGVIVVCVSALSARMWIDYKSVERLYYAPAGLSKELPVYQASGQMLLVPYATLA
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCEECCCCEEEEEHHHHH
IAINSGITYEMAAVMAALERQATQFYPGAATSQRYALTLAFQGKTEEAVTQVRRLHNQYW
HHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHH
TDYAAQSSLLTQSCLQKADDLKVFCDRLKSEGLLVGVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA