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The map label for this gene is 187927150

Identifier: 187927150

GI number: 187927150

Start: 52114

End: 52941

Strand: Direct

Name: 187927150

Synonym: Rpic_0040

Alternate gene names: NA

Gene position: 52114-52941 (Clockwise)

Preceding gene: 187927149

Following gene: 187927152

Centisome position: 1.32

GC content: 60.51

Gene sequence:

>828_bases
GTGGCATCCAACGGCAAGAACCCCATCGACGACTGGTATTTCGACGGCAGCAGCAAGTTCAAGATCGCCAAGTTCGATCC
TGCCGCCAAACCGTGCACCACGGGCAGCAAGGCGGGTGACCTGGCGCGGCTGGCCGAACTGTCTGCGCGCATTGAGGCGC
TGCAGGACATCTTCTATGCCGAGCACCGCCGCAAGCTGCTGGTCGTGCTGCAGGGCATGGATACTGCGGGCAAGGATGGC
ACCGTACGCACCGTATTCCGTGCGCTCGACCCGCTCGGCCTGCGCGTGGTGGGCTTCAAGGTGCCCACGCCGCTGGAGTT
GGCGCATGACTTCCTGTGGCGGATCCATGCGGAGGTGCCGGCCGCAGGCGAGATCGTCATCTTCAATCGCAGCCATTACG
AAGATGTGCTTGTCACCCGCGTGCATGGAGACATCGATGCCGCCGAGAGCAAGCGCCGCTACGCTCACATCAATGCTTTC
GAGCAGATGCTGACCGAGACCGATACCACCATCGTCAAGTGCTTTTTACATATCTCCAAGGAGGAACAGCGCGATCGGCT
GCAGATGCGTATCGACGATCCGCAGAAGCACTGGAAGCTCGGGATGGCGGACATTGAAGAACGCAAGTTCTGGGAAGACT
ACATGGCCGCCTACGAAGACGCGATCAATGCCACAGCCACCCCGCACGCGCCGTGGCACATCATTCCAGCGAACTCCAAG
TCGCATCGCAGCCTGATGGTGGCGGAGATTCTGCTGCAGGTGATGGAGCGGTTGCAGCCGGAATATCCGGTGGGGAATCC
GGCGTTCTTGGGGTTGAAGATCGAATAG

Upstream 100 bases:

>100_bases
TGTTTGAAGGCACGCTGGATCTGGATGCGCTCAAGCTGACCGCTGCCCACTAGGCGCGCGGGAACTGCCCATTCGCCTGT
CTGAACAACAAGGAGACACC

Downstream 100 bases:

>100_bases
GGTGGTGGTTTGCGGCTCTTGCGCTGATGGTGCATCCCTCGCATCGGCCGCGGCAGGAGGATGAGCCACAAAAAACAAAA
CCCCGGCGAACAACATCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: URF2 [H]

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MASNGKNPIDDWYFDGSSKFKIAKFDPAAKPCTTGSKAGDLARLAELSARIEALQDIFYAEHRRKLLVVLQGMDTAGKDG
TVRTVFRALDPLGLRVVGFKVPTPLELAHDFLWRIHAEVPAAGEIVIFNRSHYEDVLVTRVHGDIDAAESKRRYAHINAF
EQMLTETDTTIVKCFLHISKEEQRDRLQMRIDDPQKHWKLGMADIEERKFWEDYMAAYEDAINATATPHAPWHIIPANSK
SHRSLMVAEILLQVMERLQPEYPVGNPAFLGLKIE

Sequences:

>Translated_275_residues
MASNGKNPIDDWYFDGSSKFKIAKFDPAAKPCTTGSKAGDLARLAELSARIEALQDIFYAEHRRKLLVVLQGMDTAGKDG
TVRTVFRALDPLGLRVVGFKVPTPLELAHDFLWRIHAEVPAAGEIVIFNRSHYEDVLVTRVHGDIDAAESKRRYAHINAF
EQMLTETDTTIVKCFLHISKEEQRDRLQMRIDDPQKHWKLGMADIEERKFWEDYMAAYEDAINATATPHAPWHIIPANSK
SHRSLMVAEILLQVMERLQPEYPVGNPAFLGLKIE
>Mature_274_residues
ASNGKNPIDDWYFDGSSKFKIAKFDPAAKPCTTGSKAGDLARLAELSARIEALQDIFYAEHRRKLLVVLQGMDTAGKDGT
VRTVFRALDPLGLRVVGFKVPTPLELAHDFLWRIHAEVPAAGEIVIFNRSHYEDVLVTRVHGDIDAAESKRRYAHINAFE
QMLTETDTTIVKCFLHISKEEQRDRLQMRIDDPQKHWKLGMADIEERKFWEDYMAAYEDAINATATPHAPWHIIPANSKS
HRSLMVAEILLQVMERLQPEYPVGNPAFLGLKIE

Specific function: Unknown

COG id: COG2326

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011993
- InterPro:   IPR022488 [H]

Pfam domain/function: PF03976 PPK2 [H]

EC number: NA

Molecular weight: Translated: 31222; Mature: 31091

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASNGKNPIDDWYFDGSSKFKIAKFDPAAKPCTTGSKAGDLARLAELSARIEALQDIFYA
CCCCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EHRRKLLVVLQGMDTAGKDGTVRTVFRALDPLGLRVVGFKVPTPLELAHDFLWRIHAEVP
HHCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCC
AAGEIVIFNRSHYEDVLVTRVHGDIDAAESKRRYAHINAFEQMLTETDTTIVKCFLHISK
CCCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EEQRDRLQMRIDDPQKHWKLGMADIEERKFWEDYMAAYEDAINATATPHAPWHIIPANSK
HHHHHHHEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCC
SHRSLMVAEILLQVMERLQPEYPVGNPAFLGLKIE
CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEC
>Mature Secondary Structure 
ASNGKNPIDDWYFDGSSKFKIAKFDPAAKPCTTGSKAGDLARLAELSARIEALQDIFYA
CCCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EHRRKLLVVLQGMDTAGKDGTVRTVFRALDPLGLRVVGFKVPTPLELAHDFLWRIHAEVP
HHCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCC
AAGEIVIFNRSHYEDVLVTRVHGDIDAAESKRRYAHINAFEQMLTETDTTIVKCFLHISK
CCCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EEQRDRLQMRIDDPQKHWKLGMADIEERKFWEDYMAAYEDAINATATPHAPWHIIPANSK
HHHHHHHEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCC
SHRSLMVAEILLQVMERLQPEYPVGNPAFLGLKIE
CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8199775 [H]