| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187935280
Identifier: 187935280
GI number: 187935280
Start: 2372426
End: 2373499
Strand: Reverse
Name: 187935280
Synonym: CLL_A2302
Alternate gene names: NA
Gene position: 2373499-2372426 (Counterclockwise)
Preceding gene: 187932352
Following gene: 187934324
Centisome position: 62.46
GC content: 27.0
Gene sequence:
>1074_bases ATGAAACCAGATTTTAATGAAGATGAAATTTTAGCTCTGTTAAATGATGTTACGATTACAGAGGATGAATTAAGCCCTTT GGAATTTAATGATATAGAAAAGAGAAATTTACGTAATAAAGTAATTAACAAGGTTAAAGAAAAAAGTTCAAAGATAAGGA ATTTTTCAAAAGCTGCATCTGTAATTTTAGTATGTTTAATAGTATTAGCAAGTACATCAGTAATTGCAGCTATAAATACA AAGATATTTGGAGACAATAAAGCAATTGAGCAAGCAGTCAAAAATAATTATGTCCAAACAGTAACTGTAGGTACTGTTAA TGATAATGGAGTAGGAATTCAATTAACTAACATTGTAATAGATAAAGCAAAATTTGCTTTGTCCTTTGATTTAAAATTTG ATAATCCAGAAATTCTAAAGAATTTACAATGTTTAAAGATGGATTTAGAAATAAAAGATGAAAAAGGGAGAATACTTTGG GGATACCATGGCCAAGACCTTTCAGATGAAAATGTATTGGGTGTTATTAGTTCATTGGATGATGACTTTGAAATTTTAGA TAAAGATAATGGAAAAGCAAGATATCACATTATACTGGATTCTGATGATAGAAATATTCCAGTTCTAAATAAGGTAGATA TAAATATAAGAGCGATTTCCCTTTATCGGAATGATAACCTAAATGATAATGCAGATGATATATCAGGAAAGTGGCAATTT AGTGTAGATGTAAATAGTGAATTCAAAAATAATAATAGTATATTTTTTACTGCAGATAATACTGATAATGAAGTTACTGT AAATACTGTAGAAACCACTCAAACAGGTACAGTAATAAAAATTGTTTGTCCTAAGAATGTAGATATAGATGTATTTAAAA ATGTTAATCTTATTGATGATAAGGCAGCAAGTAAAATTGTTACAGGTGTTGTAGGTACCCAATATGATGAAAATAATAAT GCTATTTATACAGTAACCTTTCCTATATCAACTTTTGATAATCCTAAAGATTTAAAGTTTGTAATTAAAGATTATAACGG AAGAAATGTTGAAATAAAACTAAATAGAATATAA
Upstream 100 bases:
>100_bases AATTTAACTTGTCCAAAGGTGCAGTTTACAACAGGTTATGGAGAACAAGAAATTCTATTATAGAAAAACTTAATGTTTCA TATAAAAAGGAGGAAGCAAA
Downstream 100 bases:
>100_bases TAAATAAAATTAAAAATGCTAAAATAATTTAAATAAACATATAAAAAATAGATAATTTAAAAAGGACTCTTTAATTGGTA CACAAATAATGCACAGTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MKPDFNEDEILALLNDVTITEDELSPLEFNDIEKRNLRNKVINKVKEKSSKIRNFSKAASVILVCLIVLASTSVIAAINT KIFGDNKAIEQAVKNNYVQTVTVGTVNDNGVGIQLTNIVIDKAKFALSFDLKFDNPEILKNLQCLKMDLEIKDEKGRILW GYHGQDLSDENVLGVISSLDDDFEILDKDNGKARYHIILDSDDRNIPVLNKVDINIRAISLYRNDNLNDNADDISGKWQF SVDVNSEFKNNNSIFFTADNTDNEVTVNTVETTQTGTVIKIVCPKNVDIDVFKNVNLIDDKAASKIVTGVVGTQYDENNN AIYTVTFPISTFDNPKDLKFVIKDYNGRNVEIKLNRI
Sequences:
>Translated_357_residues MKPDFNEDEILALLNDVTITEDELSPLEFNDIEKRNLRNKVINKVKEKSSKIRNFSKAASVILVCLIVLASTSVIAAINT KIFGDNKAIEQAVKNNYVQTVTVGTVNDNGVGIQLTNIVIDKAKFALSFDLKFDNPEILKNLQCLKMDLEIKDEKGRILW GYHGQDLSDENVLGVISSLDDDFEILDKDNGKARYHIILDSDDRNIPVLNKVDINIRAISLYRNDNLNDNADDISGKWQF SVDVNSEFKNNNSIFFTADNTDNEVTVNTVETTQTGTVIKIVCPKNVDIDVFKNVNLIDDKAASKIVTGVVGTQYDENNN AIYTVTFPISTFDNPKDLKFVIKDYNGRNVEIKLNRI >Mature_357_residues MKPDFNEDEILALLNDVTITEDELSPLEFNDIEKRNLRNKVINKVKEKSSKIRNFSKAASVILVCLIVLASTSVIAAINT KIFGDNKAIEQAVKNNYVQTVTVGTVNDNGVGIQLTNIVIDKAKFALSFDLKFDNPEILKNLQCLKMDLEIKDEKGRILW GYHGQDLSDENVLGVISSLDDDFEILDKDNGKARYHIILDSDDRNIPVLNKVDINIRAISLYRNDNLNDNADDISGKWQF SVDVNSEFKNNNSIFFTADNTDNEVTVNTVETTQTGTVIKIVCPKNVDIDVFKNVNLIDDKAASKIVTGVVGTQYDENNN AIYTVTFPISTFDNPKDLKFVIKDYNGRNVEIKLNRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40103; Mature: 40103
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPDFNEDEILALLNDVTITEDELSPLEFNDIEKRNLRNKVINKVKEKSSKIRNFSKAAS CCCCCCCCHHEEEEECCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VILVCLIVLASTSVIAAINTKIFGDNKAIEQAVKNNYVQTVTVGTVNDNGVGIQLTNIVI HHHHHHHHHHCCCEEEEEEEEEECCCHHHHHHHHCCCEEEEEEEEECCCCCEEEEEEEEE DKAKFALSFDLKFDNPEILKNLQCLKMDLEIKDEKGRILWGYHGQDLSDENVLGVISSLD ECEEEEEEEEEECCCHHHHCCCEEEEEEEEEECCCCCEEEEECCCCCCCCCHHHHHHCCC DDFEILDKDNGKARYHIILDSDDRNIPVLNKVDINIRAISLYRNDNLNDNADDISGKWQF CCEEEEECCCCCEEEEEEEECCCCCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCCEEEE SVDVNSEFKNNNSIFFTADNTDNEVTVNTVETTQTGTVIKIVCPKNVDIDVFKNVNLIDD EEEECCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCEEEEECCCCCCEEEECCCCEECC KAASKIVTGVVGTQYDENNNAIYTVTFPISTFDNPKDLKFVIKDYNGRNVEIKLNRI HHHHHHHHHHHCCEEECCCCEEEEEEEEECCCCCCCCEEEEEEECCCCEEEEEEECC >Mature Secondary Structure MKPDFNEDEILALLNDVTITEDELSPLEFNDIEKRNLRNKVINKVKEKSSKIRNFSKAAS CCCCCCCCHHEEEEECCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VILVCLIVLASTSVIAAINTKIFGDNKAIEQAVKNNYVQTVTVGTVNDNGVGIQLTNIVI HHHHHHHHHHCCCEEEEEEEEEECCCHHHHHHHHCCCEEEEEEEEECCCCCEEEEEEEEE DKAKFALSFDLKFDNPEILKNLQCLKMDLEIKDEKGRILWGYHGQDLSDENVLGVISSLD ECEEEEEEEEEECCCHHHHCCCEEEEEEEEEECCCCCEEEEECCCCCCCCCHHHHHHCCC DDFEILDKDNGKARYHIILDSDDRNIPVLNKVDINIRAISLYRNDNLNDNADDISGKWQF CCEEEEECCCCCEEEEEEEECCCCCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCCEEEE SVDVNSEFKNNNSIFFTADNTDNEVTVNTVETTQTGTVIKIVCPKNVDIDVFKNVNLIDD EEEECCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCEEEEECCCCCCEEEECCCCEECC KAASKIVTGVVGTQYDENNNAIYTVTFPISTFDNPKDLKFVIKDYNGRNVEIKLNRI HHHHHHHHHHHCCEEECCCCEEEEEEEEECCCCCCCCEEEEEEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA