| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is murQ
Identifier: 187934881
GI number: 187934881
Start: 3162314
End: 3163219
Strand: Reverse
Name: murQ
Synonym: CLL_A3059
Alternate gene names: 187934881
Gene position: 3163219-3162314 (Counterclockwise)
Preceding gene: 187935065
Following gene: 187934745
Centisome position: 83.24
GC content: 30.57
Gene sequence:
>906_bases ATGGGTAGTATAATTGATAATCTTGAAACAGAAAAAAGAAATATAAATAGTGAAAATATAGATATTATGAGTACATGTGA AATTATTAAAACTATAAATTCTGAAGATAAAAAAATTGCGTACGCAATTGAAAAGGTTATTCCTGAAATTGAAAAATTAA TTGATGCAACTTATGAAAAAATGTTATTTGGGGGGAGAGTTATATATATAGGAGCAGGTACTTCAGGGAGACTTGGAGTT TTAGATGCCAGTGAGTGTCCTCCAACTTATGGAGTTGATGCGTCTTTAGTTCAAGGAATTATTGCAGGAGGATATGGTGC TTTATTAAAAGCTAAAGAAGGTGCAGAAGATTCATTAACTCTTGCAAAAGAAGATTTAAAAGAGATTAAACTAAATTCTC ATGATACTGTCATAGGATTAGCAGCAAGTGGCAGAACTCCTTATGTAATTGGTGGATTAGATTATGCAAATGAAATAGGT GCTTTAACTGGAGCTATTTCTTGTGTAAACAATGCTCAAATTAGTCAACATGCTAAATATTTTATTGAAGCTATTGTTGG TGCAGAAGTAATAACAGGTAGCACTAGGATGAAGGCCGGTACGGCTCAAAAAATGATTCTAAATATGATTTCTACATCTC TTATGATAAAAAAAGGAAAAGTGTATCATAATTTAATGGTTGATGTTCAGCCAACCAATAAAAAATTAATAGAACGTTCT AAAAATATAATTGCAGAGTGTACAAATTCGTCTGTAGAAGAAGCAGAAAAAGCATTAATTGATAGCGGAAATCAGGTTAA AGTTGCGATGCTTATGTTGCTTACAAAGAAAGATAAGAAATCTTGCATTAATATTTTAAATGAAAATGATGGAAATATTT CAAAATCAATCAGAAATATTCCTTAA
Upstream 100 bases:
>100_bases CTTATTATTTACAACACAATTTTAGCTGTGTATATCTTGAAAATTTATTCCAAAAATTGTATAATTCAATAAATTAATAA TATTTTAGGAAGTGATATGA
Downstream 100 bases:
>100_bases ATGGTTTACTGCAGTTTAAATTAAAAGTTAGTAATGCCATGTTTCTATGTTATTTGCATATATAATCTTAAAGGTATTAT AAGTTGCAATACATCTAAAA
Product: N-acetylmuramic acid 6-phosphate etherase
Products: NA
Alternate protein names: MurNAc-6-P etherase; N-acetylmuramic acid 6-phosphate hydrolase; N-acetylmuramic acid 6-phosphate lyase
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MGSIIDNLETEKRNINSENIDIMSTCEIIKTINSEDKKIAYAIEKVIPEIEKLIDATYEKMLFGGRVIYIGAGTSGRLGV LDASECPPTYGVDASLVQGIIAGGYGALLKAKEGAEDSLTLAKEDLKEIKLNSHDTVIGLAASGRTPYVIGGLDYANEIG ALTGAISCVNNAQISQHAKYFIEAIVGAEVITGSTRMKAGTAQKMILNMISTSLMIKKGKVYHNLMVDVQPTNKKLIERS KNIIAECTNSSVEEAEKALIDSGNQVKVAMLMLLTKKDKKSCINILNENDGNISKSIRNIP
Sequences:
>Translated_301_residues MGSIIDNLETEKRNINSENIDIMSTCEIIKTINSEDKKIAYAIEKVIPEIEKLIDATYEKMLFGGRVIYIGAGTSGRLGV LDASECPPTYGVDASLVQGIIAGGYGALLKAKEGAEDSLTLAKEDLKEIKLNSHDTVIGLAASGRTPYVIGGLDYANEIG ALTGAISCVNNAQISQHAKYFIEAIVGAEVITGSTRMKAGTAQKMILNMISTSLMIKKGKVYHNLMVDVQPTNKKLIERS KNIIAECTNSSVEEAEKALIDSGNQVKVAMLMLLTKKDKKSCINILNENDGNISKSIRNIP >Mature_300_residues GSIIDNLETEKRNINSENIDIMSTCEIIKTINSEDKKIAYAIEKVIPEIEKLIDATYEKMLFGGRVIYIGAGTSGRLGVL DASECPPTYGVDASLVQGIIAGGYGALLKAKEGAEDSLTLAKEDLKEIKLNSHDTVIGLAASGRTPYVIGGLDYANEIGA LTGAISCVNNAQISQHAKYFIEAIVGAEVITGSTRMKAGTAQKMILNMISTSLMIKKGKVYHNLMVDVQPTNKKLIERSK NIIAECTNSSVEEAEKALIDSGNQVKVAMLMLLTKKDKKSCINILNENDGNISKSIRNIP
Specific function: Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
COG id: COG2103
COG function: function code R; Predicted sugar phosphate isomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SIS domain
Homologues:
Organism=Escherichia coli, GI1788768, Length=291, Percent_Identity=51.8900343642612, Blast_Score=287, Evalue=6e-79,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURQ_CLOBB (B2TPW8)
Other databases:
- EMBL: CP001056 - RefSeq: YP_001887245.1 - ProteinModelPortal: B2TPW8 - GeneID: 6295119 - GenomeReviews: CP001056_GR - KEGG: cbk:CLL_A3059 - HOGENOM: HBG703490 - OMA: HLLTEQI - HAMAP: MF_00068 - InterPro: IPR005486 - InterPro: IPR005488 - InterPro: IPR001347 - TIGRFAMs: TIGR00274
Pfam domain/function: PF01380 SIS
EC number: NA
Molecular weight: Translated: 32428; Mature: 32297
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: PS01272 GCKR; PS51464 SIS
Important sites: ACT_SITE 85-85 ACT_SITE 116-116
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSIIDNLETEKRNINSENIDIMSTCEIIKTINSEDKKIAYAIEKVIPEIEKLIDATYEK CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH MLFGGRVIYIGAGTSGRLGVLDASECPPTYGVDASLVQGIIAGGYGALLKAKEGAEDSLT HHHCCEEEEEECCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCHHHHHCCCCCCCHHHH LAKEDLKEIKLNSHDTVIGLAASGRTPYVIGGLDYANEIGALTGAISCVNNAQISQHAKY HHHHHHHHHCCCCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHH FIEAIVGAEVITGSTRMKAGTAQKMILNMISTSLMIKKGKVYHNLMVDVQPTNKKLIERS HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHH KNIIAECTNSSVEEAEKALIDSGNQVKVAMLMLLTKKDKKSCINILNENDGNISKSIRNI HHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHCCC P C >Mature Secondary Structure GSIIDNLETEKRNINSENIDIMSTCEIIKTINSEDKKIAYAIEKVIPEIEKLIDATYEK CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH MLFGGRVIYIGAGTSGRLGVLDASECPPTYGVDASLVQGIIAGGYGALLKAKEGAEDSLT HHHCCEEEEEECCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCHHHHHCCCCCCCHHHH LAKEDLKEIKLNSHDTVIGLAASGRTPYVIGGLDYANEIGALTGAISCVNNAQISQHAKY HHHHHHHHHCCCCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHH FIEAIVGAEVITGSTRMKAGTAQKMILNMISTSLMIKKGKVYHNLMVDVQPTNKKLIERS HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHH KNIIAECTNSSVEEAEKALIDSGNQVKVAMLMLLTKKDKKSCINILNENDGNISKSIRNI HHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHCCC P C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA