Definition Clostridium botulinum B str. Eklund 17B, complete genome.
Accession NC_010674
Length 3,800,327

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The map label for this gene is gpmI [H]

Identifier: 187934745

GI number: 187934745

Start: 3160581

End: 3162119

Strand: Reverse

Name: gpmI [H]

Synonym: CLL_A3058

Alternate gene names: 187934745

Gene position: 3162119-3160581 (Counterclockwise)

Preceding gene: 187934881

Following gene: 187935323

Centisome position: 83.21

GC content: 31.9

Gene sequence:

>1539_bases
ATGTCAAAGAGACCAGTTATGTTAATGATATTAGATGGTTTTGGAATAGCGCCAAAATCTGAAGGAAATGCTGTAAGCTT
AGCTAAAAAACCTAATTTTGATAGATTAGTAGCAAATTATCCAACATCACAATTACAAGCAAGTGGATTAGAAGTTGGAT
TACCAGAAGGACAAATGGGAAACTCAGAAGTAGGTCATTTAAATATTGGTTCTGGTAGAATAGTATATCAAGAATTAACT
AGAATTACTAAGGCTATTAAAGATGGAGATTTCTTTGAAAATGAATCTTTAATGAAAGCTATGACTAATGCTAAAAATAA
TAATTCTGCATTACACTTAATGGGATTATTATCAGATGGTGGAGTACATTCACACATCGAACATTTAAGAGGTCTTTTAG
AATTTGCTAAAAAAGAAGGAATTCAAAATGTATATGTTCATGCATTTATGGATGGTAGAGACGTTGCACCGTCATCAGGT
AAAGAATTTGTAGAAAAAACTGAATCTATGATGGCTGAAGTTGGTATAGGTAAAATAGCTACTATAAGTGGTAGATATTA
TGCTATGGATAGAGATAATAGATGGGAAAGAGTAGAACTTGCTTATAATGCTTTAGTATTAGGTGAAGGTGAAACTGCTA
ATAGTGCAGTAGAAGCAATGGAAAAATCTTACCATGATAATAAAACTGATGAATTTGTTTTACCAACAGTAGTTTTAGAA
AATGGAGATCCAACAGCAACAATAAAAAATGGAGATTCAGTTATATTTTTTAACTTCAGACCAGATAGAGCAAGAGAAAT
AACTAGAGCTATTAATGATAAAGTATTTGATGGATTTAAGAGAGAAACTCTAAATCTTACTTTTGTAACAATGACTCAAT
ATGACAAGACTTTAGAAGGTGTTGAAGTAGCTTATAAGCCTCAAACTTTAGCTAATACTCTTGGAGAATATGTAAGTTCA
AAAGGATTAAATCAATTAAGAATTGCTGAGACTGAAAAATATGCTCACGTTACATTCTTCTTTAATGGTGGAGTTGAAAA
AGAAAATCCAGGTGAAGAAAGAGTTGTTATTCCATCACCTAAGGTTGCTACATATGATTTAAAACCAGAAATGAGTGCAT
ACGAAGTAACTGATGAGTTATTAAATAGATTAGATTCAGATAAGTATGATATGGTAATTTTAAACTTTGCAAATCCAGAT
ATGGTTGGACATACAGGGGTTATTCCAGCAGCTGTTAAAGCTATAGAATCTGTTGATGAATGCTTAGGAAAAATTGCTGA
CAAAATGTTAGAAAAAGATGGATGTTTATTCATAACAGCTGACCACGGTAATGCTGAAACTATGATAGACTTCTCAACAG
GAAATCCATTTACAGCGCATACAATAGATCCAGTACCTTTTGTTTGGATTGCAAATAACACAGAAGGAAAAACTATAAAA
GATGGTAAGCTAGCAGATATAGCTCCAACAATGTTAAATCAATTAGGATTAGAAGTTCCTGCTGAAATGACAGGAGAAAA
TTTAGTGACAACTAAATAA

Upstream 100 bases:

>100_bases
CTAAAAAAATAATATAATTAAAATGGTTAAAAATATAGAGAATAAAAGATAATATTAGTATATTATGATATTTTAATAAT
AAATCTGGAGGGATAGGAAT

Downstream 100 bases:

>100_bases
TAAATGATTTTTAAAAGGGTTTAGTAAAAATAAATTACTAGACTCTTTTTTTATGGAAATTTTTAAATTAAATATGTTTT
AGCCCAGAGTTTATATATTC

Product: phosphoglyceromutase

Products: NA

Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM [H]

Number of amino acids: Translated: 512; Mature: 511

Protein sequence:

>512_residues
MSKRPVMLMILDGFGIAPKSEGNAVSLAKKPNFDRLVANYPTSQLQASGLEVGLPEGQMGNSEVGHLNIGSGRIVYQELT
RITKAIKDGDFFENESLMKAMTNAKNNNSALHLMGLLSDGGVHSHIEHLRGLLEFAKKEGIQNVYVHAFMDGRDVAPSSG
KEFVEKTESMMAEVGIGKIATISGRYYAMDRDNRWERVELAYNALVLGEGETANSAVEAMEKSYHDNKTDEFVLPTVVLE
NGDPTATIKNGDSVIFFNFRPDRAREITRAINDKVFDGFKRETLNLTFVTMTQYDKTLEGVEVAYKPQTLANTLGEYVSS
KGLNQLRIAETEKYAHVTFFFNGGVEKENPGEERVVIPSPKVATYDLKPEMSAYEVTDELLNRLDSDKYDMVILNFANPD
MVGHTGVIPAAVKAIESVDECLGKIADKMLEKDGCLFITADHGNAETMIDFSTGNPFTAHTIDPVPFVWIANNTEGKTIK
DGKLADIAPTMLNQLGLEVPAEMTGENLVTTK

Sequences:

>Translated_512_residues
MSKRPVMLMILDGFGIAPKSEGNAVSLAKKPNFDRLVANYPTSQLQASGLEVGLPEGQMGNSEVGHLNIGSGRIVYQELT
RITKAIKDGDFFENESLMKAMTNAKNNNSALHLMGLLSDGGVHSHIEHLRGLLEFAKKEGIQNVYVHAFMDGRDVAPSSG
KEFVEKTESMMAEVGIGKIATISGRYYAMDRDNRWERVELAYNALVLGEGETANSAVEAMEKSYHDNKTDEFVLPTVVLE
NGDPTATIKNGDSVIFFNFRPDRAREITRAINDKVFDGFKRETLNLTFVTMTQYDKTLEGVEVAYKPQTLANTLGEYVSS
KGLNQLRIAETEKYAHVTFFFNGGVEKENPGEERVVIPSPKVATYDLKPEMSAYEVTDELLNRLDSDKYDMVILNFANPD
MVGHTGVIPAAVKAIESVDECLGKIADKMLEKDGCLFITADHGNAETMIDFSTGNPFTAHTIDPVPFVWIANNTEGKTIK
DGKLADIAPTMLNQLGLEVPAEMTGENLVTTK
>Mature_511_residues
SKRPVMLMILDGFGIAPKSEGNAVSLAKKPNFDRLVANYPTSQLQASGLEVGLPEGQMGNSEVGHLNIGSGRIVYQELTR
ITKAIKDGDFFENESLMKAMTNAKNNNSALHLMGLLSDGGVHSHIEHLRGLLEFAKKEGIQNVYVHAFMDGRDVAPSSGK
EFVEKTESMMAEVGIGKIATISGRYYAMDRDNRWERVELAYNALVLGEGETANSAVEAMEKSYHDNKTDEFVLPTVVLEN
GDPTATIKNGDSVIFFNFRPDRAREITRAINDKVFDGFKRETLNLTFVTMTQYDKTLEGVEVAYKPQTLANTLGEYVSSK
GLNQLRIAETEKYAHVTFFFNGGVEKENPGEERVVIPSPKVATYDLKPEMSAYEVTDELLNRLDSDKYDMVILNFANPDM
VGHTGVIPAAVKAIESVDECLGKIADKMLEKDGCLFITADHGNAETMIDFSTGNPFTAHTIDPVPFVWIANNTEGKTIKD
GKLADIAPTMLNQLGLEVPAEMTGENLVTTK

Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]

COG id: COG0696

COG function: function code G; Phosphoglyceromutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BPG-independent phosphoglycerate mutase family [H]

Homologues:

Organism=Escherichia coli, GI1790041, Length=510, Percent_Identity=52.5490196078431, Blast_Score=546, Evalue=1e-156,
Organism=Caenorhabditis elegans, GI32564249, Length=514, Percent_Identity=46.8871595330739, Blast_Score=448, Evalue=1e-126,
Organism=Caenorhabditis elegans, GI17507741, Length=513, Percent_Identity=46.7836257309941, Blast_Score=447, Evalue=1e-126,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR011258
- InterPro:   IPR006124
- InterPro:   IPR005995 [H]

Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme [H]

EC number: =5.4.2.1 [H]

Molecular weight: Translated: 56329; Mature: 56197

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS00156 OMPDECASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRPVMLMILDGFGIAPKSEGNAVSLAKKPNFDRLVANYPTSQLQASGLEVGLPEGQMG
CCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCHHEECCCHHHHCCCCCEEECCCCCCC
NSEVGHLNIGSGRIVYQELTRITKAIKDGDFFENESLMKAMTNAKNNNSALHLMGLLSDG
CCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEECCC
GVHSHIEHLRGLLEFAKKEGIQNVYVHAFMDGRDVAPSSGKEFVEKTESMMAEVGIGKIA
CHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
TISGRYYAMDRDNRWERVELAYNALVLGEGETANSAVEAMEKSYHDNKTDEFVLPTVVLE
EECCEEEEECCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEE
NGDPTATIKNGDSVIFFNFRPDRAREITRAINDKVFDGFKRETLNLTFVTMTQYDKTLEG
CCCCEEEEECCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCHHCC
VEVAYKPQTLANTLGEYVSSKGLNQLRIAETEKYAHVTFFFNGGVEKENPGEERVVIPSP
CEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEEECCCCCCCCCCCEEEECCC
KVATYDLKPEMSAYEVTDELLNRLDSDKYDMVILNFANPDMVGHTGVIPAAVKAIESVDE
CEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHH
CLGKIADKMLEKDGCLFITADHGNAETMIDFSTGNPFTAHTIDPVPFVWIANNTEGKTIK
HHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEEECCCCCEEC
DGKLADIAPTMLNQLGLEVPAEMTGENLVTTK
CCCCHHHHHHHHHHCCCCCCHHHCCCEEECCC
>Mature Secondary Structure 
SKRPVMLMILDGFGIAPKSEGNAVSLAKKPNFDRLVANYPTSQLQASGLEVGLPEGQMG
CCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCHHEECCCHHHHCCCCCEEECCCCCCC
NSEVGHLNIGSGRIVYQELTRITKAIKDGDFFENESLMKAMTNAKNNNSALHLMGLLSDG
CCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEECCC
GVHSHIEHLRGLLEFAKKEGIQNVYVHAFMDGRDVAPSSGKEFVEKTESMMAEVGIGKIA
CHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
TISGRYYAMDRDNRWERVELAYNALVLGEGETANSAVEAMEKSYHDNKTDEFVLPTVVLE
EECCEEEEECCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEE
NGDPTATIKNGDSVIFFNFRPDRAREITRAINDKVFDGFKRETLNLTFVTMTQYDKTLEG
CCCCEEEEECCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCHHCC
VEVAYKPQTLANTLGEYVSSKGLNQLRIAETEKYAHVTFFFNGGVEKENPGEERVVIPSP
CEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEEECCCCCCCCCCCEEEECCC
KVATYDLKPEMSAYEVTDELLNRLDSDKYDMVILNFANPDMVGHTGVIPAAVKAIESVDE
CEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHH
CLGKIADKMLEKDGCLFITADHGNAETMIDFSTGNPFTAHTIDPVPFVWIANNTEGKTIK
HHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEEECCCCCEEC
DGKLADIAPTMLNQLGLEVPAEMTGENLVTTK
CCCCHHHHHHHHHHCCCCCCHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA