| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is gpmI [H]
Identifier: 187934745
GI number: 187934745
Start: 3160581
End: 3162119
Strand: Reverse
Name: gpmI [H]
Synonym: CLL_A3058
Alternate gene names: 187934745
Gene position: 3162119-3160581 (Counterclockwise)
Preceding gene: 187934881
Following gene: 187935323
Centisome position: 83.21
GC content: 31.9
Gene sequence:
>1539_bases ATGTCAAAGAGACCAGTTATGTTAATGATATTAGATGGTTTTGGAATAGCGCCAAAATCTGAAGGAAATGCTGTAAGCTT AGCTAAAAAACCTAATTTTGATAGATTAGTAGCAAATTATCCAACATCACAATTACAAGCAAGTGGATTAGAAGTTGGAT TACCAGAAGGACAAATGGGAAACTCAGAAGTAGGTCATTTAAATATTGGTTCTGGTAGAATAGTATATCAAGAATTAACT AGAATTACTAAGGCTATTAAAGATGGAGATTTCTTTGAAAATGAATCTTTAATGAAAGCTATGACTAATGCTAAAAATAA TAATTCTGCATTACACTTAATGGGATTATTATCAGATGGTGGAGTACATTCACACATCGAACATTTAAGAGGTCTTTTAG AATTTGCTAAAAAAGAAGGAATTCAAAATGTATATGTTCATGCATTTATGGATGGTAGAGACGTTGCACCGTCATCAGGT AAAGAATTTGTAGAAAAAACTGAATCTATGATGGCTGAAGTTGGTATAGGTAAAATAGCTACTATAAGTGGTAGATATTA TGCTATGGATAGAGATAATAGATGGGAAAGAGTAGAACTTGCTTATAATGCTTTAGTATTAGGTGAAGGTGAAACTGCTA ATAGTGCAGTAGAAGCAATGGAAAAATCTTACCATGATAATAAAACTGATGAATTTGTTTTACCAACAGTAGTTTTAGAA AATGGAGATCCAACAGCAACAATAAAAAATGGAGATTCAGTTATATTTTTTAACTTCAGACCAGATAGAGCAAGAGAAAT AACTAGAGCTATTAATGATAAAGTATTTGATGGATTTAAGAGAGAAACTCTAAATCTTACTTTTGTAACAATGACTCAAT ATGACAAGACTTTAGAAGGTGTTGAAGTAGCTTATAAGCCTCAAACTTTAGCTAATACTCTTGGAGAATATGTAAGTTCA AAAGGATTAAATCAATTAAGAATTGCTGAGACTGAAAAATATGCTCACGTTACATTCTTCTTTAATGGTGGAGTTGAAAA AGAAAATCCAGGTGAAGAAAGAGTTGTTATTCCATCACCTAAGGTTGCTACATATGATTTAAAACCAGAAATGAGTGCAT ACGAAGTAACTGATGAGTTATTAAATAGATTAGATTCAGATAAGTATGATATGGTAATTTTAAACTTTGCAAATCCAGAT ATGGTTGGACATACAGGGGTTATTCCAGCAGCTGTTAAAGCTATAGAATCTGTTGATGAATGCTTAGGAAAAATTGCTGA CAAAATGTTAGAAAAAGATGGATGTTTATTCATAACAGCTGACCACGGTAATGCTGAAACTATGATAGACTTCTCAACAG GAAATCCATTTACAGCGCATACAATAGATCCAGTACCTTTTGTTTGGATTGCAAATAACACAGAAGGAAAAACTATAAAA GATGGTAAGCTAGCAGATATAGCTCCAACAATGTTAAATCAATTAGGATTAGAAGTTCCTGCTGAAATGACAGGAGAAAA TTTAGTGACAACTAAATAA
Upstream 100 bases:
>100_bases CTAAAAAAATAATATAATTAAAATGGTTAAAAATATAGAGAATAAAAGATAATATTAGTATATTATGATATTTTAATAAT AAATCTGGAGGGATAGGAAT
Downstream 100 bases:
>100_bases TAAATGATTTTTAAAAGGGTTTAGTAAAAATAAATTACTAGACTCTTTTTTTATGGAAATTTTTAAATTAAATATGTTTT AGCCCAGAGTTTATATATTC
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM [H]
Number of amino acids: Translated: 512; Mature: 511
Protein sequence:
>512_residues MSKRPVMLMILDGFGIAPKSEGNAVSLAKKPNFDRLVANYPTSQLQASGLEVGLPEGQMGNSEVGHLNIGSGRIVYQELT RITKAIKDGDFFENESLMKAMTNAKNNNSALHLMGLLSDGGVHSHIEHLRGLLEFAKKEGIQNVYVHAFMDGRDVAPSSG KEFVEKTESMMAEVGIGKIATISGRYYAMDRDNRWERVELAYNALVLGEGETANSAVEAMEKSYHDNKTDEFVLPTVVLE NGDPTATIKNGDSVIFFNFRPDRAREITRAINDKVFDGFKRETLNLTFVTMTQYDKTLEGVEVAYKPQTLANTLGEYVSS KGLNQLRIAETEKYAHVTFFFNGGVEKENPGEERVVIPSPKVATYDLKPEMSAYEVTDELLNRLDSDKYDMVILNFANPD MVGHTGVIPAAVKAIESVDECLGKIADKMLEKDGCLFITADHGNAETMIDFSTGNPFTAHTIDPVPFVWIANNTEGKTIK DGKLADIAPTMLNQLGLEVPAEMTGENLVTTK
Sequences:
>Translated_512_residues MSKRPVMLMILDGFGIAPKSEGNAVSLAKKPNFDRLVANYPTSQLQASGLEVGLPEGQMGNSEVGHLNIGSGRIVYQELT RITKAIKDGDFFENESLMKAMTNAKNNNSALHLMGLLSDGGVHSHIEHLRGLLEFAKKEGIQNVYVHAFMDGRDVAPSSG KEFVEKTESMMAEVGIGKIATISGRYYAMDRDNRWERVELAYNALVLGEGETANSAVEAMEKSYHDNKTDEFVLPTVVLE NGDPTATIKNGDSVIFFNFRPDRAREITRAINDKVFDGFKRETLNLTFVTMTQYDKTLEGVEVAYKPQTLANTLGEYVSS KGLNQLRIAETEKYAHVTFFFNGGVEKENPGEERVVIPSPKVATYDLKPEMSAYEVTDELLNRLDSDKYDMVILNFANPD MVGHTGVIPAAVKAIESVDECLGKIADKMLEKDGCLFITADHGNAETMIDFSTGNPFTAHTIDPVPFVWIANNTEGKTIK DGKLADIAPTMLNQLGLEVPAEMTGENLVTTK >Mature_511_residues SKRPVMLMILDGFGIAPKSEGNAVSLAKKPNFDRLVANYPTSQLQASGLEVGLPEGQMGNSEVGHLNIGSGRIVYQELTR ITKAIKDGDFFENESLMKAMTNAKNNNSALHLMGLLSDGGVHSHIEHLRGLLEFAKKEGIQNVYVHAFMDGRDVAPSSGK EFVEKTESMMAEVGIGKIATISGRYYAMDRDNRWERVELAYNALVLGEGETANSAVEAMEKSYHDNKTDEFVLPTVVLEN GDPTATIKNGDSVIFFNFRPDRAREITRAINDKVFDGFKRETLNLTFVTMTQYDKTLEGVEVAYKPQTLANTLGEYVSSK GLNQLRIAETEKYAHVTFFFNGGVEKENPGEERVVIPSPKVATYDLKPEMSAYEVTDELLNRLDSDKYDMVILNFANPDM VGHTGVIPAAVKAIESVDECLGKIADKMLEKDGCLFITADHGNAETMIDFSTGNPFTAHTIDPVPFVWIANNTEGKTIKD GKLADIAPTMLNQLGLEVPAEMTGENLVTTK
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0696
COG function: function code G; Phosphoglyceromutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family [H]
Homologues:
Organism=Escherichia coli, GI1790041, Length=510, Percent_Identity=52.5490196078431, Blast_Score=546, Evalue=1e-156, Organism=Caenorhabditis elegans, GI32564249, Length=514, Percent_Identity=46.8871595330739, Blast_Score=448, Evalue=1e-126, Organism=Caenorhabditis elegans, GI17507741, Length=513, Percent_Identity=46.7836257309941, Blast_Score=447, Evalue=1e-126,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR011258 - InterPro: IPR006124 - InterPro: IPR005995 [H]
Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 56329; Mature: 56197
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS00156 OMPDECASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRPVMLMILDGFGIAPKSEGNAVSLAKKPNFDRLVANYPTSQLQASGLEVGLPEGQMG CCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCHHEECCCHHHHCCCCCEEECCCCCCC NSEVGHLNIGSGRIVYQELTRITKAIKDGDFFENESLMKAMTNAKNNNSALHLMGLLSDG CCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEECCC GVHSHIEHLRGLLEFAKKEGIQNVYVHAFMDGRDVAPSSGKEFVEKTESMMAEVGIGKIA CHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEE TISGRYYAMDRDNRWERVELAYNALVLGEGETANSAVEAMEKSYHDNKTDEFVLPTVVLE EECCEEEEECCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEE NGDPTATIKNGDSVIFFNFRPDRAREITRAINDKVFDGFKRETLNLTFVTMTQYDKTLEG CCCCEEEEECCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCHHCC VEVAYKPQTLANTLGEYVSSKGLNQLRIAETEKYAHVTFFFNGGVEKENPGEERVVIPSP CEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEEECCCCCCCCCCCEEEECCC KVATYDLKPEMSAYEVTDELLNRLDSDKYDMVILNFANPDMVGHTGVIPAAVKAIESVDE CEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHH CLGKIADKMLEKDGCLFITADHGNAETMIDFSTGNPFTAHTIDPVPFVWIANNTEGKTIK HHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEEECCCCCEEC DGKLADIAPTMLNQLGLEVPAEMTGENLVTTK CCCCHHHHHHHHHHCCCCCCHHHCCCEEECCC >Mature Secondary Structure SKRPVMLMILDGFGIAPKSEGNAVSLAKKPNFDRLVANYPTSQLQASGLEVGLPEGQMG CCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCHHEECCCHHHHCCCCCEEECCCCCCC NSEVGHLNIGSGRIVYQELTRITKAIKDGDFFENESLMKAMTNAKNNNSALHLMGLLSDG CCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEECCC GVHSHIEHLRGLLEFAKKEGIQNVYVHAFMDGRDVAPSSGKEFVEKTESMMAEVGIGKIA CHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEE TISGRYYAMDRDNRWERVELAYNALVLGEGETANSAVEAMEKSYHDNKTDEFVLPTVVLE EECCEEEEECCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEE NGDPTATIKNGDSVIFFNFRPDRAREITRAINDKVFDGFKRETLNLTFVTMTQYDKTLEG CCCCEEEEECCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCHHCC VEVAYKPQTLANTLGEYVSSKGLNQLRIAETEKYAHVTFFFNGGVEKENPGEERVVIPSP CEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEEECCCCCCCCCCCEEEECCC KVATYDLKPEMSAYEVTDELLNRLDSDKYDMVILNFANPDMVGHTGVIPAAVKAIESVDE CEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHH CLGKIADKMLEKDGCLFITADHGNAETMIDFSTGNPFTAHTIDPVPFVWIANNTEGKTIK HHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEEECCCCCEEC DGKLADIAPTMLNQLGLEVPAEMTGENLVTTK CCCCHHHHHHHHHHCCCCCCHHHCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA