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The map label for this gene is 187935065

Identifier: 187935065

GI number: 187935065

Start: 3166226

End: 3166777

Strand: Reverse

Name: 187935065

Synonym: CLL_A3062

Alternate gene names: NA

Gene position: 3166777-3166226 (Counterclockwise)

Preceding gene: 187933535

Following gene: 187934881

Centisome position: 83.33

GC content: 25.18

Gene sequence:

>552_bases
ATGCAAATAAATTCTATTACATCAACAAATAGTTATACTCAAAGTAGTAGTGTGAATAATAGTAGTCAAATATCAAGTCT
TCAAAGCAGTAAGCAAGAATTAGAGATTGAAAGAAATGAATTATTACAAAATAATGAAATAGATGATGAAACTAAGCAAT
CACAGATACAATCGATAGAGTCTCAAATACAATTAATAGAATCTCAAATTCAAGCTGCTAAATCACAAAAATCTGAAAGT
TCAGCAGAGTCACAAAATTCAAATACCAAAGCAAATGAATCATATGATAATGGTGATGAAGTAAGAAATGGTGTGGTAAT
ATCATCTAGTTTAAAAGAAAAATTGCAAGATGGAAATTATAAAGAAATAAATAATGAAGAAAAATTATTAGAAATGCAAA
AAAAAGATAGAGAACATAATAAAGTATATACTTACAATGAAGTACATACTTATACAAAAGATAATATAGAAGAAAGTAAA
AAGCATATGAATGAATATATAGATGAAAATAAACAATCTAAAAATGAAGAACAAGAGATTTCGGAGCAATAA

Upstream 100 bases:

>100_bases
ATAGATATATATATTAAATTTGGATCAAGATTAAGCTACTGTTAAGCTTACTGATATACACTATTCTTGAATTAGAAAAA
GATTCAAGGAGGAGATTTTA

Downstream 100 bases:

>100_bases
TAAAGTACTCTATATTAAAGATAGATTAAATGAAATTAAAAATAATAAATAAATATCGACAATAATATAATTGGAAAAGA
GTTAAAGCTAAAATGAATGT

Product: viral A-type inclusion protein repeat

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MQINSITSTNSYTQSSSVNNSSQISSLQSSKQELEIERNELLQNNEIDDETKQSQIQSIESQIQLIESQIQAAKSQKSES
SAESQNSNTKANESYDNGDEVRNGVVISSSLKEKLQDGNYKEINNEEKLLEMQKKDREHNKVYTYNEVHTYTKDNIEESK
KHMNEYIDENKQSKNEEQEISEQ

Sequences:

>Translated_183_residues
MQINSITSTNSYTQSSSVNNSSQISSLQSSKQELEIERNELLQNNEIDDETKQSQIQSIESQIQLIESQIQAAKSQKSES
SAESQNSNTKANESYDNGDEVRNGVVISSSLKEKLQDGNYKEINNEEKLLEMQKKDREHNKVYTYNEVHTYTKDNIEESK
KHMNEYIDENKQSKNEEQEISEQ
>Mature_183_residues
MQINSITSTNSYTQSSSVNNSSQISSLQSSKQELEIERNELLQNNEIDDETKQSQIQSIESQIQLIESQIQAAKSQKSES
SAESQNSNTKANESYDNGDEVRNGVVISSSLKEKLQDGNYKEINNEEKLLEMQKKDREHNKVYTYNEVHTYTKDNIEESK
KHMNEYIDENKQSKNEEQEISEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21079; Mature: 21079

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQINSITSTNSYTQSSSVNNSSQISSLQSSKQELEIERNELLQNNEIDDETKQSQIQSIE
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
SQIQLIESQIQAAKSQKSESSAESQNSNTKANESYDNGDEVRNGVVISSSLKEKLQDGNY
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCEEEHHHHHHHHHCCCC
KEINNEEKLLEMQKKDREHNKVYTYNEVHTYTKDNIEESKKHMNEYIDENKQSKNEEQEI
CCCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
SEQ
CCC
>Mature Secondary Structure
MQINSITSTNSYTQSSSVNNSSQISSLQSSKQELEIERNELLQNNEIDDETKQSQIQSIE
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
SQIQLIESQIQAAKSQKSESSAESQNSNTKANESYDNGDEVRNGVVISSSLKEKLQDGNY
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCEEEHHHHHHHHHCCCC
KEINNEEKLLEMQKKDREHNKVYTYNEVHTYTKDNIEESKKHMNEYIDENKQSKNEEQEI
CCCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
SEQ
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA