| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is ilvA [H]
Identifier: 187934635
GI number: 187934635
Start: 1095082
End: 1096302
Strand: Reverse
Name: ilvA [H]
Synonym: CLL_A1070
Alternate gene names: 187934635
Gene position: 1096302-1095082 (Counterclockwise)
Preceding gene: 187933818
Following gene: 187934145
Centisome position: 28.85
GC content: 30.63
Gene sequence:
>1221_bases ATGATGACATTAGAGAAATTTCAACAAGCATATGAGACAGTACAAAAAGTAATATTACAAACGAATTTAGTTTATAGTGA TTATTATTCTGATTGTACCGGAAATAAAATATACTTGAAACCTGAAAATTTACAAAAAACTGGGGCTTATAAAATTAGAG GTGCTTATTATAAAATTAGTACTCTTACTGATGAAGAAAGAAACAAGGGCTTAATAACAGCATCTGCTGGTAATCATGCT CAAGGTGTTGCATATGCTGCTCAATTATATAATGTTAATGCTGTAATTGTAATGCCAACTACTACTCCACTTATAAAAGT AAATCGTACAAAAGCATATGGTGCTGAAGTAATATTATATGGTGATGTTTATGATGAAGCTTGTACTTATGCTTTAGAAC TTGCAAAACAAAAGGGATATACATTTATTCATCCATTTGATGATTTAGATGTTGCAACAGGGCAAGGTTCTATTGCCATG GAAATATTAAAAGATTTACCTACCGTTGATATAATTTTAGTTCCAATTGGTGGTGGCGGACTTGCCACTGGTGTTTCTAC TTTAGCTAAACTTCTTAAGCCTAATATTAAGGTTATAGGCGTTGAACCTTACGGTGCTAATTGTATGGAATCTTCATTAA AAGCTGGACATGTTGTAACCCTTCAAAAAGTTGATACTATAGCAGATGGTACTGCTGTAAAAACTCCTGGAACTAACATT TTCCCATATATACAAAAAAATATCGATGAAATTATAACTATTAAAGATCATGAATTAATAGTTGCATTCTTAGATATGTT AGAAAATCATAAAATGCTTGCAGAAAATTCTGGTTTACTAACAGTTGCCGCACTAAAGCATTTAAATGTAAAAGGTAAAA ATATTGTATCAATTATAAGCGGTGGAAATATGGATGTAATAACTTTTGCATCTTTAGTACAACATGGCTTAATAGAACGA GAACGTATCTGTGCATTATCTGTTTTACTTCCTGATAAACCTGGTGAACTAACAAATGTATCTAAAGTAATCGCTGAAGC TCAAGGAAATATTATAAGACTTGACCATAATCAATTTGTCAGTATAAATAGAAATAGTGCTGTTGAACTTAAGATAACAA TGGAGACTTTTGGTCCTGAACATAAAAATTCAATAATAAAAGCTTTAAAAGACAATGGATATCATCCTAACGTTTTAAAA CCTAAAAATATTTATCAATAA
Upstream 100 bases:
>100_bases CTTTTTTTTCTTACTTGACATTAATTTTTCAAGTGTTATTATAAAAATATCAAATGCCATATTTTATTAAATATACATTA AAAAGGGGGTTATATAAAAT
Downstream 100 bases:
>100_bases GTATTTTTTAATCTTTTATTATGTATAGTAAAACTCTAACCAAATTTAATTGGTTAGAGTTTTAATCCATTATATATTCT TTTTTATATATTCTTTAAGT
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MMTLEKFQQAYETVQKVILQTNLVYSDYYSDCTGNKIYLKPENLQKTGAYKIRGAYYKISTLTDEERNKGLITASAGNHA QGVAYAAQLYNVNAVIVMPTTTPLIKVNRTKAYGAEVILYGDVYDEACTYALELAKQKGYTFIHPFDDLDVATGQGSIAM EILKDLPTVDIILVPIGGGGLATGVSTLAKLLKPNIKVIGVEPYGANCMESSLKAGHVVTLQKVDTIADGTAVKTPGTNI FPYIQKNIDEIITIKDHELIVAFLDMLENHKMLAENSGLLTVAALKHLNVKGKNIVSIISGGNMDVITFASLVQHGLIER ERICALSVLLPDKPGELTNVSKVIAEAQGNIIRLDHNQFVSINRNSAVELKITMETFGPEHKNSIIKALKDNGYHPNVLK PKNIYQ
Sequences:
>Translated_406_residues MMTLEKFQQAYETVQKVILQTNLVYSDYYSDCTGNKIYLKPENLQKTGAYKIRGAYYKISTLTDEERNKGLITASAGNHA QGVAYAAQLYNVNAVIVMPTTTPLIKVNRTKAYGAEVILYGDVYDEACTYALELAKQKGYTFIHPFDDLDVATGQGSIAM EILKDLPTVDIILVPIGGGGLATGVSTLAKLLKPNIKVIGVEPYGANCMESSLKAGHVVTLQKVDTIADGTAVKTPGTNI FPYIQKNIDEIITIKDHELIVAFLDMLENHKMLAENSGLLTVAALKHLNVKGKNIVSIISGGNMDVITFASLVQHGLIER ERICALSVLLPDKPGELTNVSKVIAEAQGNIIRLDHNQFVSINRNSAVELKITMETFGPEHKNSIIKALKDNGYHPNVLK PKNIYQ >Mature_406_residues MMTLEKFQQAYETVQKVILQTNLVYSDYYSDCTGNKIYLKPENLQKTGAYKIRGAYYKISTLTDEERNKGLITASAGNHA QGVAYAAQLYNVNAVIVMPTTTPLIKVNRTKAYGAEVILYGDVYDEACTYALELAKQKGYTFIHPFDDLDVATGQGSIAM EILKDLPTVDIILVPIGGGGLATGVSTLAKLLKPNIKVIGVEPYGANCMESSLKAGHVVTLQKVDTIADGTAVKTPGTNI FPYIQKNIDEIITIKDHELIVAFLDMLENHKMLAENSGLLTVAALKHLNVKGKNIVSIISGGNMDVITFASLVQHGLIER ERICALSVLLPDKPGELTNVSKVIAEAQGNIIRLDHNQFVSINRNSAVELKITMETFGPEHKNSIIKALKDNGYHPNVLK PKNIYQ
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=325, Percent_Identity=34.1538461538462, Blast_Score=179, Evalue=5e-45, Organism=Homo sapiens, GI19923959, Length=299, Percent_Identity=32.7759197324415, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI33469958, Length=303, Percent_Identity=31.3531353135314, Blast_Score=97, Evalue=3e-20, Organism=Escherichia coli, GI1790207, Length=388, Percent_Identity=36.0824742268041, Blast_Score=225, Evalue=3e-60, Organism=Escherichia coli, GI1789505, Length=309, Percent_Identity=36.8932038834951, Blast_Score=198, Evalue=4e-52, Organism=Caenorhabditis elegans, GI71991565, Length=357, Percent_Identity=36.6946778711485, Blast_Score=221, Evalue=7e-58, Organism=Caenorhabditis elegans, GI17537387, Length=399, Percent_Identity=35.0877192982456, Blast_Score=208, Evalue=4e-54, Organism=Caenorhabditis elegans, GI17508781, Length=309, Percent_Identity=29.7734627831715, Blast_Score=134, Evalue=9e-32, Organism=Saccharomyces cerevisiae, GI6322631, Length=306, Percent_Identity=38.2352941176471, Blast_Score=204, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6320930, Length=319, Percent_Identity=37.9310344827586, Blast_Score=202, Evalue=6e-53, Organism=Saccharomyces cerevisiae, GI6319788, Length=260, Percent_Identity=28.8461538461538, Blast_Score=100, Evalue=3e-22, Organism=Drosophila melanogaster, GI21355833, Length=364, Percent_Identity=31.8681318681319, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI24645328, Length=296, Percent_Identity=29.0540540540541, Blast_Score=119, Evalue=3e-27,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR005787 - InterPro: IPR001721 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 44425; Mature: 44425
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTLEKFQQAYETVQKVILQTNLVYSDYYSDCTGNKIYLKPENLQKTGAYKIRGAYYKIS CCCHHHHHHHHHHHHHHHHHHCCEEEHHHCCCCCCEEEECCCCCCCCCCEEEEEEEEEEE TLTDEERNKGLITASAGNHAQGVAYAAQLYNVNAVIVMPTTTPLIKVNRTKAYGAEVILY ECCCCCCCCEEEEECCCCCCCHHHEEEEEECCEEEEEEECCCCEEEEECCCCCCCEEEEE GDVYDEACTYALELAKQKGYTFIHPFDDLDVATGQGSIAMEILKDLPTVDIILVPIGGGG ECCHHHHHHHHHHHHHHCCCEEECCCCCCCEECCCCHHHHHHHHHCCCEEEEEEEECCCH LATGVSTLAKLLKPNIKVIGVEPYGANCMESSLKAGHVVTLQKVDTIADGTAVKTPGTNI HHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHCCCCCEEEEEEHHHHCCCCEEECCCCCC FPYIQKNIDEIITIKDHELIVAFLDMLENHKMLAENSGLLTVAALKHLNVKGKNIVSIIS CHHHHCCCCCEEEECCCHHHHHHHHHHHCCCEEECCCCEEEEEEHHHCCCCCCEEEEEEE GGNMDVITFASLVQHGLIERERICALSVLLPDKPGELTNVSKVIAEAQGNIIRLDHNQFV CCCCHHHHHHHHHHHCCCCHHHEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCEE SINRNSAVELKITMETFGPEHKNSIIKALKDNGYHPNVLKPKNIYQ EECCCCEEEEEEEEHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MMTLEKFQQAYETVQKVILQTNLVYSDYYSDCTGNKIYLKPENLQKTGAYKIRGAYYKIS CCCHHHHHHHHHHHHHHHHHHCCEEEHHHCCCCCCEEEECCCCCCCCCCEEEEEEEEEEE TLTDEERNKGLITASAGNHAQGVAYAAQLYNVNAVIVMPTTTPLIKVNRTKAYGAEVILY ECCCCCCCCEEEEECCCCCCCHHHEEEEEECCEEEEEEECCCCEEEEECCCCCCCEEEEE GDVYDEACTYALELAKQKGYTFIHPFDDLDVATGQGSIAMEILKDLPTVDIILVPIGGGG ECCHHHHHHHHHHHHHHCCCEEECCCCCCCEECCCCHHHHHHHHHCCCEEEEEEEECCCH LATGVSTLAKLLKPNIKVIGVEPYGANCMESSLKAGHVVTLQKVDTIADGTAVKTPGTNI HHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHCCCCCEEEEEEHHHHCCCCEEECCCCCC FPYIQKNIDEIITIKDHELIVAFLDMLENHKMLAENSGLLTVAALKHLNVKGKNIVSIIS CHHHHCCCCCEEEECCCHHHHHHHHHHHCCCEEECCCCEEEEEEHHHCCCCCCEEEEEEE GGNMDVITFASLVQHGLIERERICALSVLLPDKPGELTNVSKVIAEAQGNIIRLDHNQFV CCCCHHHHHHHHHHHCCCCHHHEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCEE SINRNSAVELKITMETFGPEHKNSIIKALKDNGYHPNVLKPKNIYQ EECCCCEEEEEEEEHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11248100 [H]