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The map label for this gene is 187934625

Identifier: 187934625

GI number: 187934625

Start: 86925

End: 87830

Strand: Reverse

Name: 187934625

Synonym: CLL_A0080

Alternate gene names: NA

Gene position: 87830-86925 (Counterclockwise)

Preceding gene: 187933911

Following gene: 187933927

Centisome position: 2.31

GC content: 28.59

Gene sequence:

>906_bases
ATGAAATATTCAAATATGTTAGAAGAATGTACTCTTTGCTATAGGGAGTGTAAAGTTAATAGATTAAATAATGAACTAGG
ATTTTGTAGGGCTTCTAAAAATGTGAAGGTTGCAAGAGCTTCCTTACATCTTTGGGAAGAGCCACCTATTTCATCTGGAA
AAGGTTCTGGTACTGTATTTTTTTCACATTGTAATTTAAATTGTGTTTTTTGCCAAAACCATGATATAAGTCAGGAATTT
AAAGGAATGGATATATCAATAAAAAGACTTGCTGACATATTTTTAGAACTTCAAGAAAAAGGAGCTAATAACATAAATTT
AGTTACCCCAACTCATTATGTACCACAAATAATTGAGGCTCTAGAAATTTCTAAATCTAAAGGATTAAATATACCTATAC
TCTATAATACAAACACTTATGATTCACTTGAAACAATTAAGTCTCTGGATGGATATATAGATGTTTATCTTCCTGATTTT
AAATATTTTAATGATAAATATTCTATAAAATATTCTAAAGCTAGCGATTATAGTATAAATGCCATAAAAATTATAGATGA
AATGGTACGACAAACTGGTGAAGTTAATTTTGACTCAGAATCTCATATTACTAAAGGTGTTATTGTTAGACACTTACTTC
TTCCAGGCTTACTTTTTGATTCAAAGAAAGTTGTAGATTTGCTATTTAACAGATACGGAGATAATATCTATATTAGTCTA
ATGAATCAATATATCCCTATGTTTAAAGCCTGTGATTATCCTGAAATAAATAAACCTCTAAATCCAAAGCATTATGATAG
TTTAATTGATTATGCCGTAAATATTGGTTTGAAAAATGGCTTTATACAAGATCAAGGAACTAACACAACAGATTTTATCC
CATCTTTTAATGGCGAGGGAATATAA

Upstream 100 bases:

>100_bases
TCTAAATATTAACATTTTAAAACATAATCATTAAATAATATCTCATGATATAATAAACAGTATTAGAATTATGTTTATAT
TAAATATCGAGGAGATAATT

Downstream 100 bases:

>100_bases
AAAAGAAATGCTTCAAATTATTTGAAGCATTTCTTTTTTTCTATACAAAATAATTAAAACTTGGAATTTCTCTATTTGCT
TGTTGTATAGTCATTGGTGG

Product: radical SAM protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MKYSNMLEECTLCYRECKVNRLNNELGFCRASKNVKVARASLHLWEEPPISSGKGSGTVFFSHCNLNCVFCQNHDISQEF
KGMDISIKRLADIFLELQEKGANNINLVTPTHYVPQIIEALEISKSKGLNIPILYNTNTYDSLETIKSLDGYIDVYLPDF
KYFNDKYSIKYSKASDYSINAIKIIDEMVRQTGEVNFDSESHITKGVIVRHLLLPGLLFDSKKVVDLLFNRYGDNIYISL
MNQYIPMFKACDYPEINKPLNPKHYDSLIDYAVNIGLKNGFIQDQGTNTTDFIPSFNGEGI

Sequences:

>Translated_301_residues
MKYSNMLEECTLCYRECKVNRLNNELGFCRASKNVKVARASLHLWEEPPISSGKGSGTVFFSHCNLNCVFCQNHDISQEF
KGMDISIKRLADIFLELQEKGANNINLVTPTHYVPQIIEALEISKSKGLNIPILYNTNTYDSLETIKSLDGYIDVYLPDF
KYFNDKYSIKYSKASDYSINAIKIIDEMVRQTGEVNFDSESHITKGVIVRHLLLPGLLFDSKKVVDLLFNRYGDNIYISL
MNQYIPMFKACDYPEINKPLNPKHYDSLIDYAVNIGLKNGFIQDQGTNTTDFIPSFNGEGI
>Mature_301_residues
MKYSNMLEECTLCYRECKVNRLNNELGFCRASKNVKVARASLHLWEEPPISSGKGSGTVFFSHCNLNCVFCQNHDISQEF
KGMDISIKRLADIFLELQEKGANNINLVTPTHYVPQIIEALEISKSKGLNIPILYNTNTYDSLETIKSLDGYIDVYLPDF
KYFNDKYSIKYSKASDYSINAIKIIDEMVRQTGEVNFDSESHITKGVIVRHLLLPGLLFDSKKVVDLLFNRYGDNIYISL
MNQYIPMFKACDYPEINKPLNPKHYDSLIDYAVNIGLKNGFIQDQGTNTTDFIPSFNGEGI

Specific function: Unknown

COG id: COG1313

COG function: function code R; Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016431
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 34329; Mature: 34329

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYSNMLEECTLCYRECKVNRLNNELGFCRASKNVKVARASLHLWEEPPISSGKGSGTVF
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEEEEECCCCCCCCCCCCCEEE
FSHCNLNCVFCQNHDISQEFKGMDISIKRLADIFLELQEKGANNINLVTPTHYVPQIIEA
EEECCEEEEEECCCCCHHHHCCCCEEHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHH
LEISKSKGLNIPILYNTNTYDSLETIKSLDGYIDVYLPDFKYFNDKYSIKYSKASDYSIN
HHHHHCCCCEEEEEECCCCHHHHHHHHHCCCEEEEEECCCEECCCEEEEEECCCCCCCCH
AIKIIDEMVRQTGEVNFDSESHITKGVIVRHLLLPGLLFDSKKVVDLLFNRYGDNIYISL
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEE
MNQYIPMFKACDYPEINKPLNPKHYDSLIDYAVNIGLKNGFIQDQGTNTTDFIPSFNGEG
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCC
I
C
>Mature Secondary Structure
MKYSNMLEECTLCYRECKVNRLNNELGFCRASKNVKVARASLHLWEEPPISSGKGSGTVF
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEEEEECCCCCCCCCCCCCEEE
FSHCNLNCVFCQNHDISQEFKGMDISIKRLADIFLELQEKGANNINLVTPTHYVPQIIEA
EEECCEEEEEECCCCCHHHHCCCCEEHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHH
LEISKSKGLNIPILYNTNTYDSLETIKSLDGYIDVYLPDFKYFNDKYSIKYSKASDYSIN
HHHHHCCCCEEEEEECCCCHHHHHHHHHCCCEEEEEECCCEECCCEEEEEECCCCCCCCH
AIKIIDEMVRQTGEVNFDSESHITKGVIVRHLLLPGLLFDSKKVVDLLFNRYGDNIYISL
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEE
MNQYIPMFKACDYPEINKPLNPKHYDSLIDYAVNIGLKNGFIQDQGTNTTDFIPSFNGEG
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCC
I
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]