Definition Clostridium botulinum B str. Eklund 17B, complete genome.
Accession NC_010674
Length 3,800,327

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The map label for this gene is glnA [H]

Identifier: 187933927

GI number: 187933927

Start: 78671

End: 80563

Strand: Reverse

Name: glnA [H]

Synonym: CLL_A0073

Alternate gene names: 187933927

Gene position: 80563-78671 (Counterclockwise)

Preceding gene: 187934625

Following gene: 187935260

Centisome position: 2.12

GC content: 28.63

Gene sequence:

>1893_bases
ATGAATAATTTACTTTATGTTATTAAAAAAGAGAATCATAACGCTAAAGACCTAAATGCAATATTGAATGAGAACAGCCA
AATTAAGTTTGTTTCATTTGTTGGTATTGATTTATCTGGTAATGATACTGATGAAAAAATACCTGTTAAACTTTTCTTAG
AAAATATAGATTCATATTTAAATGGAATTGCGGTTCAAACAGATGGTTCTTCCGTTGTATTGCCTGGCATTGCTACATTA
AACAATGCTAAAGTTGATATGATTACTGATCTAGACAGTAAATGGTTTGTTGATTATAACTTTAATTTTACAGACCCTGA
AACTAGCAAACCTGTAGGTACATTAAGAATACCATGTTTCTTATACCATGATAATAAACCTGTTGATTCTAGACATATTC
TTAAGGCATCTGCCTCTACAGTTAAAGAAACCCTTTCTAACCTTTTTAAAAACAAACCTGAACTTTTAAATGTTTATGAT
ATTACCCCTGATGATATAGATGATATAATCGTTACTTCTGCTACTGAATTAGAATTTTGGGTTAAAACACCTAATGAAAA
TGCTGAAGTAGAAGAATTATCAACTTCTCAAGTACTACATGAACATTATTGGACAAGAACTAAAGGTTCAGTAAGAACTG
CACTTGAAGAAACACTTCTTTTAATGGAAAAATATGATTTTGAACCTGAAATGGGTCATAAAGAAGTTGGTGGAGTAAGA
GCCAAATTAAATTCATCTGGTAACTTCGATCACGTTATGGAACAAATAGAAATAGATTGGAAATATTCTGACGTTCTTCA
AGCTGCTGATAATGAGCTATTTGTAAGAATATTGACTCAAGAAACATTTAGAAGAAATGGACTTGAAGTAACATTCATGG
CTAAACCAATAGAAGAAGTAGCTGGATCTGGAATGCATGTTCATTTAAGTATTAGTTTAAAATTAAAGAACGGAAAAAGA
ATAAACATATTTAATGGACCTAAAAACCATTTCTTAAGTGTAATAGGATATGGAGCTATAATGGGAGTTCTTAAAAATTA
TGAAGTTATGAATCCATTTATTTCTTCAACAAACAACTCATTAAGAAGATTAAAACCAGGATTTGAAGCACCTGTATGTA
TAGTAACTTCACTTGGTAAAAGTCCTGAAAATCCATCAAGAAATAGATCTATATTAGTTGGATTAATTAGAGATTTAGAT
TCTCCTTTAGCTACTAGATTTGAGCTTAGATCTCCAAATCCACATACAAATACTTATATTGCGATGGCTGTTTCTTTCAT
GTCAATGCTTGATGGTATATTGTATGCTGTAAATAAAACAGAAGATGAATTACTTGCTGAATTGTCAAAAAAATCAGGTG
AGGATGCAGATTATCTTGAAAAAGAAAGAGCTTATAGAAGTGAAGAAGATGTATTTGAAGACTTCTCTGAAGAAGAAAGA
AATAAATTCTTCGGTATAGCTCCTGCAACTATTTATGAAAATTTATCACAATTAGAAAAATATCCTGAAAAAGTTGAAAT
ATTAAAGAAAAATAATGTAATGACATCTGATATAATAAACAGTTTTAAGTTAGCTACGTTACAAAGATGGACTACTGAAA
TCATTCATAGAATTATTAATAATTATATTAATGAAATAAGATCATTTGCACCTCTTCATTCATTAGATAAAGCCTTAGAT
TTGGATATATCTAATTGGATGAAAATAAATGATTTAAGAATGTATATAATGAAAGATACTTATACAACTAAAGGTTTATT
TACAAGAATTAAAATAGCCTTTATAAATAAAGATTACGAAACAGCATCAGAATTATATATTGAACTTGAAGATAAGATGA
AACTTCTTAGAAGTCTATATTCTTCTTACAAAAAAAATCTTTTAGATATATAA

Upstream 100 bases:

>100_bases
TGTTTTTTTTATCATTTGTTCGACATGAATTGAAATCAAATTTAAATTGTGAAAGGATGTGAATAGCAACTTACAGAATT
ATCTGTAACTGCTTATTATT

Downstream 100 bases:

>100_bases
ACAGAATTTCTATTAACTTTTTAGATTTAATTAGTTAAATGTAACTTATACTAAAATTAAAATATCTATAGAATTTATTA
ATCTTAGATATTCTATAAAT

Product: glutamine synthetase

Products: NA

Alternate protein names: GS; Glutamate--ammonia ligase [H]

Number of amino acids: Translated: 630; Mature: 630

Protein sequence:

>630_residues
MNNLLYVIKKENHNAKDLNAILNENSQIKFVSFVGIDLSGNDTDEKIPVKLFLENIDSYLNGIAVQTDGSSVVLPGIATL
NNAKVDMITDLDSKWFVDYNFNFTDPETSKPVGTLRIPCFLYHDNKPVDSRHILKASASTVKETLSNLFKNKPELLNVYD
ITPDDIDDIIVTSATELEFWVKTPNENAEVEELSTSQVLHEHYWTRTKGSVRTALEETLLLMEKYDFEPEMGHKEVGGVR
AKLNSSGNFDHVMEQIEIDWKYSDVLQAADNELFVRILTQETFRRNGLEVTFMAKPIEEVAGSGMHVHLSISLKLKNGKR
INIFNGPKNHFLSVIGYGAIMGVLKNYEVMNPFISSTNNSLRRLKPGFEAPVCIVTSLGKSPENPSRNRSILVGLIRDLD
SPLATRFELRSPNPHTNTYIAMAVSFMSMLDGILYAVNKTEDELLAELSKKSGEDADYLEKERAYRSEEDVFEDFSEEER
NKFFGIAPATIYENLSQLEKYPEKVEILKKNNVMTSDIINSFKLATLQRWTTEIIHRIINNYINEIRSFAPLHSLDKALD
LDISNWMKINDLRMYIMKDTYTTKGLFTRIKIAFINKDYETASELYIELEDKMKLLRSLYSSYKKNLLDI

Sequences:

>Translated_630_residues
MNNLLYVIKKENHNAKDLNAILNENSQIKFVSFVGIDLSGNDTDEKIPVKLFLENIDSYLNGIAVQTDGSSVVLPGIATL
NNAKVDMITDLDSKWFVDYNFNFTDPETSKPVGTLRIPCFLYHDNKPVDSRHILKASASTVKETLSNLFKNKPELLNVYD
ITPDDIDDIIVTSATELEFWVKTPNENAEVEELSTSQVLHEHYWTRTKGSVRTALEETLLLMEKYDFEPEMGHKEVGGVR
AKLNSSGNFDHVMEQIEIDWKYSDVLQAADNELFVRILTQETFRRNGLEVTFMAKPIEEVAGSGMHVHLSISLKLKNGKR
INIFNGPKNHFLSVIGYGAIMGVLKNYEVMNPFISSTNNSLRRLKPGFEAPVCIVTSLGKSPENPSRNRSILVGLIRDLD
SPLATRFELRSPNPHTNTYIAMAVSFMSMLDGILYAVNKTEDELLAELSKKSGEDADYLEKERAYRSEEDVFEDFSEEER
NKFFGIAPATIYENLSQLEKYPEKVEILKKNNVMTSDIINSFKLATLQRWTTEIIHRIINNYINEIRSFAPLHSLDKALD
LDISNWMKINDLRMYIMKDTYTTKGLFTRIKIAFINKDYETASELYIELEDKMKLLRSLYSSYKKNLLDI
>Mature_630_residues
MNNLLYVIKKENHNAKDLNAILNENSQIKFVSFVGIDLSGNDTDEKIPVKLFLENIDSYLNGIAVQTDGSSVVLPGIATL
NNAKVDMITDLDSKWFVDYNFNFTDPETSKPVGTLRIPCFLYHDNKPVDSRHILKASASTVKETLSNLFKNKPELLNVYD
ITPDDIDDIIVTSATELEFWVKTPNENAEVEELSTSQVLHEHYWTRTKGSVRTALEETLLLMEKYDFEPEMGHKEVGGVR
AKLNSSGNFDHVMEQIEIDWKYSDVLQAADNELFVRILTQETFRRNGLEVTFMAKPIEEVAGSGMHVHLSISLKLKNGKR
INIFNGPKNHFLSVIGYGAIMGVLKNYEVMNPFISSTNNSLRRLKPGFEAPVCIVTSLGKSPENPSRNRSILVGLIRDLD
SPLATRFELRSPNPHTNTYIAMAVSFMSMLDGILYAVNKTEDELLAELSKKSGEDADYLEKERAYRSEEDVFEDFSEEER
NKFFGIAPATIYENLSQLEKYPEKVEILKKNNVMTSDIINSFKLATLQRWTTEIIHRIINNYINEIRSFAPLHSLDKALD
LDISNWMKINDLRMYIMKDTYTTKGLFTRIKIAFINKDYETASELYIELEDKMKLLRSLYSSYKKNLLDI

Specific function: Unknown

COG id: COG0174

COG function: function code E; Glutamine synthetase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glutamine synthetase family [H]

Homologues:

Organism=Escherichia coli, GI1790301, Length=225, Percent_Identity=33.7777777777778, Blast_Score=104, Evalue=2e-23,

Paralogues:

None

Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 15324 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal medi

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008147
- InterPro:   IPR014746
- InterPro:   IPR008146
- InterPro:   IPR004809 [H]

Pfam domain/function: PF00120 Gln-synt_C; PF03951 Gln-synt_N [H]

EC number: =6.3.1.2 [H]

Molecular weight: Translated: 71985; Mature: 71985

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS00181 GLNA_ATP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNLLYVIKKENHNAKDLNAILNENSQIKFVSFVGIDLSGNDTDEKIPVKLFLENIDSYL
CCCEEEEEEECCCCHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHH
NGIAVQTDGSSVVLPGIATLNNAKVDMITDLDSKWFVDYNFNFTDPETSKPVGTLRIPCF
CCEEEEECCCEEEECCEEECCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEE
LYHDNKPVDSRHILKASASTVKETLSNLFKNKPELLNVYDITPDDIDDIIVTSATELEFW
EEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHEEECCCEEEEE
VKTPNENAEVEELSTSQVLHEHYWTRTKGSVRTALEETLLLMEKYDFEPEMGHKEVGGVR
EECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCEE
AKLNSSGNFDHVMEQIEIDWKYSDVLQAADNELFVRILTQETFRRNGLEVTFMAKPIEEV
EEECCCCCHHHHHHHHCCCCCHHHHHHHCCCCEEEEEHHHHHHHCCCCEEEEEECCHHHH
AGSGMHVHLSISLKLKNGKRINIFNGPKNHFLSVIGYGAIMGVLKNYEVMNPFISSTNNS
CCCCEEEEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHCHHHHCCCCH
LRRLKPGFEAPVCIVTSLGKSPENPSRNRSILVGLIRDLDSPLATRFELRSPNPHTNTYI
HHHCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHEEEECCCCCCCCHHH
AMAVSFMSMLDGILYAVNKTEDELLAELSKKSGEDADYLEKERAYRSEEDVFEDFSEEER
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHC
NKFFGIAPATIYENLSQLEKYPEKVEILKKNNVMTSDIINSFKLATLQRWTTEIIHRIIN
CCEEECCHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NYINEIRSFAPLHSLDKALDLDISNWMKINDLRMYIMKDTYTTKGLFTRIKIAFINKDYE
HHHHHHHHHCCHHHHHHHHCCCHHHCEEEEEEEEEEEECCCCCCCCEEEEEEEEECCCHH
TASELYIELEDKMKLLRSLYSSYKKNLLDI
CHHHHEEEEHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNNLLYVIKKENHNAKDLNAILNENSQIKFVSFVGIDLSGNDTDEKIPVKLFLENIDSYL
CCCEEEEEEECCCCHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHH
NGIAVQTDGSSVVLPGIATLNNAKVDMITDLDSKWFVDYNFNFTDPETSKPVGTLRIPCF
CCEEEEECCCEEEECCEEECCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEE
LYHDNKPVDSRHILKASASTVKETLSNLFKNKPELLNVYDITPDDIDDIIVTSATELEFW
EEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHEEECCCEEEEE
VKTPNENAEVEELSTSQVLHEHYWTRTKGSVRTALEETLLLMEKYDFEPEMGHKEVGGVR
EECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCEE
AKLNSSGNFDHVMEQIEIDWKYSDVLQAADNELFVRILTQETFRRNGLEVTFMAKPIEEV
EEECCCCCHHHHHHHHCCCCCHHHHHHHCCCCEEEEEHHHHHHHCCCCEEEEEECCHHHH
AGSGMHVHLSISLKLKNGKRINIFNGPKNHFLSVIGYGAIMGVLKNYEVMNPFISSTNNS
CCCCEEEEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHCHHHHCCCCH
LRRLKPGFEAPVCIVTSLGKSPENPSRNRSILVGLIRDLDSPLATRFELRSPNPHTNTYI
HHHCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHEEEECCCCCCCCHHH
AMAVSFMSMLDGILYAVNKTEDELLAELSKKSGEDADYLEKERAYRSEEDVFEDFSEEER
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHC
NKFFGIAPATIYENLSQLEKYPEKVEILKKNNVMTSDIINSFKLATLQRWTTEIIHRIIN
CCEEECCHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NYINEIRSFAPLHSLDKALDLDISNWMKINDLRMYIMKDTYTTKGLFTRIKIAFINKDYE
HHHHHHHHHCCHHHHHHHHCCCHHHCEEEEEEEEEEEECCCCCCCCEEEEEEEEECCCHH
TASELYIELEDKMKLLRSLYSSYKKNLLDI
CHHHHEEEEHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7916055 [H]