| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is ykvI [H]
Identifier: 187933911
GI number: 187933911
Start: 87980
End: 89038
Strand: Reverse
Name: ykvI [H]
Synonym: CLL_A0081
Alternate gene names: 187933911
Gene position: 89038-87980 (Counterclockwise)
Preceding gene: 187933779
Following gene: 187934625
Centisome position: 2.34
GC content: 26.72
Gene sequence:
>1059_bases TTGAAAAAGAGTTTTGTTAATATATTTCAAGTTGCAGTAGTTTTCATAGGTACTATTGTTGGAGCTGGATTAGCTTCAGG AAAAGAAATCACTGAATTTTTTACGTCTTTTGGACTAAAAAGTTTTTTTGGCATCATAGTCTGTGGAATATTTTATATTG TAATTGGATGTATAATCGCCAAAATAAGTATTCATTATGAGTTAAATTCTTATAGTGATTTGATTAATGTAATAAGCCCT AATTATTTGGGTAAATTTACAGGTTTTATAACTACTTTATATCTTATTTCAAGTGCCTCTATAATTTTAGCTGGTAGTGG TGCTCTTATAAATCAATTTTTTGGGATTCCTAAATTAGTTGGATCAATAATAATGATTTGCATAGCTATATTTTTCTTAT TAAGAGATACTGATGGATTAATTGCAGTAAATTCATTTATCGTTCCATCTTTAATTTGCACAATAACATTGATTACTATT TTATACTTTGTATTTTCTAGAGATGCGGTTTCTTTAGAAAGCATGAGACAATTCAAACCTATTAAGAGTGGACTTGCTAT ATCAACTATATTATATGCTGGTTATAATACGCTTTGTTGTACTGGTGTACTAGTTCCTCTAAGCAATCAAATGAAAAAAC CTAAAACTATGTTTATAGGAATTACTCTTGGAGCTATTGGATTAACTTTGCTTTGTTTAGCAATAAATCTTATGTTAACA GTAAATCAACCTTATATATACAAATTTGAAATTCCATTACTTCTTGTTGCAAATAGATTTGGTTGCATAATACAAGCTAT ATTATTAGTGATTATTTGGCTTGAAATGTTTTCTACTGAAGTTTCAGATGTTTATTCAATAAGTAAAACATTAGAGCAAA CTTTCAATATAGACTTTAAAAAAGGCATTTTTATAATTTTAGCAATAGCCTTACCAATATCTCAAATTGGATTTAGTAAT TTAATAACAAAATTATATCCAGCTTTTGGAGTATTAAGTTTAGTATTCATACTACAAAGTGTTATATTTTACTTTAAACA TAGAAAGGAATTAAAGTAA
Upstream 100 bases:
>100_bases TTTTTCCTAAGAAATGTAGTGTTATACGAGGAATTTAAGAATAAAAGATAAGTTTACATTATATACTTATTAGTGAAAAT ATTGTTAAGGAGAATTAAAA
Downstream 100 bases:
>100_bases TGTTGATATGTATATAAGTAAAATAGACGGCTTAATTAAACTTAAAAGTTCTAAATATTAACATTTTAAAACATAATCAT TAAATAATATCTCATGATAT
Product: transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MKKSFVNIFQVAVVFIGTIVGAGLASGKEITEFFTSFGLKSFFGIIVCGIFYIVIGCIIAKISIHYELNSYSDLINVISP NYLGKFTGFITTLYLISSASIILAGSGALINQFFGIPKLVGSIIMICIAIFFLLRDTDGLIAVNSFIVPSLICTITLITI LYFVFSRDAVSLESMRQFKPIKSGLAISTILYAGYNTLCCTGVLVPLSNQMKKPKTMFIGITLGAIGLTLLCLAINLMLT VNQPYIYKFEIPLLLVANRFGCIIQAILLVIIWLEMFSTEVSDVYSISKTLEQTFNIDFKKGIFIILAIALPISQIGFSN LITKLYPAFGVLSLVFILQSVIFYFKHRKELK
Sequences:
>Translated_352_residues MKKSFVNIFQVAVVFIGTIVGAGLASGKEITEFFTSFGLKSFFGIIVCGIFYIVIGCIIAKISIHYELNSYSDLINVISP NYLGKFTGFITTLYLISSASIILAGSGALINQFFGIPKLVGSIIMICIAIFFLLRDTDGLIAVNSFIVPSLICTITLITI LYFVFSRDAVSLESMRQFKPIKSGLAISTILYAGYNTLCCTGVLVPLSNQMKKPKTMFIGITLGAIGLTLLCLAINLMLT VNQPYIYKFEIPLLLVANRFGCIIQAILLVIIWLEMFSTEVSDVYSISKTLEQTFNIDFKKGIFIILAIALPISQIGFSN LITKLYPAFGVLSLVFILQSVIFYFKHRKELK >Mature_352_residues MKKSFVNIFQVAVVFIGTIVGAGLASGKEITEFFTSFGLKSFFGIIVCGIFYIVIGCIIAKISIHYELNSYSDLINVISP NYLGKFTGFITTLYLISSASIILAGSGALINQFFGIPKLVGSIIMICIAIFFLLRDTDGLIAVNSFIVPSLICTITLITI LYFVFSRDAVSLESMRQFKPIKSGLAISTILYAGYNTLCCTGVLVPLSNQMKKPKTMFIGITLGAIGLTLLCLAINLMLT VNQPYIYKFEIPLLLVANRFGCIIQAILLVIIWLEMFSTEVSDVYSISKTLEQTFNIDFKKGIFIILAIALPISQIGFSN LITKLYPAFGVLSLVFILQSVIFYFKHRKELK
Specific function: Unknown
COG id: COG3949
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38845; Mature: 38845
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSFVNIFQVAVVFIGTIVGAGLASGKEITEFFTSFGLKSFFGIIVCGIFYIVIGCIIA CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KISIHYELNSYSDLINVISPNYLGKFTGFITTLYLISSASIILAGSGALINQFFGIPKLV HHHHEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHCCHHHHH GSIIMICIAIFFLLRDTDGLIAVNSFIVPSLICTITLITILYFVFSRDAVSLESMRQFKP HHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH IKSGLAISTILYAGYNTLCCTGVLVPLSNQMKKPKTMFIGITLGAIGLTLLCLAINLMLT HHCCHHHHHHHHHCCCHHHHHHHHHCCHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHC VNQPYIYKFEIPLLLVANRFGCIIQAILLVIIWLEMFSTEVSDVYSISKTLEQTFNIDFK CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH KGIFIILAIALPISQIGFSNLITKLYPAFGVLSLVFILQSVIFYFKHRKELK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKSFVNIFQVAVVFIGTIVGAGLASGKEITEFFTSFGLKSFFGIIVCGIFYIVIGCIIA CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KISIHYELNSYSDLINVISPNYLGKFTGFITTLYLISSASIILAGSGALINQFFGIPKLV HHHHEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHCCHHHHH GSIIMICIAIFFLLRDTDGLIAVNSFIVPSLICTITLITILYFVFSRDAVSLESMRQFKP HHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH IKSGLAISTILYAGYNTLCCTGVLVPLSNQMKKPKTMFIGITLGAIGLTLLCLAINLMLT HHCCHHHHHHHHHCCCHHHHHHHHHCCHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHC VNQPYIYKFEIPLLLVANRFGCIIQAILLVIIWLEMFSTEVSDVYSISKTLEQTFNIDFK CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH KGIFIILAIALPISQIGFSNLITKLYPAFGVLSLVFILQSVIFYFKHRKELK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]