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The map label for this gene is yfcA [C]

Identifier: 187933776

GI number: 187933776

Start: 3679446

End: 3680195

Strand: Reverse

Name: yfcA [C]

Synonym: CLL_A3479

Alternate gene names: 187933776

Gene position: 3680195-3679446 (Counterclockwise)

Preceding gene: 187933450

Following gene: 187935775

Centisome position: 96.84

GC content: 26.8

Gene sequence:

>750_bases
ATGGAAGTATTATTAATAATATGTCCACTTGTATTTTTAGCAGGAATTATTGATGCTGTAGCAGGTGGTGGAGGTATAAT
ATCTTTGCCTGCATATATTTTTGCTGGAATACCAATTCATATTGCATATGGAACTAATAAATTTGCAAGTTGTATTGGTA
CTTCGATTTCATCAATAAAGTTTTTTAGAAGTGGAAACATAAAAATAAAATCAGCATTATTATCTGCAGCAGGAGCATTA
ATAGGATCTTGGTTTGGGGCACAAATAGTATTATTGCTAAATGAAAAATATTTAAATTATTGTTTAATAATAATTTTGCC
TATTGTTTCATTATTTTTATTGTTTAATAGAAGTTTTGGTGTTAAAAATAAAAAAGAACTATCTAATAAAAAGTTGTACA
TATTATCTTTTATTATTGGATTGTTTTTAGGTGCATATGATGGATTTTTTGGACCAGGAACTGGAACTTTTTTAGTTATA
TGTTTTACAGGAATATTAGGATTTAATCTTATAACTGCATCTGGAAATGCCAAAATTGTAAATTTAGCATCTAACTTTTC
TGCATTAATAGCATATATATTAGGTGGAAAAGTTATGTTTTCTATTGGTGTGCCAGCAGCTGTATGTGCAATAGCTGGCA
ATTATTTAGGGGCTCATTTAGCTATTAAAAATGGCGATAAGATAATAAAACCAATAATATTTGTTGCTATTGGTTTATTA
TTTATAAAAATTATATTTGATTTAATATAA

Upstream 100 bases:

>100_bases
TATAAAAACTGTAAATAGTTAAATATCAAGGTATTAATAGTTTGACACTTATTTGTATACCCCTTAAAATTAGAAGATAG
TAAATAATTAGGGGGATTAT

Downstream 100 bases:

>100_bases
AAGTTAGTAGGTTTTAAAGATTCAAGAACTTTATATTAAAAACCTTAGAAAAGATTATATAAAATAAATATTAAACGATA
TTACTTATAAGTAATATCGT

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MEVLLIICPLVFLAGIIDAVAGGGGIISLPAYIFAGIPIHIAYGTNKFASCIGTSISSIKFFRSGNIKIKSALLSAAGAL
IGSWFGAQIVLLLNEKYLNYCLIIILPIVSLFLLFNRSFGVKNKKELSNKKLYILSFIIGLFLGAYDGFFGPGTGTFLVI
CFTGILGFNLITASGNAKIVNLASNFSALIAYILGGKVMFSIGVPAAVCAIAGNYLGAHLAIKNGDKIIKPIIFVAIGLL
FIKIIFDLI

Sequences:

>Translated_249_residues
MEVLLIICPLVFLAGIIDAVAGGGGIISLPAYIFAGIPIHIAYGTNKFASCIGTSISSIKFFRSGNIKIKSALLSAAGAL
IGSWFGAQIVLLLNEKYLNYCLIIILPIVSLFLLFNRSFGVKNKKELSNKKLYILSFIIGLFLGAYDGFFGPGTGTFLVI
CFTGILGFNLITASGNAKIVNLASNFSALIAYILGGKVMFSIGVPAAVCAIAGNYLGAHLAIKNGDKIIKPIIFVAIGLL
FIKIIFDLI
>Mature_249_residues
MEVLLIICPLVFLAGIIDAVAGGGGIISLPAYIFAGIPIHIAYGTNKFASCIGTSISSIKFFRSGNIKIKSALLSAAGAL
IGSWFGAQIVLLLNEKYLNYCLIIILPIVSLFLLFNRSFGVKNKKELSNKKLYILSFIIGLFLGAYDGFFGPGTGTFLVI
CFTGILGFNLITASGNAKIVNLASNFSALIAYILGGKVMFSIGVPAAVCAIAGNYLGAHLAIKNGDKIIKPIIFVAIGLL
FIKIIFDLI

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

Organism=Escherichia coli, GI1788667, Length=237, Percent_Identity=34.1772151898734, Blast_Score=126, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 26350; Mature: 26350

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVLLIICPLVFLAGIIDAVAGGGGIISLPAYIFAGIPIHIAYGTNKFASCIGTSISSIK
CCHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCCEEEEECCCHHHHHHHCHHHHEE
FFRSGNIKIKSALLSAAGALIGSWFGAQIVLLLNEKYLNYCLIIILPIVSLFLLFNRSFG
EEECCCEEHHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCC
VKNKKELSNKKLYILSFIIGLFLGAYDGFFGPGTGTFLVICFTGILGFNLITASGNAKIV
CCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEEEECCCEEEE
NLASNFSALIAYILGGKVMFSIGVPAAVCAIAGNYLGAHLAIKNGDKIIKPIIFVAIGLL
EEHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHH
FIKIIFDLI
HHHHHHHHC
>Mature Secondary Structure
MEVLLIICPLVFLAGIIDAVAGGGGIISLPAYIFAGIPIHIAYGTNKFASCIGTSISSIK
CCHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCCEEEEECCCHHHHHHHCHHHHEE
FFRSGNIKIKSALLSAAGALIGSWFGAQIVLLLNEKYLNYCLIIILPIVSLFLLFNRSFG
EEECCCEEHHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCC
VKNKKELSNKKLYILSFIIGLFLGAYDGFFGPGTGTFLVICFTGILGFNLITASGNAKIV
CCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEEEECCCEEEE
NLASNFSALIAYILGGKVMFSIGVPAAVCAIAGNYLGAHLAIKNGDKIIKPIIFVAIGLL
EEHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHH
FIKIIFDLI
HHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]