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The map label for this gene is 187933450

Identifier: 187933450

GI number: 187933450

Start: 3680278

End: 3680958

Strand: Reverse

Name: 187933450

Synonym: CLL_A3480

Alternate gene names: NA

Gene position: 3680958-3680278 (Counterclockwise)

Preceding gene: 187934165

Following gene: 187933776

Centisome position: 96.86

GC content: 19.38

Gene sequence:

>681_bases
ATGAGTAATAATTTACAGACATCATATAAAGGTTATAAAACTAAACATTTTATAAATTCTGTATTAGGTATATTTAATGC
TTTGTTTACAATTTCAATTTCTGTAATTATTACATTAAATTTAACTTTTATATATAAGTTAACTATATATAAATACAATT
TATCAAAAGTCAGTGGATTAACTGTGGAAGAATTAATGGTTAACTATAAAAAAATAATAGTATATTTACAAAATCCATTT
ATTGAAAAGTTATATTTTCCTAATTTTCATATGAGTATTCAGGGAGAAATTCATTTTCAAGATGTAAAAAGAATATTTAT
GTATATTTATATATATATTTTTTTAGTCATGATATTACTAGGAGTATACTTTCTTATAAGAGATAAAATAAGGTATGATA
ATTATATAGAACTGAAATATATATTAAATAGTAGTGCTAATTATATACTTGTATTTGTTACATTTTTAATGTTATGTATT
TTAATTAATTTTTCAGAGATATTTAATACATTTCATAAAATATTTTTTAGGAATACTTATTGGGTATTTGACTCCAATCT
AGACCCAATAATTGATGTATTACCTGAAGAATTCTTTATGATAATGAGTGTGATTATACTGATATTTATATTAGTACATG
CCTTAATTTCAAAAATATATTATTATAAAAACTGTAAATAG

Upstream 100 bases:

>100_bases
ATTTAAAAGTTTAAATTAGATTACATAACTTGTATTATTTTACATTTTATTAGAGTATAATTATAATGTATTACATAAAT
AAAGATTATGGGGGTAATTT

Downstream 100 bases:

>100_bases
TTAAATATCAAGGTATTAATAGTTTGACACTTATTTGTATACCCCTTAAAATTAGAAGATAGTAAATAATTAGGGGGATT
ATATGGAAGTATTATTAATA

Product: integral membrane protein

Products: NA

Alternate protein names: Integral Membrane Protein TIGR; Rhodopsin-Like GPCR Superfamily Membrane Protein; Membrane Spanning Protein

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MSNNLQTSYKGYKTKHFINSVLGIFNALFTISISVIITLNLTFIYKLTIYKYNLSKVSGLTVEELMVNYKKIIVYLQNPF
IEKLYFPNFHMSIQGEIHFQDVKRIFMYIYIYIFLVMILLGVYFLIRDKIRYDNYIELKYILNSSANYILVFVTFLMLCI
LINFSEIFNTFHKIFFRNTYWVFDSNLDPIIDVLPEEFFMIMSVIILIFILVHALISKIYYYKNCK

Sequences:

>Translated_226_residues
MSNNLQTSYKGYKTKHFINSVLGIFNALFTISISVIITLNLTFIYKLTIYKYNLSKVSGLTVEELMVNYKKIIVYLQNPF
IEKLYFPNFHMSIQGEIHFQDVKRIFMYIYIYIFLVMILLGVYFLIRDKIRYDNYIELKYILNSSANYILVFVTFLMLCI
LINFSEIFNTFHKIFFRNTYWVFDSNLDPIIDVLPEEFFMIMSVIILIFILVHALISKIYYYKNCK
>Mature_225_residues
SNNLQTSYKGYKTKHFINSVLGIFNALFTISISVIITLNLTFIYKLTIYKYNLSKVSGLTVEELMVNYKKIIVYLQNPFI
EKLYFPNFHMSIQGEIHFQDVKRIFMYIYIYIFLVMILLGVYFLIRDKIRYDNYIELKYILNSSANYILVFVTFLMLCIL
INFSEIFNTFHKIFFRNTYWVFDSNLDPIIDVLPEEFFMIMSVIILIFILVHALISKIYYYKNCK

Specific function: Unknown

COG id: COG4478

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27119; Mature: 26988

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNNLQTSYKGYKTKHFINSVLGIFNALFTISISVIITLNLTFIYKLTIYKYNLSKVSGL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHEEEEEEEEEEHHHHCCC
TVEELMVNYKKIIVYLQNPFIEKLYFPNFHMSIQGEIHFQDVKRIFMYIYIYIFLVMILL
CHHHHHHHHHHHHEECCCCHHHHHCCCCEEEEEECCEEHHHHHHHHHHHHHHHHHHHHHH
GVYFLIRDKIRYDNYIELKYILNSSANYILVFVTFLMLCILINFSEIFNTFHKIFFRNTY
HHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
WVFDSNLDPIIDVLPEEFFMIMSVIILIFILVHALISKIYYYKNCK
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SNNLQTSYKGYKTKHFINSVLGIFNALFTISISVIITLNLTFIYKLTIYKYNLSKVSGL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHEEEEEEEEEEHHHHCCC
TVEELMVNYKKIIVYLQNPFIEKLYFPNFHMSIQGEIHFQDVKRIFMYIYIYIFLVMILL
CHHHHHHHHHHHHEECCCCHHHHHCCCCEEEEEECCEEHHHHHHHHHHHHHHHHHHHHHH
GVYFLIRDKIRYDNYIELKYILNSSANYILVFVTFLMLCILINFSEIFNTFHKIFFRNTY
HHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
WVFDSNLDPIIDVLPEEFFMIMSVIILIFILVHALISKIYYYKNCK
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA