| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is sacA [H]
Identifier: 187933523
GI number: 187933523
Start: 3652086
End: 3653543
Strand: Reverse
Name: sacA [H]
Synonym: CLL_A3456
Alternate gene names: 187933523
Gene position: 3653543-3652086 (Counterclockwise)
Preceding gene: 187934038
Following gene: 187932584
Centisome position: 96.14
GC content: 26.06
Gene sequence:
>1458_bases ATGCAGGATAAAAATGTATACGAAGAAATAAATAAAGATTTAGATCGGTACTATAAAAATTCAAATAATAGCAAATGGAG GAATAATTTCCATTTAGAAATGCCATTCGGTTTATTAAATGATCCTAATGGATTAAGCTATTACAATAATAAATTTCATA TATTTTATCAATGGAATCCATTTGGATGTGAACATAAAAATAAACATTGGGGGTTAGTAAAAACAAGTGATTTTATAAAT TTTACTAAGCCAGAAATAATATTAAAGCCTGTAGATTGGTTTGATAAAAATGGATGCTATTCAGGTGGAGCTTATGTTAA AGATGATACATTAAAATTATTTTATACTGGTAATGTAAAAGATGAAAATAACAATAGGGAATCGTATCAATGCATAGCCA ATTATTATAAAGATGGAACTTTTGAAAAGAAAGGACCAGTAATATTTAAGCAACCAGAAGGATATACAGCCCATTTTAGA GATCCGTTTATTTTTGAAGAAGACAATATTTATTATATGGTATTAGGTGTTCAAACTGATAGGTTAAAGGGAAGAACTTT ATTATACAAATCAATTGATATAGAAAAATGGGAGTTTATTGGAGAATTAAAAACTGATTTAGATGACTTTGGATACATGT GGGAATGTCCTAATTTAGTTAAAGTGAGTGATAATAAATTTGCATTTTTATTTTCACCACAAGGATTAGAGGCAGAAGAA TTAAGGAATCAAAATATATATCAATCAGGACATATAATAGGTGATTTAGATTTAAATGATGTTTCATTAAACAATCATAG CGACTTTAAAGAATTAGATATGGGATTTGATTTTTACGCACCCCAAGTATTTAAGCATGACAATCAGAATATAATGCTTG GATGGATAGGTATGCCAGATAAAGATTCAGAATATCTAAGTTCAAAGGAAGGTTGGATGTTTTCTTTAACAATGCCTAGA GCATTAGAATACAAAAATAATGTAATATATCAAAAACCATTGAAACAATTAGAAGCTTTAAGAGATAAAAAAGAAATAGA AATTAGTAATGATGAATTTGATTTATATAAGATGAAGCTTAATTCAAGAAATAAAGAAGTAAAATTAAATTTAGATATAA AAGAATCTGAAAATATAGAGATAGTATTTAATTTTGGAGATGAAAATATAAGATTAAATTATAATAAGAAATCTGAAGTG TGCACTATAGATAGAAATAATATGGAATTAGGCGGAAAAGGCATTAGAAAGTTTAAGTTAAAGGCTGAAGATAATCTTGA TCTACATATATTTATAGATAATTCAGTTATGGAAATATATTATCAGGATGGATTAGAAGTAACTACATTTATGTATTTCC CTAAAGAAGAGTGTTTAGATATTGAAATTAAAGATAATAGTAAAGTAAAAATTAATGAATTAAATGTATGGAATTTAAGG AGTGTAAGATATGAATAG
Upstream 100 bases:
>100_bases AATAAATGAAAAAGAGATAAATAAAGATGATAATAGTTCATTAAGGTTAATTGAAAGAGAAAGTGTAAGAAAAATAACTT AAACAAAAGAGAGGAAAACT
Downstream 100 bases:
>100_bases TAATGTTTTTTGTATTGGTGAACTTTTAATCGACATGGTATGTGTTGATAATAAAGGATTAAAATATGGAGAAAAATTTG AAAAAAAAGCAGGTGGAGCT
Product: sucrose-6-phosphate hydrolase
Products: NA
Alternate protein names: Sucrase; Invertase [H]
Number of amino acids: Translated: 485; Mature: 485
Protein sequence:
>485_residues MQDKNVYEEINKDLDRYYKNSNNSKWRNNFHLEMPFGLLNDPNGLSYYNNKFHIFYQWNPFGCEHKNKHWGLVKTSDFIN FTKPEIILKPVDWFDKNGCYSGGAYVKDDTLKLFYTGNVKDENNNRESYQCIANYYKDGTFEKKGPVIFKQPEGYTAHFR DPFIFEEDNIYYMVLGVQTDRLKGRTLLYKSIDIEKWEFIGELKTDLDDFGYMWECPNLVKVSDNKFAFLFSPQGLEAEE LRNQNIYQSGHIIGDLDLNDVSLNNHSDFKELDMGFDFYAPQVFKHDNQNIMLGWIGMPDKDSEYLSSKEGWMFSLTMPR ALEYKNNVIYQKPLKQLEALRDKKEIEISNDEFDLYKMKLNSRNKEVKLNLDIKESENIEIVFNFGDENIRLNYNKKSEV CTIDRNNMELGGKGIRKFKLKAEDNLDLHIFIDNSVMEIYYQDGLEVTTFMYFPKEECLDIEIKDNSKVKINELNVWNLR SVRYE
Sequences:
>Translated_485_residues MQDKNVYEEINKDLDRYYKNSNNSKWRNNFHLEMPFGLLNDPNGLSYYNNKFHIFYQWNPFGCEHKNKHWGLVKTSDFIN FTKPEIILKPVDWFDKNGCYSGGAYVKDDTLKLFYTGNVKDENNNRESYQCIANYYKDGTFEKKGPVIFKQPEGYTAHFR DPFIFEEDNIYYMVLGVQTDRLKGRTLLYKSIDIEKWEFIGELKTDLDDFGYMWECPNLVKVSDNKFAFLFSPQGLEAEE LRNQNIYQSGHIIGDLDLNDVSLNNHSDFKELDMGFDFYAPQVFKHDNQNIMLGWIGMPDKDSEYLSSKEGWMFSLTMPR ALEYKNNVIYQKPLKQLEALRDKKEIEISNDEFDLYKMKLNSRNKEVKLNLDIKESENIEIVFNFGDENIRLNYNKKSEV CTIDRNNMELGGKGIRKFKLKAEDNLDLHIFIDNSVMEIYYQDGLEVTTFMYFPKEECLDIEIKDNSKVKINELNVWNLR SVRYE >Mature_485_residues MQDKNVYEEINKDLDRYYKNSNNSKWRNNFHLEMPFGLLNDPNGLSYYNNKFHIFYQWNPFGCEHKNKHWGLVKTSDFIN FTKPEIILKPVDWFDKNGCYSGGAYVKDDTLKLFYTGNVKDENNNRESYQCIANYYKDGTFEKKGPVIFKQPEGYTAHFR DPFIFEEDNIYYMVLGVQTDRLKGRTLLYKSIDIEKWEFIGELKTDLDDFGYMWECPNLVKVSDNKFAFLFSPQGLEAEE LRNQNIYQSGHIIGDLDLNDVSLNNHSDFKELDMGFDFYAPQVFKHDNQNIMLGWIGMPDKDSEYLSSKEGWMFSLTMPR ALEYKNNVIYQKPLKQLEALRDKKEIEISNDEFDLYKMKLNSRNKEVKLNLDIKESENIEIVFNFGDENIRLNYNKKSEV CTIDRNNMELGGKGIRKFKLKAEDNLDLHIFIDNSVMEIYYQDGLEVTTFMYFPKEECLDIEIKDNSKVKINELNVWNLR SVRYE
Specific function: Unknown
COG id: COG1621
COG function: function code G; Beta-fructosidases (levanase/invertase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 32 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322029, Length=484, Percent_Identity=21.900826446281, Blast_Score=68, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008985 - InterPro: IPR001362 - InterPro: IPR018053 - InterPro: IPR013189 - InterPro: IPR013148 - InterPro: IPR006232 [H]
Pfam domain/function: PF08244 Glyco_hydro_32C; PF00251 Glyco_hydro_32N [H]
EC number: =3.2.1.26 [H]
Molecular weight: Translated: 57556; Mature: 57556
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDKNVYEEINKDLDRYYKNSNNSKWRNNFHLEMPFGLLNDPNGLSYYNNKFHIFYQWNP CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCEECCEEEEEEEECC FGCEHKNKHWGLVKTSDFINFTKPEIILKPVDWFDKNGCYSGGAYVKDDTLKLFYTGNVK CCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCEEEEEECCCC DENNNRESYQCIANYYKDGTFEKKGPVIFKQPEGYTAHFRDPFIFEEDNIYYMVLGVQTD CCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEECCCCEEEECCCEEEEEEEEEEC RLKGRTLLYKSIDIEKWEFIGELKTDLDDFGYMWECPNLVKVSDNKFAFLFSPQGLEAEE CCCCCEEEEEECCCHHHHHHHHHHCCHHHCCCEECCCCEEEECCCCEEEEECCCCCCHHH LRNQNIYQSGHIIGDLDLNDVSLNNHSDFKELDMGFDFYAPQVFKHDNQNIMLGWIGMPD HCCCCCEECCCEEEECCCCEEECCCCCCHHHHCCCCCCCCCHHEECCCCEEEEEEECCCC KDSEYLSSKEGWMFSLTMPRALEYKNNVIYQKPLKQLEALRDKKEIEISNDEFDLYKMKL CCHHHHCCCCCEEEEEECCCHHHHCCCEEEHHHHHHHHHHCCCCEEEECCCCEEEEEEEE NSRNKEVKLNLDIKESENIEIVFNFGDENIRLNYNKKSEVCTIDRNNMELGGKGIRKFKL CCCCCEEEEEEEECCCCCEEEEEEECCCEEEEEECCCCCEEEEECCCCEECCCCEEEEEE KAEDNLDLHIFIDNSVMEIYYQDGLEVTTFMYFPKEECLDIEIKDNSKVKINELNVWNLR ECCCCCEEEEEECCCEEEEEEECCCEEEEEEEECCCCCEEEEECCCCEEEEEEECEEEEE SVRYE EEECC >Mature Secondary Structure MQDKNVYEEINKDLDRYYKNSNNSKWRNNFHLEMPFGLLNDPNGLSYYNNKFHIFYQWNP CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCEECCEEEEEEEECC FGCEHKNKHWGLVKTSDFINFTKPEIILKPVDWFDKNGCYSGGAYVKDDTLKLFYTGNVK CCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCEEEEEECCCC DENNNRESYQCIANYYKDGTFEKKGPVIFKQPEGYTAHFRDPFIFEEDNIYYMVLGVQTD CCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEECCCCEEEECCCEEEEEEEEEEC RLKGRTLLYKSIDIEKWEFIGELKTDLDDFGYMWECPNLVKVSDNKFAFLFSPQGLEAEE CCCCCEEEEEECCCHHHHHHHHHHCCHHHCCCEECCCCEEEECCCCEEEEECCCCCCHHH LRNQNIYQSGHIIGDLDLNDVSLNNHSDFKELDMGFDFYAPQVFKHDNQNIMLGWIGMPD HCCCCCEECCCEEEECCCCEEECCCCCCHHHHCCCCCCCCCHHEECCCCEEEEEEECCCC KDSEYLSSKEGWMFSLTMPRALEYKNNVIYQKPLKQLEALRDKKEIEISNDEFDLYKMKL CCHHHHCCCCCEEEEEECCCHHHHCCCEEEHHHHHHHHHHCCCCEEEECCCCEEEEEEEE NSRNKEVKLNLDIKESENIEIVFNFGDENIRLNYNKKSEVCTIDRNNMELGGKGIRKFKL CCCCCEEEEEEEECCCCCEEEEEEECCCEEEEEECCCCCEEEEECCCCEECCCCEEEEEE KAEDNLDLHIFIDNSVMEIYYQDGLEVTTFMYFPKEECLDIEIKDNSKVKINELNVWNLR ECCCCCEEEEEECCCEEEEEEECCCEEEEEEEECCCCCEEEEECCCCEEEEEEECEEEEE SVRYE EEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3100393; 7934828; 9384377; 3122206 [H]