| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is crp [C]
Identifier: 187933353
GI number: 187933353
Start: 3143113
End: 3143805
Strand: Reverse
Name: crp [C]
Synonym: CLL_A3043
Alternate gene names: 187933353
Gene position: 3143805-3143113 (Counterclockwise)
Preceding gene: 187935080
Following gene: 187934292
Centisome position: 82.72
GC content: 25.97
Gene sequence:
>693_bases ATGAATAATGTTACCATGCAGGAACTTAGGAATTTAGAAATCTTTAAAAATATATGTGATGATTCTTTGAACAAAATTAT TGAAATGGGAATTTTAATTAAGTACCCTTCAGGTAGGCATATTTTTAGAGACAAAGAAGATGTGAAAATTTTATATGTAA TATTAAGTGGTACAGTATCATTGTATAAATTAAATGAATGTGGGCATAAAAGAGCTATCTTTATTTTAGGTAAAGGAAAA ATGATTAATGATGTTATAATACAGGATTTGCCATCATCCATTAATTGCGAGGTTTTTGAAGATGCAGAAATTTTAAGTTT TGATAAAGAAGATTTTATGAAAATTATGGAGTTAGATTTTATATTAACAAAAAATGTAATGTGCTCATTATCGATGAAAG TAAGAAGATTGTATAGGCAGATTAAAAATTCAACAGGTGTTATAAAAATGGAAAAACGATTATGTGCAAAGCTGTGGAAA TTAAGCAAGGATTATGGAAGTGAAAAAAATGGTGAAGTAGTAGTTGATAAAAAGATAACTATTACCTATTTAGCAGACTT ATTAGGTTCAAAAAGAGAAACAATATCCAGAGCATTAAAAGTATTATGTAATGAAAATTTAATTGAATATAAAAATAAGC AGATAATAGTAAAAAATCAGAAAAAACTATCTGAATTTTTTAAAGCACCGTGA
Upstream 100 bases:
>100_bases ATTTAAGAGATACAGGTAAGATTCTTGCCGAAACTTAAAAGTTAGCTTTAAGCTAAAGTATATATGAAATATTATTTAGA AGATATATTTTGGAGGAATT
Downstream 100 bases:
>100_bases TTAATATCACGGTGCTTTAATTATTTAAAATATATACTTAGATTAATAGAAATTATAATTTAAAATTGAAATTATGAAGG GAGACTTAATACGATGTTTT
Product: transcriptional regulator, Crp/Fnr family
Products: NA
Alternate protein names: Crp/FNR Family Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Transcription Regulator; Transcriptional Regulator; Crp Family Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator; Cyclic AMP Receptor Protein; CRP Family Transcriptional Regulator; Catabolite Gene Activator; FNR-Like Catabolite Gene Activator Protein
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MNNVTMQELRNLEIFKNICDDSLNKIIEMGILIKYPSGRHIFRDKEDVKILYVILSGTVSLYKLNECGHKRAIFILGKGK MINDVIIQDLPSSINCEVFEDAEILSFDKEDFMKIMELDFILTKNVMCSLSMKVRRLYRQIKNSTGVIKMEKRLCAKLWK LSKDYGSEKNGEVVVDKKITITYLADLLGSKRETISRALKVLCNENLIEYKNKQIIVKNQKKLSEFFKAP
Sequences:
>Translated_230_residues MNNVTMQELRNLEIFKNICDDSLNKIIEMGILIKYPSGRHIFRDKEDVKILYVILSGTVSLYKLNECGHKRAIFILGKGK MINDVIIQDLPSSINCEVFEDAEILSFDKEDFMKIMELDFILTKNVMCSLSMKVRRLYRQIKNSTGVIKMEKRLCAKLWK LSKDYGSEKNGEVVVDKKITITYLADLLGSKRETISRALKVLCNENLIEYKNKQIIVKNQKKLSEFFKAP >Mature_230_residues MNNVTMQELRNLEIFKNICDDSLNKIIEMGILIKYPSGRHIFRDKEDVKILYVILSGTVSLYKLNECGHKRAIFILGKGK MINDVIIQDLPSSINCEVFEDAEILSFDKEDFMKIMELDFILTKNVMCSLSMKVRRLYRQIKNSTGVIKMEKRLCAKLWK LSKDYGSEKNGEVVVDKKITITYLADLLGSKRETISRALKVLCNENLIEYKNKQIIVKNQKKLSEFFKAP
Specific function: This Protein Complexes With Cyclic AMP And Binds To Specific DNA Sites Near The Promoter To Regulate The Transcription Of Several Catabolite-Sensitive Operons. The Protein Induces A Severe Bend In The DNA. Acts As A Negative Regulator Of Its Own Synthesi
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26657; Mature: 26657
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNVTMQELRNLEIFKNICDDSLNKIIEMGILIKYPSGRHIFRDKEDVKILYVILSGTVS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCEEEEEEEECCEE LYKLNECGHKRAIFILGKGKMINDVIIQDLPSSINCEVFEDAEILSFDKEDFMKIMELDF EEEECCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCEEECCCHHHCCCHHHHHHHHHHHH ILTKNVMCSLSMKVRRLYRQIKNSTGVIKMEKRLCAKLWKLSKDYGSEKNGEVVVDKKIT HHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCEEEECCHH ITYLADLLGSKRETISRALKVLCNENLIEYKNKQIIVKNQKKLSEFFKAP HHHHHHHHCCHHHHHHHHHHHHHCCCHHHHCCCEEEEECHHHHHHHHCCC >Mature Secondary Structure MNNVTMQELRNLEIFKNICDDSLNKIIEMGILIKYPSGRHIFRDKEDVKILYVILSGTVS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCEEEEEEEECCEE LYKLNECGHKRAIFILGKGKMINDVIIQDLPSSINCEVFEDAEILSFDKEDFMKIMELDF EEEECCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCEEECCCHHHCCCHHHHHHHHHHHH ILTKNVMCSLSMKVRRLYRQIKNSTGVIKMEKRLCAKLWKLSKDYGSEKNGEVVVDKKIT HHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCEEEECCHH ITYLADLLGSKRETISRALKVLCNENLIEYKNKQIIVKNQKKLSEFFKAP HHHHHHHHCCHHHHHHHHHHHHHCCCHHHHCCCEEEEECHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA