Definition Clostridium botulinum B str. Eklund 17B, complete genome.
Accession NC_010674
Length 3,800,327

Click here to switch to the map view.

The map label for this gene is yvgK [H]

Identifier: 187935080

GI number: 187935080

Start: 3143868

End: 3144821

Strand: Reverse

Name: yvgK [H]

Synonym: CLL_A3044

Alternate gene names: 187935080

Gene position: 3144821-3143868 (Counterclockwise)

Preceding gene: 187932828

Following gene: 187933353

Centisome position: 82.75

GC content: 27.25

Gene sequence:

>954_bases
GTGGACTCAGAAAGATCATTGACTGCACTTGAAGTATCAGAATTATTAAAAATAAATAAAAATACAGTTTATGAACTTGT
AAAGAGAGGCGAATTACCTGGATATAAGATAGGAAAAAAATTAAGGATAGATGAAAAAGATGTTTTTGAATATATAAATA
ATCAAAAATCTTCTTCAAAAAATAGTAAAAATATCACGAAAAGTTATTTGAAGAATGATGTAAATATAAATTCTGAATTT
AAAATAGAAAATGATATCATAATTTCAGGACAAGATATTATTTTAGATGTTTTAGCTCGTCATATTGAAGAAAAAACTGA
TAATATTAGAGTTTTACGTTCAAATGTTGGCAGTTATACAAGCTTGTATGATTTATATAATGATAAGATATCAATATCAT
CATCACATCTTTGGGATGGTGATACAAATGAATATAATACAGCTTATGTAAGACGATTAATTCCAGGTATTCCATGTATA
CTAATTAATTTAGCATATAGAAGACAAGGATTTTATGTAGCTAAAGGAAATCCACATAACATAACAACATGGGATGATTT
AATAAAAAGCGATATAAGTATAGTGAATAGAGAAAAGGGATCAGGTACTAGAGTATTGTTAGATGAGAAATTAAGATTAT
ATAATGTTGAAGGCGAGTCTATTAAAGGTTATAACTTCGAACAATCATCTCATTTAGCAGTAGCAAGCAGTATAGCTGTG
GGTGATGGAGACTTAGGAATAGGAATAGAAAAGGTTGCTCATCAAGTAAGTGAAATTGATTTTGTACCTATACAAGAAGA
ACGATATGATTTGATTATAAAAAAATCATTTTTAAAATATCCACTTTATAAGTTAATAATTGAAATAATTCAATCTAAAG
AATTCAAAAAGGAAATCAAAGGGTTGGGTGAATATGATTTAAGAGATACAGGTAAGATTCTTGCCGAAACTTAA

Upstream 100 bases:

>100_bases
TTCTTAATGATAGAATTAATAAGAAGTGAAATCTTCATTAGAAAGATAAATAGTTTTTTATGAAATGTTATAGCTAGATT
ATACAAGGGGGGGATTAATT

Downstream 100 bases:

>100_bases
AAGTTAGCTTTAAGCTAAAGTATATATGAAATATTATTTAGAAGATATATTTTGGAGGAATTATGAATAATGTTACCATG
CAGGAACTTAGGAATTTAGA

Product: periplasmic molybdate-binding protein/domain

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MDSERSLTALEVSELLKINKNTVYELVKRGELPGYKIGKKLRIDEKDVFEYINNQKSSSKNSKNITKSYLKNDVNINSEF
KIENDIIISGQDIILDVLARHIEEKTDNIRVLRSNVGSYTSLYDLYNDKISISSSHLWDGDTNEYNTAYVRRLIPGIPCI
LINLAYRRQGFYVAKGNPHNITTWDDLIKSDISIVNREKGSGTRVLLDEKLRLYNVEGESIKGYNFEQSSHLAVASSIAV
GDGDLGIGIEKVAHQVSEIDFVPIQEERYDLIIKKSFLKYPLYKLIIEIIQSKEFKKEIKGLGEYDLRDTGKILAET

Sequences:

>Translated_317_residues
MDSERSLTALEVSELLKINKNTVYELVKRGELPGYKIGKKLRIDEKDVFEYINNQKSSSKNSKNITKSYLKNDVNINSEF
KIENDIIISGQDIILDVLARHIEEKTDNIRVLRSNVGSYTSLYDLYNDKISISSSHLWDGDTNEYNTAYVRRLIPGIPCI
LINLAYRRQGFYVAKGNPHNITTWDDLIKSDISIVNREKGSGTRVLLDEKLRLYNVEGESIKGYNFEQSSHLAVASSIAV
GDGDLGIGIEKVAHQVSEIDFVPIQEERYDLIIKKSFLKYPLYKLIIEIIQSKEFKKEIKGLGEYDLRDTGKILAET
>Mature_317_residues
MDSERSLTALEVSELLKINKNTVYELVKRGELPGYKIGKKLRIDEKDVFEYINNQKSSSKNSKNITKSYLKNDVNINSEF
KIENDIIISGQDIILDVLARHIEEKTDNIRVLRSNVGSYTSLYDLYNDKISISSSHLWDGDTNEYNTAYVRRLIPGIPCI
LINLAYRRQGFYVAKGNPHNITTWDDLIKSDISIVNREKGSGTRVLLDEKLRLYNVEGESIKGYNFEQSSHLAVASSIAV
GDGDLGIGIEKVAHQVSEIDFVPIQEERYDLIIKKSFLKYPLYKLIIEIIQSKEFKKEIKGLGEYDLRDTGKILAET

Specific function: Unknown

COG id: COG1910

COG function: function code P; Periplasmic molybdate-binding protein/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR010093 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36164; Mature: 36164

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSERSLTALEVSELLKINKNTVYELVKRGELPGYKIGKKLRIDEKDVFEYINNQKSSSK
CCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHCCCCCCCC
NSKNITKSYLKNDVNINSEFKIENDIIISGQDIILDVLARHIEEKTDNIRVLRSNVGSYT
CHHHHHHHHHHCCCCCCCEEEECCCEEECCHHHHHHHHHHHHHHCCCCCEEEHHCCCCHH
SLYDLYNDKISISSSHLWDGDTNEYNTAYVRRLIPGIPCILINLAYRRQGFYVAKGNPHN
HHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHCCEEEECCCCCC
ITTWDDLIKSDISIVNREKGSGTRVLLDEKLRLYNVEGESIKGYNFEQSSHLAVASSIAV
CCHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCEEEEEEEEE
GDGDLGIGIEKVAHQVSEIDFVPIQEERYDLIIKKSFLKYPLYKLIIEIIQSKEFKKEIK
CCCCCCCCHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLGEYDLRDTGKILAET
CCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MDSERSLTALEVSELLKINKNTVYELVKRGELPGYKIGKKLRIDEKDVFEYINNQKSSSK
CCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHCCCCCCCC
NSKNITKSYLKNDVNINSEFKIENDIIISGQDIILDVLARHIEEKTDNIRVLRSNVGSYT
CHHHHHHHHHHCCCCCCCEEEECCCEEECCHHHHHHHHHHHHHHCCCCCEEEHHCCCCHH
SLYDLYNDKISISSSHLWDGDTNEYNTAYVRRLIPGIPCILINLAYRRQGFYVAKGNPHN
HHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHCCEEEECCCCCC
ITTWDDLIKSDISIVNREKGSGTRVLLDEKLRLYNVEGESIKGYNFEQSSHLAVASSIAV
CCHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCEEEEEEEEE
GDGDLGIGIEKVAHQVSEIDFVPIQEERYDLIIKKSFLKYPLYKLIIEIIQSKEFKKEIK
CCCCCCCCHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLGEYDLRDTGKILAET
CCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]