| Definition | Borrelia hermsii DAH chromosome, complete genome. |
|---|---|
| Accession | NC_010673 |
| Length | 922,307 |
Click here to switch to the map view.
The map label for this gene is 187918599
Identifier: 187918599
GI number: 187918599
Start: 795376
End: 797079
Strand: Direct
Name: 187918599
Synonym: BH0743
Alternate gene names: NA
Gene position: 795376-797079 (Clockwise)
Preceding gene: 187918598
Following gene: 187918600
Centisome position: 86.24
GC content: 29.64
Gene sequence:
>1704_bases ATGTTTAACCATTACAGGATGTTTGTGGTTTTGAAGGTAAATGTTTGTATTTTTATATTTTTAGGTGCTTGTTTTTCCCT TTCAGCAGATGTTAATCTTTATTTCCAGAAAGCTTTAACAGGGCAGGTTTTAGGAAATCCTATTCTTGATGAGAGACGTA ATACTATTACGGTGTTAACAAAGGATAGGTGGTTGGTAACTTATACTGTGTCTTTAAATAAAAAGTATTCTTATAGGCTA GATCGAACCCCATATCCCTTCCTTTTAAAGGATTTTGGTAGTGGATATTATGTTATTACAGGACGTAATGAAGTACAAAA GATTAGAAGAGGAAAGCTTATATGGAGGTATAATTTAGGTGTCCCGCCTATAAAAGCTCCTTCAATAGGGAATGGTTATA TTTTAATTCCTCAGGCTGATGGAAAAGTTATTGCTTTAAGACTTGGTGATGGTCAAAAGGTTTTTGAGGCAAATATAGAA GGGAAGGCAGCAACTTCTTCTGTTGTTCTTGAGAATGGCAATTTTTATATTGCAAATGAAAATTATAAAATGTTTGCTTT TAATTCTGAGGGAGAGCAAATATGGAGCACTGAGCTTATGTCTTTTCCCAATGCATTAATGATAAGTACTAATAATGAAA TAGTGGTTGGATGTCAATCTGGAGATGTTGTTGTGTATGATAGTGATTTTGGCGATATGTTAGGTTCTATTAGTTTAAAC TATCCTATTAATTTTTTATTTGAGAAGTTTAATGGGGAATATATTGCAGTCTCTGATATTGGGATTTTTTTTAATTTAAG TAGGAACTTTGATCTCATGTTTTCTGAGAATTTACCTTTAAAACTTAAGGAAGCCGTGCTTTATGATAATAAAAATCTTT TTATTGTTATGGAGTCAAATGGTGTTTTAGCTCTTGATGAATATTTCAAACCAGTTGATAGGTATGATGATATTAAGGAA ATATCGGGTCTTGTATCTAATGTTGGAATGATTGCTACTGGTGGATTTAATTGGATACTAACTACTTATTATTATGAATA TAAAGATGAGCTTGATTTTATTGTTTGGAATCATACATTAGGTAATAGATATCATCAAAATAGGATAGATTTTAGAGAAA AATCTTTAGTAGATCATGAGGATATTTATTTGGCTCTTGATGAAATGTTGAATTCTACATACAATAGAAAGGTTTATAAT AAGTTTTTAAGTGTTCTAGATTCTTTGGTAATGAAATATGGTAGTTTCCCTAAAAAATATTTGAATTTATATAGAAAAGC TATTAATAATTGGCTTGCTCCAAAAAATGGAGTTGATAGAATAGCTCAAAGGGGGCAGCTTTATAAATATTTTATGTATG TTGATGATGCAGCCTCGGTTAAGAGTTTTATCAATATGGCAATTGAAGAAAAGGATATTAATAATGTAATTCAATTAGTT AACAGTATTGCTGGATTTGAATATTATTATGGGCAAGATGAGCTTGTATATAATTATATTCAGTATGTAATATTAAATTA TCAGGGTAATTTAGAGATAGCATATGCTGTTCTTTTAAGCTTGCGCAAGATAATTTTGAATTCTACAGAGGATAATCTTA AGAGATATAGAAGTAAATATTTAACTCTTTTGAAATTTGTAAGACGTCAAAATTTTTCTGAAAAAATTAATCAATGTATT AATGAAATTATTGTATCTCTTTGA
Upstream 100 bases:
>100_bases GATCGTTTTATGACTTTTTCAGAGTATATTGATGATTCTAAAGTCAAAGAATTAAGAGATAAGCTTTATGAAGGACATAC CAGCTTGAAACTTTGATTAT
Downstream 100 bases:
>100_bases TTTATTTTGTTGCTAATTTTATGTTATTATTTATTGAATACATCTTATAGTAAGTTAAGATTGATGTTTAATTTATGCCG ATTTAGTTAATAATAAGGTT
Product: hypothetical membrane spanning protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 567; Mature: 567
Protein sequence:
>567_residues MFNHYRMFVVLKVNVCIFIFLGACFSLSADVNLYFQKALTGQVLGNPILDERRNTITVLTKDRWLVTYTVSLNKKYSYRL DRTPYPFLLKDFGSGYYVITGRNEVQKIRRGKLIWRYNLGVPPIKAPSIGNGYILIPQADGKVIALRLGDGQKVFEANIE GKAATSSVVLENGNFYIANENYKMFAFNSEGEQIWSTELMSFPNALMISTNNEIVVGCQSGDVVVYDSDFGDMLGSISLN YPINFLFEKFNGEYIAVSDIGIFFNLSRNFDLMFSENLPLKLKEAVLYDNKNLFIVMESNGVLALDEYFKPVDRYDDIKE ISGLVSNVGMIATGGFNWILTTYYYEYKDELDFIVWNHTLGNRYHQNRIDFREKSLVDHEDIYLALDEMLNSTYNRKVYN KFLSVLDSLVMKYGSFPKKYLNLYRKAINNWLAPKNGVDRIAQRGQLYKYFMYVDDAASVKSFINMAIEEKDINNVIQLV NSIAGFEYYYGQDELVYNYIQYVILNYQGNLEIAYAVLLSLRKIILNSTEDNLKRYRSKYLTLLKFVRRQNFSEKINQCI NEIIVSL
Sequences:
>Translated_567_residues MFNHYRMFVVLKVNVCIFIFLGACFSLSADVNLYFQKALTGQVLGNPILDERRNTITVLTKDRWLVTYTVSLNKKYSYRL DRTPYPFLLKDFGSGYYVITGRNEVQKIRRGKLIWRYNLGVPPIKAPSIGNGYILIPQADGKVIALRLGDGQKVFEANIE GKAATSSVVLENGNFYIANENYKMFAFNSEGEQIWSTELMSFPNALMISTNNEIVVGCQSGDVVVYDSDFGDMLGSISLN YPINFLFEKFNGEYIAVSDIGIFFNLSRNFDLMFSENLPLKLKEAVLYDNKNLFIVMESNGVLALDEYFKPVDRYDDIKE ISGLVSNVGMIATGGFNWILTTYYYEYKDELDFIVWNHTLGNRYHQNRIDFREKSLVDHEDIYLALDEMLNSTYNRKVYN KFLSVLDSLVMKYGSFPKKYLNLYRKAINNWLAPKNGVDRIAQRGQLYKYFMYVDDAASVKSFINMAIEEKDINNVIQLV NSIAGFEYYYGQDELVYNYIQYVILNYQGNLEIAYAVLLSLRKIILNSTEDNLKRYRSKYLTLLKFVRRQNFSEKINQCI NEIIVSL >Mature_567_residues MFNHYRMFVVLKVNVCIFIFLGACFSLSADVNLYFQKALTGQVLGNPILDERRNTITVLTKDRWLVTYTVSLNKKYSYRL DRTPYPFLLKDFGSGYYVITGRNEVQKIRRGKLIWRYNLGVPPIKAPSIGNGYILIPQADGKVIALRLGDGQKVFEANIE GKAATSSVVLENGNFYIANENYKMFAFNSEGEQIWSTELMSFPNALMISTNNEIVVGCQSGDVVVYDSDFGDMLGSISLN YPINFLFEKFNGEYIAVSDIGIFFNLSRNFDLMFSENLPLKLKEAVLYDNKNLFIVMESNGVLALDEYFKPVDRYDDIKE ISGLVSNVGMIATGGFNWILTTYYYEYKDELDFIVWNHTLGNRYHQNRIDFREKSLVDHEDIYLALDEMLNSTYNRKVYN KFLSVLDSLVMKYGSFPKKYLNLYRKAINNWLAPKNGVDRIAQRGQLYKYFMYVDDAASVKSFINMAIEEKDINNVIQLV NSIAGFEYYYGQDELVYNYIQYVILNYQGNLEIAYAVLLSLRKIILNSTEDNLKRYRSKYLTLLKFVRRQNFSEKINQCI NEIIVSL
Specific function: Unknown
COG id: COG1520
COG function: function code S; FOG: WD40-like repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65631; Mature: 65631
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNHYRMFVVLKVNVCIFIFLGACFSLSADVNLYFQKALTGQVLGNPILDERRNTITVLT CCCCEEEEEEEEHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCCCCCCCCCCEEEEEE KDRWLVTYTVSLNKKYSYRLDRTPYPFLLKDFGSGYYVITGRNEVQKIRRGKLIWRYNLG CCCEEEEEEEEECCCEEEEECCCCCCHHHHHCCCCEEEEECCHHHHHHHCCCEEEEECCC VPPIKAPSIGNGYILIPQADGKVIALRLGDGQKVFEANIEGKAATSSVVLENGNFYIANE CCCCCCCCCCCCEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCEEEEECCCEEEECC NYKMFAFNSEGEQIWSTELMSFPNALMISTNNEIVVGCQSGDVVVYDSDFGDMLGSISLN CEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCEEEEECCCCEEEEECCHHHHHCCEEEC YPINFLFEKFNGEYIAVSDIGIFFNLSRNFDLMFSENLPLKLKEAVLYDNKNLFIVMESN CCCEEEEECCCCCEEEEEEEEEEEEECCCEEEEEECCCCCEEEEEEEECCCCEEEEECCC GVLALDEYFKPVDRYDDIKEISGLVSNVGMIATGGFNWILTTYYYEYKDELDFIVWNHTL CEEEEHHHCCCHHHCCHHHHHHHHHHCCCEEEECCCCEEEEEEEEEECCCEEEEEEECCC GNRYHQNRIDFREKSLVDHEDIYLALDEMLNSTYNRKVYNKFLSVLDSLVMKYGSFPKKY CCCHHCCCCCCHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH LNLYRKAINNWLAPKNGVDRIAQRGQLYKYFMYVDDAASVKSFINMAIEEKDINNVIQLV HHHHHHHHHHCCCCCCCHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH NSIAGFEYYYGQDELVYNYIQYVILNYQGNLEIAYAVLLSLRKIILNSTEDNLKRYRSKY HHHCCCEEEECCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LTLLKFVRRQNFSEKINQCINEIIVSL HHHHHHHHHCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MFNHYRMFVVLKVNVCIFIFLGACFSLSADVNLYFQKALTGQVLGNPILDERRNTITVLT CCCCEEEEEEEEHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCCCCCCCCCCEEEEEE KDRWLVTYTVSLNKKYSYRLDRTPYPFLLKDFGSGYYVITGRNEVQKIRRGKLIWRYNLG CCCEEEEEEEEECCCEEEEECCCCCCHHHHHCCCCEEEEECCHHHHHHHCCCEEEEECCC VPPIKAPSIGNGYILIPQADGKVIALRLGDGQKVFEANIEGKAATSSVVLENGNFYIANE CCCCCCCCCCCCEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCEEEEECCCEEEECC NYKMFAFNSEGEQIWSTELMSFPNALMISTNNEIVVGCQSGDVVVYDSDFGDMLGSISLN CEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCEEEEECCCCEEEEECCHHHHHCCEEEC YPINFLFEKFNGEYIAVSDIGIFFNLSRNFDLMFSENLPLKLKEAVLYDNKNLFIVMESN CCCEEEEECCCCCEEEEEEEEEEEEECCCEEEEEECCCCCEEEEEEEECCCCEEEEECCC GVLALDEYFKPVDRYDDIKEISGLVSNVGMIATGGFNWILTTYYYEYKDELDFIVWNHTL CEEEEHHHCCCHHHCCHHHHHHHHHHCCCEEEECCCCEEEEEEEEEECCCEEEEEEECCC GNRYHQNRIDFREKSLVDHEDIYLALDEMLNSTYNRKVYNKFLSVLDSLVMKYGSFPKKY CCCHHCCCCCCHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH LNLYRKAINNWLAPKNGVDRIAQRGQLYKYFMYVDDAASVKSFINMAIEEKDINNVIQLV HHHHHHHHHHCCCCCCCHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH NSIAGFEYYYGQDELVYNYIQYVILNYQGNLEIAYAVLLSLRKIILNSTEDNLKRYRSKY HHHCCCEEEECCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LTLLKFVRRQNFSEKINQCINEIIVSL HHHHHHHHHCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA