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The map label for this gene is ykpA [H]

Identifier: 187918598

GI number: 187918598

Start: 793740

End: 795371

Strand: Direct

Name: ykpA [H]

Synonym: BH0742

Alternate gene names: 187918598

Gene position: 793740-795371 (Clockwise)

Preceding gene: 187918595

Following gene: 187918599

Centisome position: 86.06

GC content: 33.33

Gene sequence:

>1632_bases
TTGATAGCAGTAAGTAATTTAGAAGTTGCATTTGGGGAGAGAGTTTTATTTAAAGATGTTAATGTTAAATTTTCTTCTGG
AAATTGTTATGGGATAATTGGGGCTAATGGTGCAGGGAAGAGTACATTTTTGAAAGTTTTAGGCGGAACGATTGAACCTA
GCAAGGGTGAGGTCGCAGTTGCGAAGAATCAAAGAATGGCTGTGCTTGAGCAAAATCAATTTGCTTATGATGATTTCAGG
GTTATTGATACTGTGATCATGGGCCACAAAAAGCTTTATGCTGTGCAAAGGGAAAAAGATTTAATTTATGAAAAACCTGA
TTTTAGTGATGAGGATGGAATTAGGGCTGGAGAACTTGAGGCTGAGTTTGCAGAACTTGGAGGTTATGAGGCTGAGTCTA
ATGCCGCAGTCCTTCTTAAAGGGCTTGGTATAGAAGAGTCGGTTCATTCTAGTTTGATGAGAGATATTGATGCGGCTTTA
AAAGTAAGGGTACTCTTAGCACAAGCTCTTTTTGGAGAGCCTGATATATTACTTCTTGATGAGCCTACTAATAATCTTGA
TATTCAATCGATTAAGTGGCTGGAAGAATTTTTAATTAATTTTGAAAATACAGTTATTGTTGTGTCACATGATAGACACT
TTTTAAATCAAGTTTGTACTCATATTGTTGATATTGATTATGGAAAAATTCAAGTTTATCTTGGTAACTATGATTTTTGG
TATGAAACTAGTCAAATTCTTAATAAACAACTCAAAGATGCCAAGAAAAGATCTGAAGAGAAAATAGCGGAACTTAAAAC
TTTTATTCAAAGATTTTCAAGTAATGCATCGAAATCTAGACAAGCGACTTCAAGAAAGAAATTAATTGATAAGATTAGAA
TTGAAGATCTAAAACCGTCTTCAAGGAAGTTTCCTTATGTTAACTTTAAGAGTGAAAGAGACCTTGGGAAAAATGTTATT
ACAATTAAAAATCTGAGCAAGGAATTTGAAGGACAACATATTTTAAATAAGTTTAGCATTGTAATAGAACCTGGGCAAAA
GGTTGTCTTTTTAGGCAGTCCAATCTCAGCAAGTTCTCTTTTTGATGTAATTACCAATGAAGATAGAGATTATAAGGGTC
ATTATGAATGGGGTGCTACTGTTAATTTTGCGTACTTTAAGAAGGATAATGAGCAATATTTTAGTGTGGATTTAAGTTTG
GTAGATTGGTTAAGGCAGTATTCAAAAGAGCAGGATGAAACTTATATTAGGGGATTTTTGGGACGAATGCTTTTTAGTCA
AGATGAAGCTTTAAAAAAAGTTAATGTCCTATCAGGGGGTGAAAAGGTAAGATGTATGCTTTCAAAGATAATGCTTAGTG
GGGCTAATGTATTATTATTAGATCAACCAACTAATCATTTAGATCTTGAGGCGATTACATCTTTAAATACCGGTCTTCAA
GATTTTAAAGGAGTTGTGTTATTCACATCTCATGACCATCAATTTATTGATACGATTGCTAATCGGATTATTGAGTTTAC
ACCTAATGGAATAATTGATCGTTTTATGACTTTTTCAGAGTATATTGATGATTCTAAAGTCAAAGAATTAAGAGATAAGC
TTTATGAAGGACATACCAGCTTGAAACTTTGA

Upstream 100 bases:

>100_bases
TGAAGTATTAAGTCAATATATTTAGATAATACTTGAAACTTCATTTAATTTTAAAGATAATTCTTTTAATAATAATATCA
AGTTTAGGTGGAAAAGTAGT

Downstream 100 bases:

>100_bases
TTATATGTTTAACCATTACAGGATGTTTGTGGTTTTGAAGGTAAATGTTTGTATTTTTATATTTTTAGGTGCTTGTTTTT
CCCTTTCAGCAGATGTTAAT

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 543; Mature: 543

Protein sequence:

>543_residues
MIAVSNLEVAFGERVLFKDVNVKFSSGNCYGIIGANGAGKSTFLKVLGGTIEPSKGEVAVAKNQRMAVLEQNQFAYDDFR
VIDTVIMGHKKLYAVQREKDLIYEKPDFSDEDGIRAGELEAEFAELGGYEAESNAAVLLKGLGIEESVHSSLMRDIDAAL
KVRVLLAQALFGEPDILLLDEPTNNLDIQSIKWLEEFLINFENTVIVVSHDRHFLNQVCTHIVDIDYGKIQVYLGNYDFW
YETSQILNKQLKDAKKRSEEKIAELKTFIQRFSSNASKSRQATSRKKLIDKIRIEDLKPSSRKFPYVNFKSERDLGKNVI
TIKNLSKEFEGQHILNKFSIVIEPGQKVVFLGSPISASSLFDVITNEDRDYKGHYEWGATVNFAYFKKDNEQYFSVDLSL
VDWLRQYSKEQDETYIRGFLGRMLFSQDEALKKVNVLSGGEKVRCMLSKIMLSGANVLLLDQPTNHLDLEAITSLNTGLQ
DFKGVVLFTSHDHQFIDTIANRIIEFTPNGIIDRFMTFSEYIDDSKVKELRDKLYEGHTSLKL

Sequences:

>Translated_543_residues
MIAVSNLEVAFGERVLFKDVNVKFSSGNCYGIIGANGAGKSTFLKVLGGTIEPSKGEVAVAKNQRMAVLEQNQFAYDDFR
VIDTVIMGHKKLYAVQREKDLIYEKPDFSDEDGIRAGELEAEFAELGGYEAESNAAVLLKGLGIEESVHSSLMRDIDAAL
KVRVLLAQALFGEPDILLLDEPTNNLDIQSIKWLEEFLINFENTVIVVSHDRHFLNQVCTHIVDIDYGKIQVYLGNYDFW
YETSQILNKQLKDAKKRSEEKIAELKTFIQRFSSNASKSRQATSRKKLIDKIRIEDLKPSSRKFPYVNFKSERDLGKNVI
TIKNLSKEFEGQHILNKFSIVIEPGQKVVFLGSPISASSLFDVITNEDRDYKGHYEWGATVNFAYFKKDNEQYFSVDLSL
VDWLRQYSKEQDETYIRGFLGRMLFSQDEALKKVNVLSGGEKVRCMLSKIMLSGANVLLLDQPTNHLDLEAITSLNTGLQ
DFKGVVLFTSHDHQFIDTIANRIIEFTPNGIIDRFMTFSEYIDDSKVKELRDKLYEGHTSLKL
>Mature_543_residues
MIAVSNLEVAFGERVLFKDVNVKFSSGNCYGIIGANGAGKSTFLKVLGGTIEPSKGEVAVAKNQRMAVLEQNQFAYDDFR
VIDTVIMGHKKLYAVQREKDLIYEKPDFSDEDGIRAGELEAEFAELGGYEAESNAAVLLKGLGIEESVHSSLMRDIDAAL
KVRVLLAQALFGEPDILLLDEPTNNLDIQSIKWLEEFLINFENTVIVVSHDRHFLNQVCTHIVDIDYGKIQVYLGNYDFW
YETSQILNKQLKDAKKRSEEKIAELKTFIQRFSSNASKSRQATSRKKLIDKIRIEDLKPSSRKFPYVNFKSERDLGKNVI
TIKNLSKEFEGQHILNKFSIVIEPGQKVVFLGSPISASSLFDVITNEDRDYKGHYEWGATVNFAYFKKDNEQYFSVDLSL
VDWLRQYSKEQDETYIRGFLGRMLFSQDEALKKVNVLSGGEKVRCMLSKIMLSGANVLLLDQPTNHLDLEAITSLNTGLQ
DFKGVVLFTSHDHQFIDTIANRIIEFTPNGIIDRFMTFSEYIDDSKVKELRDKLYEGHTSLKL

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=538, Percent_Identity=28.8104089219331, Blast_Score=233, Evalue=4e-61,
Organism=Homo sapiens, GI27881506, Length=510, Percent_Identity=29.2156862745098, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI10947137, Length=510, Percent_Identity=29.2156862745098, Blast_Score=209, Evalue=5e-54,
Organism=Homo sapiens, GI69354671, Length=509, Percent_Identity=26.3261296660118, Blast_Score=156, Evalue=4e-38,
Organism=Homo sapiens, GI10947135, Length=509, Percent_Identity=26.3261296660118, Blast_Score=156, Evalue=4e-38,
Organism=Homo sapiens, GI105990541, Length=218, Percent_Identity=26.1467889908257, Blast_Score=70, Evalue=8e-12,
Organism=Escherichia coli, GI1787041, Length=526, Percent_Identity=45.6273764258555, Blast_Score=512, Evalue=1e-146,
Organism=Escherichia coli, GI1789751, Length=503, Percent_Identity=28.6282306163022, Blast_Score=235, Evalue=7e-63,
Organism=Escherichia coli, GI2367384, Length=545, Percent_Identity=30.8256880733945, Blast_Score=208, Evalue=7e-55,
Organism=Escherichia coli, GI1787182, Length=527, Percent_Identity=26.9449715370019, Blast_Score=182, Evalue=3e-47,
Organism=Escherichia coli, GI1788644, Length=240, Percent_Identity=27.5, Blast_Score=73, Evalue=6e-14,
Organism=Escherichia coli, GI1788450, Length=246, Percent_Identity=25.609756097561, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1786319, Length=226, Percent_Identity=23.0088495575221, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1787029, Length=238, Percent_Identity=24.7899159663866, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1789864, Length=234, Percent_Identity=24.3589743589744, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI48994883, Length=271, Percent_Identity=23.9852398523985, Blast_Score=65, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17553372, Length=523, Percent_Identity=28.8718929254302, Blast_Score=209, Evalue=4e-54,
Organism=Caenorhabditis elegans, GI17559834, Length=511, Percent_Identity=26.614481409002, Blast_Score=188, Evalue=7e-48,
Organism=Caenorhabditis elegans, GI17555318, Length=546, Percent_Identity=25.0915750915751, Blast_Score=184, Evalue=9e-47,
Organism=Saccharomyces cerevisiae, GI6320874, Length=519, Percent_Identity=31.2138728323699, Blast_Score=227, Evalue=3e-60,
Organism=Saccharomyces cerevisiae, GI6321121, Length=545, Percent_Identity=29.1743119266055, Blast_Score=218, Evalue=1e-57,
Organism=Saccharomyces cerevisiae, GI6325030, Length=236, Percent_Identity=30.9322033898305, Blast_Score=106, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6324314, Length=232, Percent_Identity=27.5862068965517, Blast_Score=91, Evalue=7e-19,
Organism=Saccharomyces cerevisiae, GI6323278, Length=229, Percent_Identity=26.6375545851528, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24666836, Length=520, Percent_Identity=30, Blast_Score=234, Evalue=1e-61,
Organism=Drosophila melanogaster, GI24642252, Length=521, Percent_Identity=27.2552783109405, Blast_Score=203, Evalue=3e-52,
Organism=Drosophila melanogaster, GI18859989, Length=521, Percent_Identity=27.2552783109405, Blast_Score=203, Evalue=3e-52,
Organism=Drosophila melanogaster, GI24641342, Length=542, Percent_Identity=26.9372693726937, Blast_Score=192, Evalue=5e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 61713; Mature: 61713

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAVSNLEVAFGERVLFKDVNVKFSSGNCYGIIGANGAGKSTFLKVLGGTIEPSKGEVAV
CEEECCEEHHHCCEEEEEECEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEE
AKNQRMAVLEQNQFAYDDFRVIDTVIMGHKKLYAVQREKDLIYEKPDFSDEDGIRAGELE
ECCCEEEEEECCCCCCHHHHHHHHHHHCCHHHEEEECCCCCCCCCCCCCCCCCCCCCCCH
AEFAELGGYEAESNAAVLLKGLGIEESVHSSLMRDIDAALKVRVLLAQALFGEPDILLLD
HHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
EPTNNLDIQSIKWLEEFLINFENTVIVVSHDRHFLNQVCTHIVDIDYGKIQVYLGNYDFW
CCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCEE
YETSQILNKQLKDAKKRSEEKIAELKTFIQRFSSNASKSRQATSRKKLIDKIRIEDLKPS
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC
SRKFPYVNFKSERDLGKNVITIKNLSKEFEGQHILNKFSIVIEPGQKVVFLGSPISASSL
CCCCCEEECCCCCCCCCCEEEEEHHHHHHCCHHHHEEEEEEEECCCEEEEEECCCCHHHH
FDVITNEDRDYKGHYEWGATVNFAYFKKDNEQYFSVDLSLVDWLRQYSKEQDETYIRGFL
HHHHCCCCCCCCCEEECCCEEEEEEEECCCCEEEEEEHHHHHHHHHHCCCCHHHHHHHHH
GRMLFSQDEALKKVNVLSGGEKVRCMLSKIMLSGANVLLLDQPTNHLDLEAITSLNTGLQ
HHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCHH
DFKGVVLFTSHDHQFIDTIANRIIEFTPNGIIDRFMTFSEYIDDSKVKELRDKLYEGHTS
HCCCEEEEECCCHHHHHHHHHHHEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCC
LKL
CCC
>Mature Secondary Structure
MIAVSNLEVAFGERVLFKDVNVKFSSGNCYGIIGANGAGKSTFLKVLGGTIEPSKGEVAV
CEEECCEEHHHCCEEEEEECEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEE
AKNQRMAVLEQNQFAYDDFRVIDTVIMGHKKLYAVQREKDLIYEKPDFSDEDGIRAGELE
ECCCEEEEEECCCCCCHHHHHHHHHHHCCHHHEEEECCCCCCCCCCCCCCCCCCCCCCCH
AEFAELGGYEAESNAAVLLKGLGIEESVHSSLMRDIDAALKVRVLLAQALFGEPDILLLD
HHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
EPTNNLDIQSIKWLEEFLINFENTVIVVSHDRHFLNQVCTHIVDIDYGKIQVYLGNYDFW
CCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCEE
YETSQILNKQLKDAKKRSEEKIAELKTFIQRFSSNASKSRQATSRKKLIDKIRIEDLKPS
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC
SRKFPYVNFKSERDLGKNVITIKNLSKEFEGQHILNKFSIVIEPGQKVVFLGSPISASSL
CCCCCEEECCCCCCCCCCEEEEEHHHHHHCCHHHHEEEEEEEECCCEEEEEECCCCHHHH
FDVITNEDRDYKGHYEWGATVNFAYFKKDNEQYFSVDLSLVDWLRQYSKEQDETYIRGFL
HHHHCCCCCCCCCEEECCCEEEEEEEECCCCEEEEEEHHHHHHHHHHCCCCHHHHHHHHH
GRMLFSQDEALKKVNVLSGGEKVRCMLSKIMLSGANVLLLDQPTNHLDLEAITSLNTGLQ
HHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCHH
DFKGVVLFTSHDHQFIDTIANRIIEFTPNGIIDRFMTFSEYIDDSKVKELRDKLYEGHTS
HCCCEEEEECCCHHHHHHHHHHHEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCC
LKL
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]