| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is cysJ [H]
Identifier: 187735137
GI number: 187735137
Start: 741529
End: 742659
Strand: Direct
Name: cysJ [H]
Synonym: Amuc_0631
Alternate gene names: 187735137
Gene position: 741529-742659 (Clockwise)
Preceding gene: 187735136
Following gene: 187735139
Centisome position: 27.83
GC content: 60.83
Gene sequence:
>1131_bases ATGACCACTGAACCATACGGCAAAAAAAATCCGTTTCCCGCTCCCGTCCTCTCCGTCAGGCATATCACCGGGGAAGGCAG CCCCAAGGAAACCATCCACATTGAATACAGCCTGGACGGTTCCGGGATGAATTATATTGCCGGGGACGCCCTGGCCGTCA TTCCCGCCAATGACCCCTCCCTGGCGGACGCCCTGATTGACAAGCTCGGCCTCAGCCCGGATTCCCAGGTTCCCACGCCC GAAGGGGAAACCGCAAGCCTGAAAGACGCCCTGGTTCACTGCTATGACATTACCAATGTCAACAAAGCCCTGCTGACCAA GTGGGCCGCCGCCTCCGGCAGCCAGGAGCTGGACACGCTTCTGGCCGGGGATAAGGACGCCCTCAGCGATTTCCTGTGGG GCCGGGACGTGCTGGATCTGGCCACGGAATACCCCGCTTCCTTCGAATCCGCGGAGGCTTTTGTCGGCATCCTGAAAAAG ATCATGCCGCGCCTTTATTCCATCGCCTCCAGCCCGAACGCCCATCCCGAACAGGTTCACCTGTGCGTGGGCGCGGTACG CTATACGGCCCGTGACCGCAAGCGCGGCGGCGTTTGCTCCACCTATATGGCGGACCGCCTCCAGCCGGGCCATACGGCCA GGGTATTCGTACATACCAACAAGAATTTCCGCCTTCCGGAAGACGGGGACACCCCCATCATCATGGTGGGCCCCGGCACC GGCATCGCCCCTTTCCGGGCATTCTGGGAGGAACGCGCCGCTTCCGGCGCCAAGGGCGGCAACTGGCTGTTCTTCGGCAA TCCGTACAAGGCCACCGACTTCTGTTATGAAGACGAGCTGAACCAGTTGACCGGCACCGGCAAACTGAAGTTGTCCGTGG CCTGGTCCCGAGACCAGGAAAAGAAGGTGTATGTGCAGCACCTCATGGTCCAGGAAGGCGAAGAGCTCTGGAAATGGCTG GAAGCCGGCGCCTGCTTCTACGTCTGCGGGGACGCCTCCCGCATGGCGAAGGATGTGGACAACGCCCTTCATGAAGTCAT CCAGACCTGGGGCCATAAAACTCCGGAGGAAGCCGCGGCATATGTGGCGGACATGAAACAGCACCGCCGTTACCAGCGGG ACGTGTACTAA
Upstream 100 bases:
>100_bases AAGGGAGACAACGTCGTCCTGGTCACATTCGGCGCCGGGCTTACCTGGTCCGCCGCCGTTATCCGCTGGTAATATTCTTT TTCACCCCCCCTCCATCATC
Downstream 100 bases:
>100_bases TTCAGGATCTCCCCCTTGAACCTGTCACCGCGCCTTTCCATTTTTTCTGGAAAGGCGCTTTTTCTTTTTCCGGAGAAAAC CCGCCACGCATCATCACTCC
Product: FAD-binding domain protein
Products: NA
Alternate protein names: SiR-FP [H]
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MTTEPYGKKNPFPAPVLSVRHITGEGSPKETIHIEYSLDGSGMNYIAGDALAVIPANDPSLADALIDKLGLSPDSQVPTP EGETASLKDALVHCYDITNVNKALLTKWAAASGSQELDTLLAGDKDALSDFLWGRDVLDLATEYPASFESAEAFVGILKK IMPRLYSIASSPNAHPEQVHLCVGAVRYTARDRKRGGVCSTYMADRLQPGHTARVFVHTNKNFRLPEDGDTPIIMVGPGT GIAPFRAFWEERAASGAKGGNWLFFGNPYKATDFCYEDELNQLTGTGKLKLSVAWSRDQEKKVYVQHLMVQEGEELWKWL EAGACFYVCGDASRMAKDVDNALHEVIQTWGHKTPEEAAAYVADMKQHRRYQRDVY
Sequences:
>Translated_376_residues MTTEPYGKKNPFPAPVLSVRHITGEGSPKETIHIEYSLDGSGMNYIAGDALAVIPANDPSLADALIDKLGLSPDSQVPTP EGETASLKDALVHCYDITNVNKALLTKWAAASGSQELDTLLAGDKDALSDFLWGRDVLDLATEYPASFESAEAFVGILKK IMPRLYSIASSPNAHPEQVHLCVGAVRYTARDRKRGGVCSTYMADRLQPGHTARVFVHTNKNFRLPEDGDTPIIMVGPGT GIAPFRAFWEERAASGAKGGNWLFFGNPYKATDFCYEDELNQLTGTGKLKLSVAWSRDQEKKVYVQHLMVQEGEELWKWL EAGACFYVCGDASRMAKDVDNALHEVIQTWGHKTPEEAAAYVADMKQHRRYQRDVY >Mature_375_residues TTEPYGKKNPFPAPVLSVRHITGEGSPKETIHIEYSLDGSGMNYIAGDALAVIPANDPSLADALIDKLGLSPDSQVPTPE GETASLKDALVHCYDITNVNKALLTKWAAASGSQELDTLLAGDKDALSDFLWGRDVLDLATEYPASFESAEAFVGILKKI MPRLYSIASSPNAHPEQVHLCVGAVRYTARDRKRGGVCSTYMADRLQPGHTARVFVHTNKNFRLPEDGDTPIIMVGPGTG IAPFRAFWEERAASGAKGGNWLFFGNPYKATDFCYEDELNQLTGTGKLKLSVAWSRDQEKKVYVQHLMVQEGEELWKWLE AGACFYVCGDASRMAKDVDNALHEVIQTWGHKTPEEAAAYVADMKQHRRYQRDVY
Specific function: Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow f
COG id: COG0369
COG function: function code P; Sulfite reductase, alpha subunit (flavoprotein)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
Organism=Homo sapiens, GI7657393, Length=400, Percent_Identity=34, Blast_Score=208, Evalue=8e-54, Organism=Homo sapiens, GI127139033, Length=404, Percent_Identity=33.6633663366337, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI221316705, Length=409, Percent_Identity=33.2518337408313, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI221316709, Length=400, Percent_Identity=33.5, Blast_Score=196, Evalue=2e-50, Organism=Homo sapiens, GI24041029, Length=402, Percent_Identity=32.3383084577114, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI221316707, Length=357, Percent_Identity=33.0532212885154, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI10835173, Length=409, Percent_Identity=31.7848410757946, Blast_Score=164, Evalue=9e-41, Organism=Homo sapiens, GI40254422, Length=409, Percent_Identity=29.3398533007335, Blast_Score=152, Evalue=7e-37, Organism=Homo sapiens, GI169790956, Length=426, Percent_Identity=28.169014084507, Blast_Score=138, Evalue=9e-33, Organism=Homo sapiens, GI169790958, Length=426, Percent_Identity=28.169014084507, Blast_Score=138, Evalue=9e-33, Organism=Escherichia coli, GI1789123, Length=375, Percent_Identity=45.0666666666667, Blast_Score=317, Evalue=1e-87, Organism=Caenorhabditis elegans, GI17554134, Length=402, Percent_Identity=33.3333333333333, Blast_Score=215, Evalue=4e-56, Organism=Caenorhabditis elegans, GI17566446, Length=369, Percent_Identity=28.9972899728997, Blast_Score=121, Evalue=5e-28, Organism=Caenorhabditis elegans, GI17531441, Length=413, Percent_Identity=23.9709443099274, Blast_Score=87, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6321832, Length=437, Percent_Identity=29.7482837528604, Blast_Score=144, Evalue=3e-35, Organism=Saccharomyces cerevisiae, GI6321143, Length=393, Percent_Identity=28.2442748091603, Blast_Score=125, Evalue=8e-30, Organism=Saccharomyces cerevisiae, GI6325305, Length=397, Percent_Identity=27.455919395466, Blast_Score=119, Evalue=8e-28, Organism=Drosophila melanogaster, GI24582192, Length=401, Percent_Identity=34.1645885286783, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI17137192, Length=401, Percent_Identity=34.1645885286783, Blast_Score=212, Evalue=3e-55, Organism=Drosophila melanogaster, GI78706872, Length=374, Percent_Identity=31.0160427807487, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI24583543, Length=374, Percent_Identity=31.0160427807487, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI78706876, Length=374, Percent_Identity=31.0160427807487, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI24660907, Length=250, Percent_Identity=32.8, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI24660903, Length=250, Percent_Identity=32.8, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI24647438, Length=386, Percent_Identity=23.8341968911917, Blast_Score=89, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010199 - InterPro: IPR003097 - InterPro: IPR017927 - InterPro: IPR001094 - InterPro: IPR008254 - InterPro: IPR001709 - InterPro: IPR023173 - InterPro: IPR001433 - InterPro: IPR017938 [H]
Pfam domain/function: PF00667 FAD_binding_1; PF00258 Flavodoxin_1; PF00175 NAD_binding_1 [H]
EC number: =1.8.1.2 [H]
Molecular weight: Translated: 41445; Mature: 41314
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTEPYGKKNPFPAPVLSVRHITGEGSPKETIHIEYSLDGSGMNYIAGDALAVIPANDPS CCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCEECCCEEEEEECCCCH LADALIDKLGLSPDSQVPTPEGETASLKDALVHCYDITNVNKALLTKWAAASGSQELDTL HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHH LAGDKDALSDFLWGRDVLDLATEYPASFESAEAFVGILKKIMPRLYSIASSPNAHPEQVH HCCCHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LCVGAVRYTARDRKRGGVCSTYMADRLQPGHTARVFVHTNKNFRLPEDGDTPIIMVGPGT HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEEEECCCEECCCCCCCCEEEECCCC GIAPFRAFWEERAASGAKGGNWLFFGNPYKATDFCYEDELNQLTGTGKLKLSVAWSRDQE CCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCH KKVYVQHLMVQEGEELWKWLEAGACFYVCGDASRMAKDVDNALHEVIQTWGHKTPEEAAA HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH YVADMKQHRRYQRDVY HHHHHHHHHHHHHCCC >Mature Secondary Structure TTEPYGKKNPFPAPVLSVRHITGEGSPKETIHIEYSLDGSGMNYIAGDALAVIPANDPS CCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCEECCCEEEEEECCCCH LADALIDKLGLSPDSQVPTPEGETASLKDALVHCYDITNVNKALLTKWAAASGSQELDTL HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHH LAGDKDALSDFLWGRDVLDLATEYPASFESAEAFVGILKKIMPRLYSIASSPNAHPEQVH HCCCHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LCVGAVRYTARDRKRGGVCSTYMADRLQPGHTARVFVHTNKNFRLPEDGDTPIIMVGPGT HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEEEECCCEECCCCCCCCEEEECCCC GIAPFRAFWEERAASGAKGGNWLFFGNPYKATDFCYEDELNQLTGTGKLKLSVAWSRDQE CCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCH KKVYVQHLMVQEGEELWKWLEAGACFYVCGDASRMAKDVDNALHEVIQTWGHKTPEEAAA HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH YVADMKQHRRYQRDVY HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]