| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is epsJ [H]
Identifier: 187735139
GI number: 187735139
Start: 744587
End: 745624
Strand: Direct
Name: epsJ [H]
Synonym: Amuc_0633
Alternate gene names: 187735139
Gene position: 744587-745624 (Clockwise)
Preceding gene: 187735137
Following gene: 187735140
Centisome position: 27.95
GC content: 53.28
Gene sequence:
>1038_bases ATGCAGAAACCGTTCTTCAGCATTATTATCCCGGCCTATAATCTGGAGAATTATATTGCTGCCACCCTTCAGTCAGTACT GGTTCAAACATTTCAGGATTTTGAGATCATCATCGTGGATGACGGTTCTTCCGATGAGACTGTTTCCATCATCCAATCTT TTCATGACCCCAGAATTCGCCTGGTTTCCCAAGTTAACGGCGGCGTATCGCGAGCGCGAAACGCAGGGATGAAGAAGGCC GTGGGGGCTTACATCGCTTTCCTGGACGGAGACGATTACTGGTATCCCGAGCATCTGGAGCTGGCAGCCGATTTTTTCAA CCGTCATCCGGAGATATTGGCCTATGCCAACCGCTACATGAGGGATGAACTGGAGGCCATCCCGCCGCGCCCTCCATCTT ATCCCGAATCTATCCGGAGATTGGGGATACGGGGAGTGCTTTTCATGAATTCCAGCAGCGTAATCCTGAATTCGTCTCTT GCGTCCCGGCTTCCCCCCTGGGAAGAAGCGATGCCCTATGGGGAAGACGGCCTGTACTGGACACGGTGCATGCGGGGGAC AGGCCTGATCGGGCTGGGAGGCTCCGTCACCTCCATCTACAGGCAGAGAGCTTCTTCCGCCATGCATGACGAGCATTACC AGCATGTCTCCCTCCACTCGCTCATTGCGCCTCTGCTGAATGAGCTTGAAGCCATGAAAAATCCCAAATGGCAATTTGCC GTCCATTATCTGGTCATCAGGGAATTGCATCCCAAAAGACTGTTATCGCTCAACGCAGAGGAGCGGATTTCCCTGACGGG CAGGATCAGGAAAATCATGCACCCATGCCTGAACCGGCCGTTTTTGGACTCCTATATGAAAGCGTGTTCCGCAAGGGCAG GCATGGAACAGTCATTTTCCGCGCTCATGGACAGAACCATGTTCTCCTGCAAATGGCTGGACCGCCTGGAAAGGATGGGC CGCTCCCTGTTTTTCCGGCTGCAAACCAATAACGGAATGGGGGGCAAACACCAAGATCCAGTCCGTTCACGCTCATGA
Upstream 100 bases:
>100_bases CTGCCATTCACCGGTTGCAATGGTTACAGCCCCATCAGAATCATGTCCTCCATATCCTGATTCCCGTTCCACTCACGAAG CAGTTCATCATTCCCCTTGT
Downstream 100 bases:
>100_bases ATATCGTATACGCTACAGACGATAACGGCGCGCTGGGAACGGGCGTGAGCATTGTGTCCCTCATGGAGAATTTGCCGCCC GGCGTTCATGCCGATATTTA
Product: glycosyl transferase family 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MQKPFFSIIIPAYNLENYIAATLQSVLVQTFQDFEIIIVDDGSSDETVSIIQSFHDPRIRLVSQVNGGVSRARNAGMKKA VGAYIAFLDGDDYWYPEHLELAADFFNRHPEILAYANRYMRDELEAIPPRPPSYPESIRRLGIRGVLFMNSSSVILNSSL ASRLPPWEEAMPYGEDGLYWTRCMRGTGLIGLGGSVTSIYRQRASSAMHDEHYQHVSLHSLIAPLLNELEAMKNPKWQFA VHYLVIRELHPKRLLSLNAEERISLTGRIRKIMHPCLNRPFLDSYMKACSARAGMEQSFSALMDRTMFSCKWLDRLERMG RSLFFRLQTNNGMGGKHQDPVRSRS
Sequences:
>Translated_345_residues MQKPFFSIIIPAYNLENYIAATLQSVLVQTFQDFEIIIVDDGSSDETVSIIQSFHDPRIRLVSQVNGGVSRARNAGMKKA VGAYIAFLDGDDYWYPEHLELAADFFNRHPEILAYANRYMRDELEAIPPRPPSYPESIRRLGIRGVLFMNSSSVILNSSL ASRLPPWEEAMPYGEDGLYWTRCMRGTGLIGLGGSVTSIYRQRASSAMHDEHYQHVSLHSLIAPLLNELEAMKNPKWQFA VHYLVIRELHPKRLLSLNAEERISLTGRIRKIMHPCLNRPFLDSYMKACSARAGMEQSFSALMDRTMFSCKWLDRLERMG RSLFFRLQTNNGMGGKHQDPVRSRS >Mature_345_residues MQKPFFSIIIPAYNLENYIAATLQSVLVQTFQDFEIIIVDDGSSDETVSIIQSFHDPRIRLVSQVNGGVSRARNAGMKKA VGAYIAFLDGDDYWYPEHLELAADFFNRHPEILAYANRYMRDELEAIPPRPPSYPESIRRLGIRGVLFMNSSSVILNSSL ASRLPPWEEAMPYGEDGLYWTRCMRGTGLIGLGGSVTSIYRQRASSAMHDEHYQHVSLHSLIAPLLNELEAMKNPKWQFA VHYLVIRELHPKRLLSLNAEERISLTGRIRKIMHPCLNRPFLDSYMKACSARAGMEQSFSALMDRTMFSCKWLDRLERMG RSLFFRLQTNNGMGGKHQDPVRSRS
Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1790044, Length=97, Percent_Identity=42.2680412371134, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1788372, Length=143, Percent_Identity=32.8671328671329, Blast_Score=74, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 39424; Mature: 39424
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKPFFSIIIPAYNLENYIAATLQSVLVQTFQDFEIIIVDDGSSDETVSIIQSFHDPRIR CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCHHH LVSQVNGGVSRARNAGMKKAVGAYIAFLDGDDYWYPEHLELAADFFNRHPEILAYANRYM HHHHHCCHHHHHHHCCHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH RDELEAIPPRPPSYPESIRRLGIRGVLFMNSSSVILNSSLASRLPPWEEAMPYGEDGLYW HHHHHCCCCCCCCCHHHHHHCCCCEEEEECCCCCEEECHHHHHCCCHHHCCCCCCCCHHH TRCMRGTGLIGLGGSVTSIYRQRASSAMHDEHYQHVSLHSLIAPLLNELEAMKNPKWQFA HHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH VHYLVIRELHPKRLLSLNAEERISLTGRIRKIMHPCLNRPFLDSYMKACSARAGMEQSFS HHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHH ALMDRTMFSCKWLDRLERMGRSLFFRLQTNNGMGGKHQDPVRSRS HHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MQKPFFSIIIPAYNLENYIAATLQSVLVQTFQDFEIIIVDDGSSDETVSIIQSFHDPRIR CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCHHH LVSQVNGGVSRARNAGMKKAVGAYIAFLDGDDYWYPEHLELAADFFNRHPEILAYANRYM HHHHHCCHHHHHHHCCHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH RDELEAIPPRPPSYPESIRRLGIRGVLFMNSSSVILNSSLASRLPPWEEAMPYGEDGLYW HHHHHCCCCCCCCCHHHHHHCCCCEEEEECCCCCEEECHHHHHCCCHHHCCCCCCCCHHH TRCMRGTGLIGLGGSVTSIYRQRASSAMHDEHYQHVSLHSLIAPLLNELEAMKNPKWQFA HHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH VHYLVIRELHPKRLLSLNAEERISLTGRIRKIMHPCLNRPFLDSYMKACSARAGMEQSFS HHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHH ALMDRTMFSCKWLDRLERMGRSLFFRLQTNNGMGGKHQDPVRSRS HHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]