Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is epsJ [H]

Identifier: 187735139

GI number: 187735139

Start: 744587

End: 745624

Strand: Direct

Name: epsJ [H]

Synonym: Amuc_0633

Alternate gene names: 187735139

Gene position: 744587-745624 (Clockwise)

Preceding gene: 187735137

Following gene: 187735140

Centisome position: 27.95

GC content: 53.28

Gene sequence:

>1038_bases
ATGCAGAAACCGTTCTTCAGCATTATTATCCCGGCCTATAATCTGGAGAATTATATTGCTGCCACCCTTCAGTCAGTACT
GGTTCAAACATTTCAGGATTTTGAGATCATCATCGTGGATGACGGTTCTTCCGATGAGACTGTTTCCATCATCCAATCTT
TTCATGACCCCAGAATTCGCCTGGTTTCCCAAGTTAACGGCGGCGTATCGCGAGCGCGAAACGCAGGGATGAAGAAGGCC
GTGGGGGCTTACATCGCTTTCCTGGACGGAGACGATTACTGGTATCCCGAGCATCTGGAGCTGGCAGCCGATTTTTTCAA
CCGTCATCCGGAGATATTGGCCTATGCCAACCGCTACATGAGGGATGAACTGGAGGCCATCCCGCCGCGCCCTCCATCTT
ATCCCGAATCTATCCGGAGATTGGGGATACGGGGAGTGCTTTTCATGAATTCCAGCAGCGTAATCCTGAATTCGTCTCTT
GCGTCCCGGCTTCCCCCCTGGGAAGAAGCGATGCCCTATGGGGAAGACGGCCTGTACTGGACACGGTGCATGCGGGGGAC
AGGCCTGATCGGGCTGGGAGGCTCCGTCACCTCCATCTACAGGCAGAGAGCTTCTTCCGCCATGCATGACGAGCATTACC
AGCATGTCTCCCTCCACTCGCTCATTGCGCCTCTGCTGAATGAGCTTGAAGCCATGAAAAATCCCAAATGGCAATTTGCC
GTCCATTATCTGGTCATCAGGGAATTGCATCCCAAAAGACTGTTATCGCTCAACGCAGAGGAGCGGATTTCCCTGACGGG
CAGGATCAGGAAAATCATGCACCCATGCCTGAACCGGCCGTTTTTGGACTCCTATATGAAAGCGTGTTCCGCAAGGGCAG
GCATGGAACAGTCATTTTCCGCGCTCATGGACAGAACCATGTTCTCCTGCAAATGGCTGGACCGCCTGGAAAGGATGGGC
CGCTCCCTGTTTTTCCGGCTGCAAACCAATAACGGAATGGGGGGCAAACACCAAGATCCAGTCCGTTCACGCTCATGA

Upstream 100 bases:

>100_bases
CTGCCATTCACCGGTTGCAATGGTTACAGCCCCATCAGAATCATGTCCTCCATATCCTGATTCCCGTTCCACTCACGAAG
CAGTTCATCATTCCCCTTGT

Downstream 100 bases:

>100_bases
ATATCGTATACGCTACAGACGATAACGGCGCGCTGGGAACGGGCGTGAGCATTGTGTCCCTCATGGAGAATTTGCCGCCC
GGCGTTCATGCCGATATTTA

Product: glycosyl transferase family 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MQKPFFSIIIPAYNLENYIAATLQSVLVQTFQDFEIIIVDDGSSDETVSIIQSFHDPRIRLVSQVNGGVSRARNAGMKKA
VGAYIAFLDGDDYWYPEHLELAADFFNRHPEILAYANRYMRDELEAIPPRPPSYPESIRRLGIRGVLFMNSSSVILNSSL
ASRLPPWEEAMPYGEDGLYWTRCMRGTGLIGLGGSVTSIYRQRASSAMHDEHYQHVSLHSLIAPLLNELEAMKNPKWQFA
VHYLVIRELHPKRLLSLNAEERISLTGRIRKIMHPCLNRPFLDSYMKACSARAGMEQSFSALMDRTMFSCKWLDRLERMG
RSLFFRLQTNNGMGGKHQDPVRSRS

Sequences:

>Translated_345_residues
MQKPFFSIIIPAYNLENYIAATLQSVLVQTFQDFEIIIVDDGSSDETVSIIQSFHDPRIRLVSQVNGGVSRARNAGMKKA
VGAYIAFLDGDDYWYPEHLELAADFFNRHPEILAYANRYMRDELEAIPPRPPSYPESIRRLGIRGVLFMNSSSVILNSSL
ASRLPPWEEAMPYGEDGLYWTRCMRGTGLIGLGGSVTSIYRQRASSAMHDEHYQHVSLHSLIAPLLNELEAMKNPKWQFA
VHYLVIRELHPKRLLSLNAEERISLTGRIRKIMHPCLNRPFLDSYMKACSARAGMEQSFSALMDRTMFSCKWLDRLERMG
RSLFFRLQTNNGMGGKHQDPVRSRS
>Mature_345_residues
MQKPFFSIIIPAYNLENYIAATLQSVLVQTFQDFEIIIVDDGSSDETVSIIQSFHDPRIRLVSQVNGGVSRARNAGMKKA
VGAYIAFLDGDDYWYPEHLELAADFFNRHPEILAYANRYMRDELEAIPPRPPSYPESIRRLGIRGVLFMNSSSVILNSSL
ASRLPPWEEAMPYGEDGLYWTRCMRGTGLIGLGGSVTSIYRQRASSAMHDEHYQHVSLHSLIAPLLNELEAMKNPKWQFA
VHYLVIRELHPKRLLSLNAEERISLTGRIRKIMHPCLNRPFLDSYMKACSARAGMEQSFSALMDRTMFSCKWLDRLERMG
RSLFFRLQTNNGMGGKHQDPVRSRS

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=97, Percent_Identity=42.2680412371134, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1788372, Length=143, Percent_Identity=32.8671328671329, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 39424; Mature: 39424

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKPFFSIIIPAYNLENYIAATLQSVLVQTFQDFEIIIVDDGSSDETVSIIQSFHDPRIR
CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCHHH
LVSQVNGGVSRARNAGMKKAVGAYIAFLDGDDYWYPEHLELAADFFNRHPEILAYANRYM
HHHHHCCHHHHHHHCCHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH
RDELEAIPPRPPSYPESIRRLGIRGVLFMNSSSVILNSSLASRLPPWEEAMPYGEDGLYW
HHHHHCCCCCCCCCHHHHHHCCCCEEEEECCCCCEEECHHHHHCCCHHHCCCCCCCCHHH
TRCMRGTGLIGLGGSVTSIYRQRASSAMHDEHYQHVSLHSLIAPLLNELEAMKNPKWQFA
HHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VHYLVIRELHPKRLLSLNAEERISLTGRIRKIMHPCLNRPFLDSYMKACSARAGMEQSFS
HHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHH
ALMDRTMFSCKWLDRLERMGRSLFFRLQTNNGMGGKHQDPVRSRS
HHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQKPFFSIIIPAYNLENYIAATLQSVLVQTFQDFEIIIVDDGSSDETVSIIQSFHDPRIR
CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCHHH
LVSQVNGGVSRARNAGMKKAVGAYIAFLDGDDYWYPEHLELAADFFNRHPEILAYANRYM
HHHHHCCHHHHHHHCCHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH
RDELEAIPPRPPSYPESIRRLGIRGVLFMNSSSVILNSSLASRLPPWEEAMPYGEDGLYW
HHHHHCCCCCCCCCHHHHHHCCCCEEEEECCCCCEEECHHHHHCCCHHHCCCCCCCCHHH
TRCMRGTGLIGLGGSVTSIYRQRASSAMHDEHYQHVSLHSLIAPLLNELEAMKNPKWQFA
HHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VHYLVIRELHPKRLLSLNAEERISLTGRIRKIMHPCLNRPFLDSYMKACSARAGMEQSFS
HHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHH
ALMDRTMFSCKWLDRLERMGRSLFFRLQTNNGMGGKHQDPVRSRS
HHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]