| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is fabH [H]
Identifier: 187735136
GI number: 187735136
Start: 740481
End: 741500
Strand: Direct
Name: fabH [H]
Synonym: Amuc_0630
Alternate gene names: 187735136
Gene position: 740481-741500 (Clockwise)
Preceding gene: 187735135
Following gene: 187735137
Centisome position: 27.79
GC content: 60.88
Gene sequence:
>1020_bases ATGGCCGCACATTCTGATATTCCCTTTAAAAGACTGCCCGTCAAGATTATCGGTACGGGTTCCTATGTTCCGGAACGCCG CCTGACCAATGCGGATCTGGAGAAGATGGTGGACACTTCCCACGAATGGATTATTGAACGCACGGGCATTGTGGAACGCC GCATCGCCGCCCCTGACGAGTACACTTCCCATATGGGGACGAAGGCCGCCCAGCGCGCTCTGGAATCCTGCGGGCTGAAG CCGGAGGATATTGACCTGATTATCGTCGCCACCATCACGCCGGATACGTTCACCCCTTCCACTTCCTGCTATATCCAGGA TGCCCTTGGCGCCAAGAATGCCGCCGCCTTTGACATTTCCGCCGCCTGCTCCGGCTTCCTGTTCGCCATGAAGACCGCCG TCCAGTACATCGGCACCGGCCAGATGAAAACGGCGCTCATCATCGCCGCTGAAAAACTTTCCACCGTCGTCAACTGGGAG GACCGCAGCACCTGCGTCCTGTTCGGGGACGGCGCCGGGGCAGCCGTGCTCCAGGCTTCCACAGGGGAAGAGGGAGAAGG TTCCGTCCTTGCCACGGATATCGGTTCGGACGGCTCCCTGCATGACCTGCTCCAGATTCCGGGCGGCGGCTCCCGCTGCC CCACCACAGCGGAAAACGCCCATGAACGCCTGGCTACCCTGGCCATGCGCGGCAATGAGACCTTCCGCCATGCCGTCACG CGCATGAAGGCTTCCGCCGCCAGCGTCATTGAACGCGCCGGCCTCACGGCGGACGATATCCAGCTGATTATTCCCCACCA GGCCAATCTCCGCATCATTAACGCCGTAGCGCAGCGCCTTTCCATTCCTGAAGATAAGGTGTTCGTGAACATTGAGAAGT ACGGCAACACGTCCGCGGCCGCCGTCGCCATCGCTTTTGACGAAGCGCGCCGTTCCGGCAGATTCGGCAAGGGAGACAAC GTCGTCCTGGTCACATTCGGCGCCGGGCTTACCTGGTCCGCCGCCGTTATCCGCTGGTAA
Upstream 100 bases:
>100_bases AGGAGTCCTGCGTTTTATGCTGGTCATCAGGCCCTCTTTCTTTTAGACTGTTTCCACATAAAACGTCAGGACGTTTTCTG TTCATCATACGCCCAAAGCT
Downstream 100 bases:
>100_bases TATTCTTTTTCACCCCCCCTCCATCATCATGACCACTGAACCATACGGCAAAAAAAATCCGTTTCCCGCTCCCGTCCTCT CCGTCAGGCATATCACCGGG
Product: 3-oxoacyl-(acyl-carrier-protein) synthase III
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III [H]
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MAAHSDIPFKRLPVKIIGTGSYVPERRLTNADLEKMVDTSHEWIIERTGIVERRIAAPDEYTSHMGTKAAQRALESCGLK PEDIDLIIVATITPDTFTPSTSCYIQDALGAKNAAAFDISAACSGFLFAMKTAVQYIGTGQMKTALIIAAEKLSTVVNWE DRSTCVLFGDGAGAAVLQASTGEEGEGSVLATDIGSDGSLHDLLQIPGGGSRCPTTAENAHERLATLAMRGNETFRHAVT RMKASAASVIERAGLTADDIQLIIPHQANLRIINAVAQRLSIPEDKVFVNIEKYGNTSAAAVAIAFDEARRSGRFGKGDN VVLVTFGAGLTWSAAVIRW
Sequences:
>Translated_339_residues MAAHSDIPFKRLPVKIIGTGSYVPERRLTNADLEKMVDTSHEWIIERTGIVERRIAAPDEYTSHMGTKAAQRALESCGLK PEDIDLIIVATITPDTFTPSTSCYIQDALGAKNAAAFDISAACSGFLFAMKTAVQYIGTGQMKTALIIAAEKLSTVVNWE DRSTCVLFGDGAGAAVLQASTGEEGEGSVLATDIGSDGSLHDLLQIPGGGSRCPTTAENAHERLATLAMRGNETFRHAVT RMKASAASVIERAGLTADDIQLIIPHQANLRIINAVAQRLSIPEDKVFVNIEKYGNTSAAAVAIAFDEARRSGRFGKGDN VVLVTFGAGLTWSAAVIRW >Mature_338_residues AAHSDIPFKRLPVKIIGTGSYVPERRLTNADLEKMVDTSHEWIIERTGIVERRIAAPDEYTSHMGTKAAQRALESCGLKP EDIDLIIVATITPDTFTPSTSCYIQDALGAKNAAAFDISAACSGFLFAMKTAVQYIGTGQMKTALIIAAEKLSTVVNWED RSTCVLFGDGAGAAVLQASTGEEGEGSVLATDIGSDGSLHDLLQIPGGGSRCPTTAENAHERLATLAMRGNETFRHAVTR MKASAASVIERAGLTADDIQLIIPHQANLRIINAVAQRLSIPEDKVFVNIEKYGNTSAAAVAIAFDEARRSGRFGKGDNV VLVTFGAGLTWSAAVIRW
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
Organism=Escherichia coli, GI1787333, Length=325, Percent_Identity=46.1538461538462, Blast_Score=282, Evalue=3e-77,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.180 [H]
Molecular weight: Translated: 36134; Mature: 36003
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAHSDIPFKRLPVKIIGTGSYVPERRLTNADLEKMVDTSHEWIIERTGIVERRIAAPDE CCCCCCCCHHHCCEEEEECCCCCCCCCCCCHHHHHHHCCCHHEEEECCCCHHHHCCCCHH YTSHMGTKAAQRALESCGLKPEDIDLIIVATITPDTFTPSTSCYIQDALGAKNAAAFDIS HHHHCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCEEEHH AACSGFLFAMKTAVQYIGTGQMKTALIIAAEKLSTVVNWEDRSTCVLFGDGAGAAVLQAS HHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHEECCCCCCEEEEEECCCCCEEEEEC TGEEGEGSVLATDIGSDGSLHDLLQIPGGGSRCPTTAENAHERLATLAMRGNETFRHAVT CCCCCCCCEEEEECCCCCCHHHHEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH RMKASAASVIERAGLTADDIQLIIPHQANLRIINAVAQRLSIPEDKVFVNIEKYGNTSAA HHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCE AVAIAFDEARRSGRFGKGDNVVLVTFGAGLTWSAAVIRW EEEEEEHHHHHCCCCCCCCCEEEEEECCCCEECEEEEEC >Mature Secondary Structure AAHSDIPFKRLPVKIIGTGSYVPERRLTNADLEKMVDTSHEWIIERTGIVERRIAAPDE CCCCCCCHHHCCEEEEECCCCCCCCCCCCHHHHHHHCCCHHEEEECCCCHHHHCCCCHH YTSHMGTKAAQRALESCGLKPEDIDLIIVATITPDTFTPSTSCYIQDALGAKNAAAFDIS HHHHCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCEEEHH AACSGFLFAMKTAVQYIGTGQMKTALIIAAEKLSTVVNWEDRSTCVLFGDGAGAAVLQAS HHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHEECCCCCCEEEEEECCCCCEEEEEC TGEEGEGSVLATDIGSDGSLHDLLQIPGGGSRCPTTAENAHERLATLAMRGNETFRHAVT CCCCCCCCEEEEECCCCCCHHHHEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH RMKASAASVIERAGLTADDIQLIIPHQANLRIINAVAQRLSIPEDKVFVNIEKYGNTSAA HHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCE AVAIAFDEARRSGRFGKGDNVVLVTFGAGLTWSAAVIRW EEEEEEHHHHHCCCCCCCCCEEEEEECCCCEECEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]