| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187735040
Identifier: 187735040
GI number: 187735040
Start: 627835
End: 628338
Strand: Direct
Name: 187735040
Synonym: Amuc_0533
Alternate gene names: NA
Gene position: 627835-628338 (Clockwise)
Preceding gene: 187735039
Following gene: 187735041
Centisome position: 23.57
GC content: 58.33
Gene sequence:
>504_bases ATGGGAGCCGGTCTTCCGCCGGCCCCCATTTTTCATTTTACCACACTCTTGAGCGATATGACCCTCCACTTTGAAGTTAT CAGCCGGTTCCAGGCCGCCGCCAATGCGGACGCCCTGCTCTATACCCCCCTGAACGCCGGCCTCACTTTCCGCCGCAGCC GCGTTTACACCGTAGAAATCACCGGGGACGAACAAAAAGCCCGCGAATACCTCCTGAGTGTGCTGGTGGACCCCATTTCC CAGGAATGCACGGAACAGAACGCTCCCATCCTGAAAGGCGCCCTGTTCACGATTGACTACGGCATGAAAGCCGGCGCCCT GGATCTGGAAAAAGAAGCCATCCTGCAAAACTACCGCGGGCGCCGGAATATGGGCTTTACTATGGACGGCCTGAAAATCA CCCAGCGCGTGTACGTCTTCGGCCAGGGAGACAAGGAAACCCTGGCGGCGCGCTTTGCCAAGGACGTCTGCAACCCCGCC ATTCACAACTGGACCATCGCCTAA
Upstream 100 bases:
>100_bases ACAAGGACCGCTTCCGCCAGGACCTCGGCAACGTGATGGAAGCCTACGAAGAAGTCCTTTCCCGGCTCCAGAACAAGGCT TGAGCCTCTTCCCCCTTCCC
Downstream 100 bases:
>100_bases CCCTTTTCCTTTCCCATCCACATGTCCGCCAAAACCTACCGAACCGTTCCCGTGAGGAACCTGAGCAGCGACGAACTGCT TGAGCTCAGCAAGAAACAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MGAGLPPAPIFHFTTLLSDMTLHFEVISRFQAAANADALLYTPLNAGLTFRRSRVYTVEITGDEQKAREYLLSVLVDPIS QECTEQNAPILKGALFTIDYGMKAGALDLEKEAILQNYRGRRNMGFTMDGLKITQRVYVFGQGDKETLAARFAKDVCNPA IHNWTIA
Sequences:
>Translated_167_residues MGAGLPPAPIFHFTTLLSDMTLHFEVISRFQAAANADALLYTPLNAGLTFRRSRVYTVEITGDEQKAREYLLSVLVDPIS QECTEQNAPILKGALFTIDYGMKAGALDLEKEAILQNYRGRRNMGFTMDGLKITQRVYVFGQGDKETLAARFAKDVCNPA IHNWTIA >Mature_166_residues GAGLPPAPIFHFTTLLSDMTLHFEVISRFQAAANADALLYTPLNAGLTFRRSRVYTVEITGDEQKAREYLLSVLVDPISQ ECTEQNAPILKGALFTIDYGMKAGALDLEKEAILQNYRGRRNMGFTMDGLKITQRVYVFGQGDKETLAARFAKDVCNPAI HNWTIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18561; Mature: 18429
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAGLPPAPIFHFTTLLSDMTLHFEVISRFQAAANADALLYTPLNAGLTFRRSRVYTVEI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCEEEEEEE TGDEQKAREYLLSVLVDPISQECTEQNAPILKGALFTIDYGMKAGALDLEKEAILQNYRG ECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHEEEEEECCCCCCCCCHHHHHHHHHCCC RRNMGFTMDGLKITQRVYVFGQGDKETLAARFAKDVCNPAIHNWTIA CCCCCEEECCEEEEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure GAGLPPAPIFHFTTLLSDMTLHFEVISRFQAAANADALLYTPLNAGLTFRRSRVYTVEI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCEEEEEEE TGDEQKAREYLLSVLVDPISQECTEQNAPILKGALFTIDYGMKAGALDLEKEAILQNYRG ECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHEEEEEECCCCCCCCCHHHHHHHHHCCC RRNMGFTMDGLKITQRVYVFGQGDKETLAARFAKDVCNPAIHNWTIA CCCCCEEECCEEEEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA