| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is purL [H]
Identifier: 187735041
GI number: 187735041
Start: 628360
End: 630762
Strand: Direct
Name: purL [H]
Synonym: Amuc_0534
Alternate gene names: 187735041
Gene position: 628360-630762 (Clockwise)
Preceding gene: 187735040
Following gene: 187735042
Centisome position: 23.59
GC content: 60.55
Gene sequence:
>2403_bases ATGTCCGCCAAAACCTACCGAACCGTTCCCGTGAGGAACCTGAGCAGCGACGAACTGCTTGAGCTCAGCAAGAAACAGAA GCTTTCCCTGTCCCGTGAAGACATGGAAGTCGTCCAGCAGATTTTCCGGGAAATCGACCGCGACCCCACTGACGTGGAAC TGGAAGTAATCGCCCAGACGTGGTCGGAACACTGCAAACACCGCATCTTCTCCGCCTCCATCAGCCACAGCGTCAACGGC GGCGCACCGGAGACGGTGAACAGCCTGTTCAAGACCTACATCAAGAAGCCTTCCGAAAAGATCATGGAACGCAAACCGGG CTTCGTGCTCAGCGCGTTTGACGACAATGCCGGCTTCATCGCCCTGGACGACAACCTGGCCGTCTGCCTGAAGGCGGAAA CGCACAACCACCCCTCCGCCATTGAACCGTACGCGGGGGCCAACACCGGGCTGGGCGGCGTTATCCGCGACATCCTGGGC GCAGGCAAGGGTGCCAAGCCCATCGCCTCCCTGGATGTCTTCTGCTTCGGCGCTCCGGACACGAATCCGGCAGACATCAC CGCCCCGGACGTCATCCACCCCCTGGGCATCATGCGCGGCGTGGTGCGCGGCGTGCGCGACTACGGCAACCGCATGGGCA TTCCCACCGTCAACGGCGCCATCCAGTTTGACCCCACGTACATTTACAACCCCCTCGTCTTCTGCGGCACCGCCGGCGTG ATTCCGCGCGGCGACATCCTGAAGGAAATGCGTCCCGGCCTCAAGGTCATCGTCATCGGCGGGCGCACGGGACGGGACGG CCTCAAGGGAGCCACGTTCTCTTCCGCCGCTCTGGATGAAGCCTCCCATGAGGAAGACTTCACCGCCGTGCAAATCGGTA ACCCGATTGAAGAGAAGAAAACGCTGGACTTCATTCTGGAAGCGCGCGAACGCGGCCTCATCGTCTTTATTACGGACTGC GGCGCCGGCGGCTTCTCTTCCGCCGCCGGGGAAATGCTCTCCGTCACGGGCGGTGAAATTTTCCTGGACAACGCCCCTCT CAAGGAACCGGGCCTCATCTCCTGGGAAATCTTCCTGTCGGAATCCCAGGAACGCATGGTTATGGCCGTGGAGGAAAAAG ACCTTCCGGAACTCCGGAAGCTGGCAGACACCTTCCAGACGGAACTGACCGTCCTAGGCCATTCCGACGATACGGGAATC CTGAAGGTCTGGCACAAGGGGGAACTCGTCTGCTGCCTGGACAACTCCAAGCTGCATGACGCCCCCATCAAGAAGCTGGA ATCCGTATTCACTCCCGGCAAGGCGCTCACGGGCCAGCCCCTCCCGGACAAGGATCTGAATAAATCCCTGGAAACCGTGA TGGGGGATTTCGCCATCGTTTCCCGGGAACCCATCATCCGCGAGTATGACCACGAGGTGCAGGGCAACACCATCCTGAAG CCTCTGGCGGGCGCCCAGGCGGACGCTCCGCAGGACGGCTCCGTGGTGGATATCGACGGCTCGGACAAATGCATGGCCAT GGCTTGCGCCATTCTTCCGGAATGGGGCAAAACGGATCCCTACGCCATGGGTACCGGCACCGTGGATGAATGTGTGCGCC AGCTCATCCTGGTTGGCTCCAACCCGGACAAAATCGGCCTGCTGGACAACTTCTGCATGGGTAATCCGGAAGATCCGGCG GAACTCGGCCGCCTGGTGGAATGCGTGAAAGCCATCGCCAAGGCGGCGGACGCGTACAATGCCCCCTTCATTTCCGGCAA GGACTCCTTCTACAACTATTTTGAAACGGAAGACGGCCCTATCAACGTGCCCGTCACCTTCCTCTGCTCCGGCTTTGGTG TGGTGGAAAACCCGGACCACGTCATCGGTTCTTCCCTGAGGCGGAGCAACAGCCTGCTGTACCTCATCGGCCATACGGAA GATGAAATGGGCGGTTCCGTCTTCGCCCGCACCCACGGGGTGGAAGACGGCAAGGTTCCCCAGACGGACTGCGCCGCGAA CATGGAACTGTACAAAGCCTACTACGGCGCCCTGACTTCCGGTCTGGTGCTCTCCGCCCATGACGTTTCCGAAGGCGGCC TGGCCGTCACGGCGGCGGAAATGGCCTTTTCCGGCAAGGGAGGCGTTCGGCTGGATCTCACGAAAGTACCGACCGTCAAC GGCTGGAAATCCCCCGCAGTGCCTCTGTTCAGTGAAAGCACGGGCCGCATCCTTGTGGAGGTGGATCCGGAATTCGCCGC GGATTTTGAAACGGCTATGGACGGCTTCCCCTGCGCCTGCATCGGCGGTGTTACGGAGGAAAAGCGTCTCACGGCCACCT GCTGCGGCGGAGAAAAGGTGCTGGATTGCGACATAGCCAACCTCAAAAAACTCTGGAAGGACGGACTTACCCCCTATTAT TGA
Upstream 100 bases:
>100_bases GGGAGACAAGGAAACCCTGGCGGCGCGCTTTGCCAAGGACGTCTGCAACCCCGCCATTCACAACTGGACCATCGCCTAAC CCTTTTCCTTTCCCATCCAC
Downstream 100 bases:
>100_bases CCTCCTGAAACCGGCATCTTATCAAACCATCGATTTATTTCTACCAATATGCCTCACGCACTTTTACTGAAATACCCCGG CACCAACTGCGATGTGGAAA
Product: phosphoribosylformylglycinamidine synthase II
Products: NA
Alternate protein names: Phosphoribosylformylglycinamidine synthase II; FGAM synthase II [H]
Number of amino acids: Translated: 800; Mature: 799
Protein sequence:
>800_residues MSAKTYRTVPVRNLSSDELLELSKKQKLSLSREDMEVVQQIFREIDRDPTDVELEVIAQTWSEHCKHRIFSASISHSVNG GAPETVNSLFKTYIKKPSEKIMERKPGFVLSAFDDNAGFIALDDNLAVCLKAETHNHPSAIEPYAGANTGLGGVIRDILG AGKGAKPIASLDVFCFGAPDTNPADITAPDVIHPLGIMRGVVRGVRDYGNRMGIPTVNGAIQFDPTYIYNPLVFCGTAGV IPRGDILKEMRPGLKVIVIGGRTGRDGLKGATFSSAALDEASHEEDFTAVQIGNPIEEKKTLDFILEARERGLIVFITDC GAGGFSSAAGEMLSVTGGEIFLDNAPLKEPGLISWEIFLSESQERMVMAVEEKDLPELRKLADTFQTELTVLGHSDDTGI LKVWHKGELVCCLDNSKLHDAPIKKLESVFTPGKALTGQPLPDKDLNKSLETVMGDFAIVSREPIIREYDHEVQGNTILK PLAGAQADAPQDGSVVDIDGSDKCMAMACAILPEWGKTDPYAMGTGTVDECVRQLILVGSNPDKIGLLDNFCMGNPEDPA ELGRLVECVKAIAKAADAYNAPFISGKDSFYNYFETEDGPINVPVTFLCSGFGVVENPDHVIGSSLRRSNSLLYLIGHTE DEMGGSVFARTHGVEDGKVPQTDCAANMELYKAYYGALTSGLVLSAHDVSEGGLAVTAAEMAFSGKGGVRLDLTKVPTVN GWKSPAVPLFSESTGRILVEVDPEFAADFETAMDGFPCACIGGVTEEKRLTATCCGGEKVLDCDIANLKKLWKDGLTPYY
Sequences:
>Translated_800_residues MSAKTYRTVPVRNLSSDELLELSKKQKLSLSREDMEVVQQIFREIDRDPTDVELEVIAQTWSEHCKHRIFSASISHSVNG GAPETVNSLFKTYIKKPSEKIMERKPGFVLSAFDDNAGFIALDDNLAVCLKAETHNHPSAIEPYAGANTGLGGVIRDILG AGKGAKPIASLDVFCFGAPDTNPADITAPDVIHPLGIMRGVVRGVRDYGNRMGIPTVNGAIQFDPTYIYNPLVFCGTAGV IPRGDILKEMRPGLKVIVIGGRTGRDGLKGATFSSAALDEASHEEDFTAVQIGNPIEEKKTLDFILEARERGLIVFITDC GAGGFSSAAGEMLSVTGGEIFLDNAPLKEPGLISWEIFLSESQERMVMAVEEKDLPELRKLADTFQTELTVLGHSDDTGI LKVWHKGELVCCLDNSKLHDAPIKKLESVFTPGKALTGQPLPDKDLNKSLETVMGDFAIVSREPIIREYDHEVQGNTILK PLAGAQADAPQDGSVVDIDGSDKCMAMACAILPEWGKTDPYAMGTGTVDECVRQLILVGSNPDKIGLLDNFCMGNPEDPA ELGRLVECVKAIAKAADAYNAPFISGKDSFYNYFETEDGPINVPVTFLCSGFGVVENPDHVIGSSLRRSNSLLYLIGHTE DEMGGSVFARTHGVEDGKVPQTDCAANMELYKAYYGALTSGLVLSAHDVSEGGLAVTAAEMAFSGKGGVRLDLTKVPTVN GWKSPAVPLFSESTGRILVEVDPEFAADFETAMDGFPCACIGGVTEEKRLTATCCGGEKVLDCDIANLKKLWKDGLTPYY >Mature_799_residues SAKTYRTVPVRNLSSDELLELSKKQKLSLSREDMEVVQQIFREIDRDPTDVELEVIAQTWSEHCKHRIFSASISHSVNGG APETVNSLFKTYIKKPSEKIMERKPGFVLSAFDDNAGFIALDDNLAVCLKAETHNHPSAIEPYAGANTGLGGVIRDILGA GKGAKPIASLDVFCFGAPDTNPADITAPDVIHPLGIMRGVVRGVRDYGNRMGIPTVNGAIQFDPTYIYNPLVFCGTAGVI PRGDILKEMRPGLKVIVIGGRTGRDGLKGATFSSAALDEASHEEDFTAVQIGNPIEEKKTLDFILEARERGLIVFITDCG AGGFSSAAGEMLSVTGGEIFLDNAPLKEPGLISWEIFLSESQERMVMAVEEKDLPELRKLADTFQTELTVLGHSDDTGIL KVWHKGELVCCLDNSKLHDAPIKKLESVFTPGKALTGQPLPDKDLNKSLETVMGDFAIVSREPIIREYDHEVQGNTILKP LAGAQADAPQDGSVVDIDGSDKCMAMACAILPEWGKTDPYAMGTGTVDECVRQLILVGSNPDKIGLLDNFCMGNPEDPAE LGRLVECVKAIAKAADAYNAPFISGKDSFYNYFETEDGPINVPVTFLCSGFGVVENPDHVIGSSLRRSNSLLYLIGHTED EMGGSVFARTHGVEDGKVPQTDCAANMELYKAYYGALTSGLVLSAHDVSEGGLAVTAAEMAFSGKGGVRLDLTKVPTVNG WKSPAVPLFSESTGRILVEVDPEFAADFETAMDGFPCACIGGVTEEKRLTATCCGGEKVLDCDIANLKKLWKDGLTPYY
Specific function: Unknown
COG id: COG0046
COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGAMS family [H]
Homologues:
Organism=Homo sapiens, GI31657129, Length=858, Percent_Identity=24.7086247086247, Blast_Score=173, Evalue=6e-43, Organism=Escherichia coli, GI48994899, Length=773, Percent_Identity=27.2962483829237, Blast_Score=205, Evalue=1e-53, Organism=Caenorhabditis elegans, GI17553022, Length=817, Percent_Identity=25.5813953488372, Blast_Score=161, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6321498, Length=796, Percent_Identity=25.8793969849246, Blast_Score=174, Evalue=4e-44, Organism=Drosophila melanogaster, GI24582111, Length=884, Percent_Identity=25.2262443438914, Blast_Score=175, Evalue=1e-43, Organism=Drosophila melanogaster, GI24582109, Length=884, Percent_Identity=25.2262443438914, Blast_Score=175, Evalue=1e-43, Organism=Drosophila melanogaster, GI17137292, Length=884, Percent_Identity=25.2262443438914, Blast_Score=175, Evalue=1e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR010074 - InterPro: IPR016188 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =6.3.5.3 [H]
Molecular weight: Translated: 86148; Mature: 86017
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAKTYRTVPVRNLSSDELLELSKKQKLSLSREDMEVVQQIFREIDRDPTDVELEVIAQT CCCCCEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHH WSEHCKHRIFSASISHSVNGGAPETVNSLFKTYIKKPSEKIMERKPGFVLSAFDDNAGFI HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCCEE ALDDNLAVCLKAETHNHPSAIEPYAGANTGLGGVIRDILGAGKGAKPIASLDVFCFGAPD EECCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCC TNPADITAPDVIHPLGIMRGVVRGVRDYGNRMGIPTVNGAIQFDPTYIYNPLVFCGTAGV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHEECCCCC IPRGDILKEMRPGLKVIVIGGRTGRDGLKGATFSSAALDEASHEEDFTAVQIGNPIEEKK CCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEECCCCHHHHH TLDFILEARERGLIVFITDCGAGGFSSAAGEMLSVTGGEIFLDNAPLKEPGLISWEIFLS HHHHHHHHHHCCEEEEEEECCCCCCCHHCCCEEEECCCEEEECCCCCCCCCEEEEEEEEC ESQERMVMAVEEKDLPELRKLADTFQTELTVLGHSDDTGILKVWHKGELVCCLDNSKLHD CCCCEEEEEECCCCCHHHHHHHHHHHHEEEEEECCCCCCEEEEEECCCEEEEECCCCCCH APIKKLESVFTPGKALTGQPLPDKDLNKSLETVMGDFAIVSREPIIREYDHEVQGNTILK HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCHHHHHCCCCCCCEEEC PLAGAQADAPQDGSVVDIDGSDKCMAMACAILPEWGKTDPYAMGTGTVDECVRQLILVGS CCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHEEECC NPDKIGLLDNFCMGNPEDPAELGRLVECVKAIAKAADAYNAPFISGKDSFYNYFETEDGP CCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHCCCCCCC INVPVTFLCSGFGVVENPDHVIGSSLRRSNSLLYLIGHTEDEMGGSVFARTHGVEDGKVP CCCCHHEEECCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCC QTDCAANMELYKAYYGALTSGLVLSAHDVSEGGLAVTAAEMAFSGKGGVRLDLTKVPTVN CHHHHCCHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEHHEECCCCCEEEEEEECCCCC GWKSPAVPLFSESTGRILVEVDPEFAADFETAMDGFPCACIGGVTEEKRLTATCCGGEKV CCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCEEEEEECCCCEE LDCDIANLKKLWKDGLTPYY EECCHHHHHHHHHCCCCCCC >Mature Secondary Structure SAKTYRTVPVRNLSSDELLELSKKQKLSLSREDMEVVQQIFREIDRDPTDVELEVIAQT CCCCEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHH WSEHCKHRIFSASISHSVNGGAPETVNSLFKTYIKKPSEKIMERKPGFVLSAFDDNAGFI HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCCEE ALDDNLAVCLKAETHNHPSAIEPYAGANTGLGGVIRDILGAGKGAKPIASLDVFCFGAPD EECCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCC TNPADITAPDVIHPLGIMRGVVRGVRDYGNRMGIPTVNGAIQFDPTYIYNPLVFCGTAGV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHEECCCCC IPRGDILKEMRPGLKVIVIGGRTGRDGLKGATFSSAALDEASHEEDFTAVQIGNPIEEKK CCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEECCCCHHHHH TLDFILEARERGLIVFITDCGAGGFSSAAGEMLSVTGGEIFLDNAPLKEPGLISWEIFLS HHHHHHHHHHCCEEEEEEECCCCCCCHHCCCEEEECCCEEEECCCCCCCCCEEEEEEEEC ESQERMVMAVEEKDLPELRKLADTFQTELTVLGHSDDTGILKVWHKGELVCCLDNSKLHD CCCCEEEEEECCCCCHHHHHHHHHHHHEEEEEECCCCCCEEEEEECCCEEEEECCCCCCH APIKKLESVFTPGKALTGQPLPDKDLNKSLETVMGDFAIVSREPIIREYDHEVQGNTILK HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCHHHHHCCCCCCCEEEC PLAGAQADAPQDGSVVDIDGSDKCMAMACAILPEWGKTDPYAMGTGTVDECVRQLILVGS CCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHEEECC NPDKIGLLDNFCMGNPEDPAELGRLVECVKAIAKAADAYNAPFISGKDSFYNYFETEDGP CCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHCCCCCCC INVPVTFLCSGFGVVENPDHVIGSSLRRSNSLLYLIGHTEDEMGGSVFARTHGVEDGKVP CCCCHHEEECCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCC QTDCAANMELYKAYYGALTSGLVLSAHDVSEGGLAVTAAEMAFSGKGGVRLDLTKVPTVN CHHHHCCHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEHHEECCCCCEEEEEEECCCCC GWKSPAVPLFSESTGRILVEVDPEFAADFETAMDGFPCACIGGVTEEKRLTATCCGGEKV CCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCEEEEEECCCCEE LDCDIANLKKLWKDGLTPYY EECCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]