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The map label for this gene is ftsY [H]

Identifier: 187734932

GI number: 187734932

Start: 508470

End: 509318

Strand: Direct

Name: ftsY [H]

Synonym: Amuc_0425

Alternate gene names: 187734932

Gene position: 508470-509318 (Clockwise)

Preceding gene: 187734931

Following gene: 187734933

Centisome position: 19.09

GC content: 58.78

Gene sequence:

>849_bases
ATGGCAGGATTCTTTAAAAAACTATTCACCAAATTTTCCCGAAGCTCCCGGATAGACTGGGAAGAACTGGAAGCTGAGCT
GGTAGCCGCGGACATCGGCATCAGGCGCGCTATGGGTATTGCGGACCAGTTGAAGGAAAGCAAAGGCCTGGATGCGGAAA
ATCTGGTGGAATCCACCCGTGAAGTGCTTCGCCGGGCCTTTCCTTCCACCGCTCCGTCCCTGCCCGCCCCTCCGGAAGGC
AAACCGCTGGTCATTCTGGTCGTGGGCGTCAACGGCACCGGGAAAACCACTTCTGCGGCCAAATTGGCCCATTTGCTGCA
AAAACAGGGCTCCCGCGTCCTCCTCGCTGCGGCGGACACTTTTCGCGCGGCCGCCGTGGAACAGCTTCAAAGCTGGGCGG
ACAAGCTGAACATCCCCATCTGCAAGGGAGCCCCCAGCCAGGATCCGGCCTCCGTCTGCTATGAGGCCCATACGCAGGCC
ATCAGGGAAGGCTTCCAATACCTCATTTGCGATACCGCGGGGCGCCTCCATACGCGCCACAACCTCATGGAGGAACTCTC
CAAAATTCGCCGGACTCTCGCCAAGCAGGATGCATCCGCCCCCCACAGCACCCTGCTGGTGGTGGATGCCACCACAGGCG
CTAACGCCCTGGCACAAGCCAGGGAATTTCATAAAGCGACGCCCTTGGATTCCGTCATTATCACCAAAATGGACGGTTCC
GGAAAGGGAGGCGTGGCCGTAGCCATCATGGATGAAATGCACATTTCCCCCTCCTTTCTGGGAACCGGGGAAGGAGCCGA
AGACTTTGAACCCTTCAACCGGGACCGCTACGTGGATTCCCTGCTGTAA

Upstream 100 bases:

>100_bases
TGTCGGAACGCTTCTCCTCTGCGGAATCCCCCCGCTTCATCAACGGCGTCCTGGCCGGAATCTCAAAAACGGGACGCCCG
GCATAACTCCGCTTCGCACC

Downstream 100 bases:

>100_bases
CGGGACCTCCTCAAATCCATGCCACCTCTTCCCCTCATCACTGCCCAGACGGAGGAAAAGCTGCTCGCCTTCCTGACGGA
ACACGGGCACACTAAATTCC

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MAGFFKKLFTKFSRSSRIDWEELEAELVAADIGIRRAMGIADQLKESKGLDAENLVESTREVLRRAFPSTAPSLPAPPEG
KPLVILVVGVNGTGKTTSAAKLAHLLQKQGSRVLLAAADTFRAAAVEQLQSWADKLNIPICKGAPSQDPASVCYEAHTQA
IREGFQYLICDTAGRLHTRHNLMEELSKIRRTLAKQDASAPHSTLLVVDATTGANALAQAREFHKATPLDSVIITKMDGS
GKGGVAVAIMDEMHISPSFLGTGEGAEDFEPFNRDRYVDSLL

Sequences:

>Translated_282_residues
MAGFFKKLFTKFSRSSRIDWEELEAELVAADIGIRRAMGIADQLKESKGLDAENLVESTREVLRRAFPSTAPSLPAPPEG
KPLVILVVGVNGTGKTTSAAKLAHLLQKQGSRVLLAAADTFRAAAVEQLQSWADKLNIPICKGAPSQDPASVCYEAHTQA
IREGFQYLICDTAGRLHTRHNLMEELSKIRRTLAKQDASAPHSTLLVVDATTGANALAQAREFHKATPLDSVIITKMDGS
GKGGVAVAIMDEMHISPSFLGTGEGAEDFEPFNRDRYVDSLL
>Mature_281_residues
AGFFKKLFTKFSRSSRIDWEELEAELVAADIGIRRAMGIADQLKESKGLDAENLVESTREVLRRAFPSTAPSLPAPPEGK
PLVILVVGVNGTGKTTSAAKLAHLLQKQGSRVLLAAADTFRAAAVEQLQSWADKLNIPICKGAPSQDPASVCYEAHTQAI
REGFQYLICDTAGRLHTRHNLMEELSKIRRTLAKQDASAPHSTLLVVDATTGANALAQAREFHKATPLDSVIITKMDGSG
KGGVAVAIMDEMHISPSFLGTGEGAEDFEPFNRDRYVDSLL

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TPR repeat [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=271, Percent_Identity=32.4723247232472, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI226371618, Length=236, Percent_Identity=34.7457627118644, Blast_Score=141, Evalue=9e-34,
Organism=Homo sapiens, GI23308697, Length=297, Percent_Identity=29.6296296296296, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI295424842, Length=297, Percent_Identity=29.6296296296296, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI89061728, Length=135, Percent_Identity=34.0740740740741, Blast_Score=81, Evalue=1e-15,
Organism=Escherichia coli, GI1789874, Length=262, Percent_Identity=44.2748091603053, Blast_Score=205, Evalue=3e-54,
Organism=Escherichia coli, GI1788963, Length=211, Percent_Identity=36.4928909952607, Blast_Score=137, Evalue=9e-34,
Organism=Caenorhabditis elegans, GI17539958, Length=288, Percent_Identity=32.2916666666667, Blast_Score=145, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI193206261, Length=227, Percent_Identity=33.920704845815, Blast_Score=104, Evalue=4e-23,
Organism=Saccharomyces cerevisiae, GI6325345, Length=207, Percent_Identity=35.7487922705314, Blast_Score=136, Evalue=4e-33,
Organism=Saccharomyces cerevisiae, GI6320498, Length=235, Percent_Identity=30.6382978723404, Blast_Score=85, Evalue=2e-17,
Organism=Drosophila melanogaster, GI17647949, Length=275, Percent_Identity=34.9090909090909, Blast_Score=152, Evalue=3e-37,
Organism=Drosophila melanogaster, GI24641198, Length=269, Percent_Identity=29.368029739777, Blast_Score=98, Evalue=8e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822
- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N; PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 30468; Mature: 30337

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGFFKKLFTKFSRSSRIDWEELEAELVAADIGIRRAMGIADQLKESKGLDAENLVESTR
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
EVLRRAFPSTAPSLPAPPEGKPLVILVVGVNGTGKTTSAAKLAHLLQKQGSRVLLAAADT
HHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECHH
FRAAAVEQLQSWADKLNIPICKGAPSQDPASVCYEAHTQAIREGFQYLICDTAGRLHTRH
HHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHH
NLMEELSKIRRTLAKQDASAPHSTLLVVDATTGANALAQAREFHKATPLDSVIITKMDGS
HHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCC
GKGGVAVAIMDEMHISPSFLGTGEGAEDFEPFNRDRYVDSLL
CCCCEEEEEECCCCCCCCCCCCCCCCHHCCCCCHHHHHHHCC
>Mature Secondary Structure 
AGFFKKLFTKFSRSSRIDWEELEAELVAADIGIRRAMGIADQLKESKGLDAENLVESTR
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
EVLRRAFPSTAPSLPAPPEGKPLVILVVGVNGTGKTTSAAKLAHLLQKQGSRVLLAAADT
HHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECHH
FRAAAVEQLQSWADKLNIPICKGAPSQDPASVCYEAHTQAIREGFQYLICDTAGRLHTRH
HHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHH
NLMEELSKIRRTLAKQDASAPHSTLLVVDATTGANALAQAREFHKATPLDSVIITKMDGS
HHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCC
GKGGVAVAIMDEMHISPSFLGTGEGAEDFEPFNRDRYVDSLL
CCCCEEEEEECCCCCCCCCCCCCCCCHHCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]