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The map label for this gene is nusB [H]

Identifier: 187734931

GI number: 187734931

Start: 507571

End: 508455

Strand: Direct

Name: nusB [H]

Synonym: Amuc_0424

Alternate gene names: 187734931

Gene position: 507571-508455 (Clockwise)

Preceding gene: 187734930

Following gene: 187734932

Centisome position: 19.05

GC content: 60.79

Gene sequence:

>885_bases
ATGCTCTCACGCAACCAAATCAGACAAGCCGCCCTCCAATACCTTTACGCCGCCTCTCAGACGCCGGAAACGGAACGGGA
GGGAATCTGGGACATCCTGATGGAACCTTTCCGGGGCGACTACTGCAAACTCAAGGCCAAGGCCGTCTCCGGCCATCTTA
CACGGGACTATCCGGACAAGCTGCGCCTCTTCATCACCCGTGCGCGGGAAACGGCGGACAAACTTCAGCAAGACCCCCTT
ACCCTGCCCGTCCGTGACCAGCTTCAGGACCTGCTGGCCAAGGAAGGAGAATTCAACGCCTCCCTGCTCCGGCTGAAAAA
AGCCCTGCACGAGGATCCCTCCAATGACAGGGGGTCTCTTTCCGCCGCCTGCGACGCCGCTCAGGGACTCAATACCGCAC
TGATGCAGATGCGCCGCCGCCTGCTGGACACGCTCAAGGACTTCCCTGCCTATAACGCAATCTGGCCCTCCCTCATTTCC
TCCTGCAGCAAACTCCAGGAAATCAATGACCGCATCAACTGCCTCATTCACCCGGACGACCGCCCCTCCCTGGCGGAAAT
AAAAAAAGTGGTGGAGGCAGGGAGGGATGCGGAGGAACTCTACCGGGAAGCCAAAACCCTGGGAGAAGACATCCTGCGCC
GCCGGGACGGGCTGGACGCCGCCATCGACTCCACCCTGGAAAACTACTCCCCTGAACGTGTCAGCGCCATTGACCGCGCC
ATTCTGCGCCTGGGGGCCTATGAACTCCTCCATCGCAAAGACCTCCCGGCCCCCATCGTCATCTCGGAGGCCATCCGCCT
GTCGGAACGCTTCTCCTCTGCGGAATCCCCCCGCTTCATCAACGGCGTCCTGGCCGGAATCTCAAAAACGGGACGCCCGG
CATAA

Upstream 100 bases:

>100_bases
CGCGGCCGTGAAGCGGCCCGCACCGCTGCCCGCATGGCGGAACTCTTCCTCAACTCCCTGCTCCGGCAATAATACCTATT
ACTCTCTCCTCTCTATCGCC

Downstream 100 bases:

>100_bases
CTCCGCTTCGCACCATGGCAGGATTCTTTAAAAAACTATTCACCAAATTTTCCCGAAGCTCCCGGATAGACTGGGAAGAA
CTGGAAGCTGAGCTGGTAGC

Product: NusB antitermination factor

Products: NA

Alternate protein names: Protein nusB [H]

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MLSRNQIRQAALQYLYAASQTPETEREGIWDILMEPFRGDYCKLKAKAVSGHLTRDYPDKLRLFITRARETADKLQQDPL
TLPVRDQLQDLLAKEGEFNASLLRLKKALHEDPSNDRGSLSAACDAAQGLNTALMQMRRRLLDTLKDFPAYNAIWPSLIS
SCSKLQEINDRINCLIHPDDRPSLAEIKKVVEAGRDAEELYREAKTLGEDILRRRDGLDAAIDSTLENYSPERVSAIDRA
ILRLGAYELLHRKDLPAPIVISEAIRLSERFSSAESPRFINGVLAGISKTGRPA

Sequences:

>Translated_294_residues
MLSRNQIRQAALQYLYAASQTPETEREGIWDILMEPFRGDYCKLKAKAVSGHLTRDYPDKLRLFITRARETADKLQQDPL
TLPVRDQLQDLLAKEGEFNASLLRLKKALHEDPSNDRGSLSAACDAAQGLNTALMQMRRRLLDTLKDFPAYNAIWPSLIS
SCSKLQEINDRINCLIHPDDRPSLAEIKKVVEAGRDAEELYREAKTLGEDILRRRDGLDAAIDSTLENYSPERVSAIDRA
ILRLGAYELLHRKDLPAPIVISEAIRLSERFSSAESPRFINGVLAGISKTGRPA
>Mature_294_residues
MLSRNQIRQAALQYLYAASQTPETEREGIWDILMEPFRGDYCKLKAKAVSGHLTRDYPDKLRLFITRARETADKLQQDPL
TLPVRDQLQDLLAKEGEFNASLLRLKKALHEDPSNDRGSLSAACDAAQGLNTALMQMRRRLLDTLKDFPAYNAIWPSLIS
SCSKLQEINDRINCLIHPDDRPSLAEIKKVVEAGRDAEELYREAKTLGEDILRRRDGLDAAIDSTLENYSPERVSAIDRA
ILRLGAYELLHRKDLPAPIVISEAIRLSERFSSAESPRFINGVLAGISKTGRPA

Specific function: Involved in the transcription termination process [H]

COG id: COG0781

COG function: function code K; Transcription termination factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nusB family [H]

Homologues:

None

Paralogues:

None

Copy number: 900 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011605
- InterPro:   IPR006027 [H]

Pfam domain/function: PF01029 NusB [H]

EC number: NA

Molecular weight: Translated: 33096; Mature: 33096

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSRNQIRQAALQYLYAASQTPETEREGIWDILMEPFRGDYCKLKAKAVSGHLTRDYPDK
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHH
LRLFITRARETADKLQQDPLTLPVRDQLQDLLAKEGEFNASLLRLKKALHEDPSNDRGSL
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCH
SAACDAAQGLNTALMQMRRRLLDTLKDFPAYNAIWPSLISSCSKLQEINDRINCLIHPDD
HHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCC
RPSLAEIKKVVEAGRDAEELYREAKTLGEDILRRRDGLDAAIDSTLENYSPERVSAIDRA
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHH
ILRLGAYELLHRKDLPAPIVISEAIRLSERFSSAESPRFINGVLAGISKTGRPA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLSRNQIRQAALQYLYAASQTPETEREGIWDILMEPFRGDYCKLKAKAVSGHLTRDYPDK
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHH
LRLFITRARETADKLQQDPLTLPVRDQLQDLLAKEGEFNASLLRLKKALHEDPSNDRGSL
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCH
SAACDAAQGLNTALMQMRRRLLDTLKDFPAYNAIWPSLISSCSKLQEINDRINCLIHPDD
HHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCC
RPSLAEIKKVVEAGRDAEELYREAKTLGEDILRRRDGLDAAIDSTLENYSPERVSAIDRA
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHH
ILRLGAYELLHRKDLPAPIVISEAIRLSERFSSAESPRFINGVLAGISKTGRPA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA