Click here to switch to the map view.

The map label for this gene is dsbE [C]

Identifier: 187734772

GI number: 187734772

Start: 322549

End: 324741

Strand: Reverse

Name: dsbE [C]

Synonym: Amuc_0260

Alternate gene names: 187734772

Gene position: 324741-322549 (Counterclockwise)

Preceding gene: 187734775

Following gene: 187734771

Centisome position: 12.19

GC content: 47.93

Gene sequence:

>2193_bases
ATGTTAAATTCCTCTCTGTTGGTTTTAGGGTGTTCCATGATCTTTGCGGTGTCTGCCGGAATGCCATTGCACGCAGCTTC
TTCTGAGAAAAAGGAAAACAAAACGGTTGCTTCGGAGGATGCCCTTCCATCACTTGCTCTGGATGGTTTGCCGGATGTAT
GGATACAGGGAACTCCGGTAAAGGAATGGGAAAAGGACAAAGTGTACATTTTTGAATTTTGGGCTACCTGGTGTGGCCCG
TGCCTGGCTGCTATGCCCCATATGGAACAATTGCATCAGGCATTTAAGAATAATCCTCATATGCAGGTTATCGGAGTTAA
CGTCATGGACAGGAAATCTCCGGAATCTCTGAAAGAATTTTTAAAAAACCGTCCATCGCCCCTTACTTATGCCATGGCCG
TGGATGTGGATGGGAAAAAAACCAGGGATAAATGGCTGTCTCCAATGGGGGTTAACGGCATCCCCCATGCTTTTGCCGTT
AAAAACGGCAAGCTTATTTGGAGAGGGCATCCTGGAAAACTTTCTGAAGAAATGATGCGGGCCATGTTGAAGCCTGATTT
TTCTGCAGCATCTCTTCCGGGGGATAATCCCGGCGCAAACGCCCGTGCATGGAAGCTCTACCGCCAGGTTTCTGAGAGAA
CGGGAGAGCTTGCCCGGAAGGGAGGAAAGGGGGAAGCGCAGGCCTTTTTAAGGCAAATTCAGGATTCGGGACAGTTTCAG
CAGGATCAGATCATTCAACTGAAAATGGTTCCATTCAGAGTCTTGGCGGAATTGGAAAAATTCCAGGAAGCACAGGCCGT
ACTGGATGACCTGTGCAAAGAGTATCCGGACAATTACCGTGTACAGATTGATGTGGCGGGAACGCTTCTAAATGGAAAAT
CCGTGCCTGCCGGAAAAATGGATGCCGCCCTGGTGGAAAGATGTCTGAACCGTTGTATTGAAATCTCCAGAAGGAATAAC
AAGGAAGCTTCCTTGCCATGGAAACTGATGGCGGAACTTAGGGAACGGCAGGGAAATATGGAAGAAGCGTTGCAGGATAT
GGAAAAGGCGCTTTCCTTAACGTCCATCAGCAAAGCCTGGACGAAGTTGCAGCAGCTTTCAGGCAATAAGGAATCCTTTC
AGAATCTTGTAAATCAGGCGGTTGCTGAAATAAAACCGGAACCTCCGAGGAAGATGCAGGAAATGGGAGTAGTGCAGGAA
GACAAACAGTACACTCCCCTGTTCAGCAAATTAAAATGGTTCAATCATCCCGGTCTAACAGGACTTCCTGTCGGCAAAAC
CGTATTCATCAGCTTCTGGAGAGGCCACAATAATATACTTGGAGAAACAGCTCCTGGAAGAGCTCTTGATGCCGTTCTTA
AAAAACACGGGCTCTTAGACCATCCGGGAGTAAAAGCCGTGGTATTGGGGCTCAATCCGTCGGCGGAAAAACAGATGCGG
GACTATTTATCCGGGCCGGAAGGATGGACTCCTTATCCTGTCGGTATTCCATCGGATCGTTCGGTCATTGAATTTTGTGA
TTTGCTCAAACTTGACTCATTTCCCGCCGCGGTCGTCGTTCGTGACGGAACATTGCTGTGGGCTGGAGAAATTAAGAAGA
TGCCCGAATGGGTGGCGGAAACTGCCAGATTGGACTCTTTTGACAAAAACAGGTTTGCGGAAGAAGATGCGAAACGGAAG
GCCCGCCAGCAGGCCATGTATGCTGTCATAAAAAAATCCTTTGAATTGAGGCGGGAAAAGAAATTTGATGAATACCAGAA
GTTGATTGAGGAAAATGCAGGGCAGTTTTCCGATAACGGATGGTTTGCGTCTACTGTGGCGGAAGTGCGGGCGGAAAAGG
CTTGGAAGGAGAAAAATTATCGGAAAATGGTTGATATCTTTGACCACGTCTTGGAGCGTTTCCCCCGGGAAGATTCGCTT
GCTTCCTATATCCTGAAAATCCTTAACGGCTCGGAGGAAATGCGTAAATACAGCTATAAGGCGGCTCGGCGCGCTCTCCA
GATTATGAGGGATTCTAATACGAAGGATGATGGCGGATACAATGCCGCCTGCTATGAAGTGATGATGAATATGGCAATGG
AGAAAAAAGATTATGACCAGGCAAGGAAGGATGCTGCAAACGCCCTCCGGGAACTGCCTCTGGTTCATCAATACGCAGTC
ATGAAGAAAAAGAGTGGAGGAGGCAAAAAGTAG

Upstream 100 bases:

>100_bases
CATTTTATTCTGGTGGAAAGAACACGATAACGGCTCTTCTATCTTTCCTTTTCTTTTTCTATTGGCTTGACGCAGAAGGT
TACGATAGTACCGTGTTACC

Downstream 100 bases:

>100_bases
AGAGAAACTTAGGACTTCTGAAACGTTTAGGCCTCTTTCGTGGTGAAAGAGGCTTTTTTATTAGAAAAAAATAAAAATGT
AATACGTTGATAATCAGATA

Product: Redoxin domain protein

Products: NA

Alternate protein names: FixW Protein

Number of amino acids: Translated: 730; Mature: 730

Protein sequence:

>730_residues
MLNSSLLVLGCSMIFAVSAGMPLHAASSEKKENKTVASEDALPSLALDGLPDVWIQGTPVKEWEKDKVYIFEFWATWCGP
CLAAMPHMEQLHQAFKNNPHMQVIGVNVMDRKSPESLKEFLKNRPSPLTYAMAVDVDGKKTRDKWLSPMGVNGIPHAFAV
KNGKLIWRGHPGKLSEEMMRAMLKPDFSAASLPGDNPGANARAWKLYRQVSERTGELARKGGKGEAQAFLRQIQDSGQFQ
QDQIIQLKMVPFRVLAELEKFQEAQAVLDDLCKEYPDNYRVQIDVAGTLLNGKSVPAGKMDAALVERCLNRCIEISRRNN
KEASLPWKLMAELRERQGNMEEALQDMEKALSLTSISKAWTKLQQLSGNKESFQNLVNQAVAEIKPEPPRKMQEMGVVQE
DKQYTPLFSKLKWFNHPGLTGLPVGKTVFISFWRGHNNILGETAPGRALDAVLKKHGLLDHPGVKAVVLGLNPSAEKQMR
DYLSGPEGWTPYPVGIPSDRSVIEFCDLLKLDSFPAAVVVRDGTLLWAGEIKKMPEWVAETARLDSFDKNRFAEEDAKRK
ARQQAMYAVIKKSFELRREKKFDEYQKLIEENAGQFSDNGWFASTVAEVRAEKAWKEKNYRKMVDIFDHVLERFPREDSL
ASYILKILNGSEEMRKYSYKAARRALQIMRDSNTKDDGGYNAACYEVMMNMAMEKKDYDQARKDAANALRELPLVHQYAV
MKKKSGGGKK

Sequences:

>Translated_730_residues
MLNSSLLVLGCSMIFAVSAGMPLHAASSEKKENKTVASEDALPSLALDGLPDVWIQGTPVKEWEKDKVYIFEFWATWCGP
CLAAMPHMEQLHQAFKNNPHMQVIGVNVMDRKSPESLKEFLKNRPSPLTYAMAVDVDGKKTRDKWLSPMGVNGIPHAFAV
KNGKLIWRGHPGKLSEEMMRAMLKPDFSAASLPGDNPGANARAWKLYRQVSERTGELARKGGKGEAQAFLRQIQDSGQFQ
QDQIIQLKMVPFRVLAELEKFQEAQAVLDDLCKEYPDNYRVQIDVAGTLLNGKSVPAGKMDAALVERCLNRCIEISRRNN
KEASLPWKLMAELRERQGNMEEALQDMEKALSLTSISKAWTKLQQLSGNKESFQNLVNQAVAEIKPEPPRKMQEMGVVQE
DKQYTPLFSKLKWFNHPGLTGLPVGKTVFISFWRGHNNILGETAPGRALDAVLKKHGLLDHPGVKAVVLGLNPSAEKQMR
DYLSGPEGWTPYPVGIPSDRSVIEFCDLLKLDSFPAAVVVRDGTLLWAGEIKKMPEWVAETARLDSFDKNRFAEEDAKRK
ARQQAMYAVIKKSFELRREKKFDEYQKLIEENAGQFSDNGWFASTVAEVRAEKAWKEKNYRKMVDIFDHVLERFPREDSL
ASYILKILNGSEEMRKYSYKAARRALQIMRDSNTKDDGGYNAACYEVMMNMAMEKKDYDQARKDAANALRELPLVHQYAV
MKKKSGGGKK
>Mature_730_residues
MLNSSLLVLGCSMIFAVSAGMPLHAASSEKKENKTVASEDALPSLALDGLPDVWIQGTPVKEWEKDKVYIFEFWATWCGP
CLAAMPHMEQLHQAFKNNPHMQVIGVNVMDRKSPESLKEFLKNRPSPLTYAMAVDVDGKKTRDKWLSPMGVNGIPHAFAV
KNGKLIWRGHPGKLSEEMMRAMLKPDFSAASLPGDNPGANARAWKLYRQVSERTGELARKGGKGEAQAFLRQIQDSGQFQ
QDQIIQLKMVPFRVLAELEKFQEAQAVLDDLCKEYPDNYRVQIDVAGTLLNGKSVPAGKMDAALVERCLNRCIEISRRNN
KEASLPWKLMAELRERQGNMEEALQDMEKALSLTSISKAWTKLQQLSGNKESFQNLVNQAVAEIKPEPPRKMQEMGVVQE
DKQYTPLFSKLKWFNHPGLTGLPVGKTVFISFWRGHNNILGETAPGRALDAVLKKHGLLDHPGVKAVVLGLNPSAEKQMR
DYLSGPEGWTPYPVGIPSDRSVIEFCDLLKLDSFPAAVVVRDGTLLWAGEIKKMPEWVAETARLDSFDKNRFAEEDAKRK
ARQQAMYAVIKKSFELRREKKFDEYQKLIEENAGQFSDNGWFASTVAEVRAEKAWKEKNYRKMVDIFDHVLERFPREDSL
ASYILKILNGSEEMRKYSYKAARRALQIMRDSNTKDDGGYNAACYEVMMNMAMEKKDYDQARKDAANALRELPLVHQYAV
MKKKSGGGKK

Specific function: Involved In Disulfide Bond Formation. Catalyzes A Late, Reductive Step In The Assembly Of Periplasmic C-Type Cytochromes, Probably The Reduction Of Disulfide Bonds Of The Apocytochrome C To Allow Covalent Linkage With The Heme. Possible Subunit Of A Heme

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82429; Mature: 82429

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNSSLLVLGCSMIFAVSAGMPLHAASSEKKENKTVASEDALPSLALDGLPDVWIQGTPV
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHCCCHHHHCCCCCCCCCCCCC
KEWEKDKVYIFEFWATWCGPCLAAMPHMEQLHQAFKNNPHMQVIGVNVMDRKSPESLKEF
CCCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEECHHCCCCHHHHHHH
LKNRPSPLTYAMAVDVDGKKTRDKWLSPMGVNGIPHAFAVKNGKLIWRGHPGKLSEEMMR
HHCCCCCEEEEEEEECCCCCCHHHHCCCCCCCCCCCCEEEECCEEEEECCCCCHHHHHHH
AMLKPDFSAASLPGDNPGANARAWKLYRQVSERTGELARKGGKGEAQAFLRQIQDSGQFQ
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
QDQIIQLKMVPFRVLAELEKFQEAQAVLDDLCKEYPDNYRVQIDVAGTLLNGKSVPAGKM
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCHH
DAALVERCLNRCIEISRRNNKEASLPWKLMAELRERQGNMEEALQDMEKALSLTSISKAW
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
TKLQQLSGNKESFQNLVNQAVAEIKPEPPRKMQEMGVVQEDKQYTPLFSKLKWFNHPGLT
HHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCC
GLPVGKTVFISFWRGHNNILGETAPGRALDAVLKKHGLLDHPGVKAVVLGLNPSAEKQMR
CCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHH
DYLSGPEGWTPYPVGIPSDRSVIEFCDLLKLDSFPAAVVVRDGTLLWAGEIKKMPEWVAE
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCEEEHHHHHHHHHHHHH
TARLDSFDKNRFAEEDAKRKARQQAMYAVIKKSFELRREKKFDEYQKLIEENAGQFSDNG
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
WFASTVAEVRAEKAWKEKNYRKMVDIFDHVLERFPREDSLASYILKILNGSEEMRKYSYK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHH
AARRALQIMRDSNTKDDGGYNAACYEVMMNMAMEKKDYDQARKDAANALRELPLVHQYAV
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
MKKKSGGGKK
HHHCCCCCCC
>Mature Secondary Structure
MLNSSLLVLGCSMIFAVSAGMPLHAASSEKKENKTVASEDALPSLALDGLPDVWIQGTPV
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHCCCHHHHCCCCCCCCCCCCC
KEWEKDKVYIFEFWATWCGPCLAAMPHMEQLHQAFKNNPHMQVIGVNVMDRKSPESLKEF
CCCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEECHHCCCCHHHHHHH
LKNRPSPLTYAMAVDVDGKKTRDKWLSPMGVNGIPHAFAVKNGKLIWRGHPGKLSEEMMR
HHCCCCCEEEEEEEECCCCCCHHHHCCCCCCCCCCCCEEEECCEEEEECCCCCHHHHHHH
AMLKPDFSAASLPGDNPGANARAWKLYRQVSERTGELARKGGKGEAQAFLRQIQDSGQFQ
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
QDQIIQLKMVPFRVLAELEKFQEAQAVLDDLCKEYPDNYRVQIDVAGTLLNGKSVPAGKM
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCHH
DAALVERCLNRCIEISRRNNKEASLPWKLMAELRERQGNMEEALQDMEKALSLTSISKAW
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
TKLQQLSGNKESFQNLVNQAVAEIKPEPPRKMQEMGVVQEDKQYTPLFSKLKWFNHPGLT
HHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCC
GLPVGKTVFISFWRGHNNILGETAPGRALDAVLKKHGLLDHPGVKAVVLGLNPSAEKQMR
CCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHH
DYLSGPEGWTPYPVGIPSDRSVIEFCDLLKLDSFPAAVVVRDGTLLWAGEIKKMPEWVAE
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCEEEHHHHHHHHHHHHH
TARLDSFDKNRFAEEDAKRKARQQAMYAVIKKSFELRREKKFDEYQKLIEENAGQFSDNG
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
WFASTVAEVRAEKAWKEKNYRKMVDIFDHVLERFPREDSLASYILKILNGSEEMRKYSYK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHH
AARRALQIMRDSNTKDDGGYNAACYEVMMNMAMEKKDYDQARKDAANALRELPLVHQYAV
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
MKKKSGGGKK
HHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA