| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734771
Identifier: 187734771
GI number: 187734771
Start: 315805
End: 316560
Strand: Reverse
Name: 187734771
Synonym: Amuc_0259
Alternate gene names: NA
Gene position: 316560-315805 (Counterclockwise)
Preceding gene: 187734772
Following gene: 187734770
Centisome position: 11.88
GC content: 49.74
Gene sequence:
>756_bases ATGTGTGGGGTATTGACGGATTACACTCTTTCGTCAGAATGGCGGCATATGAAATCCCAAGTCATTCAGAAACCTGTGGT CGTCATTCTGGGCAACGCCGGCAATATAGGATATTTGGCAGCCAAGGCATTTGCCTGTCAGGGAACTGTGGTTGCCATGC TTCATGAGGCCGGTGAAGAATCTTGCCATATCGTTGATTGTCTTCCGGGCAGCAGCCACCTGGTCATGTCAGGCCGCCTG AACCATTCTTCCGATTTGGCTTCTTTTGCTGGTCTGGTACATACTCTTTATGGACGTGTTGATTATTTGATTATTTGTGA AGATGCCTCAGTCGAGGTGCAGGGACTGAGTTGTTCTTCCCGTGTCCGTCTGTCCGTTTTGCTGGAACATGCCTTTGTTT CTGGGGCCATGATTGTGAATATGGTTTCCCGTTCTGGAAAAAAGGGAGTATGGGTGGAAGATATCGCGGGCTTGGAAAAT TGCCTGAACCGGAGAGATGTCAGAATGAGCCAGATCGTAATTCACCGTCCGGTATTTCGGTATGTTTCCCAGTCTCGATT GGCTTCTTCCGCCTGTGCGGCTGCGTTGTTTTTATGTGGGAACGAAGGTCGCCATATTCACCGGGAATATATCGTGGTCA ATGGAAGGAAAGCTGCCTGGCGGCCCGGCAGGCGGCCGGAATCATTCCTGTCCCTGTTTAATTCCTGCCTGGAGTTTTGC TCCATTTGTTCACGAATGGTATTTCAGGATGCCTGA
Upstream 100 bases:
>100_bases TTCTCCCCCTACATTCTCTTAGTTAGTTTCCTTCTTGTAAGATGTCGTGGCCATATAATTTTTTCTTAACTATTCCTTTT TCTTTCTTAATGACTTAAGT
Downstream 100 bases:
>100_bases CAGGCGTGCCATATTTCTGTATTCTGTCGTGACAAAAAGTGTCTGTTAAGATAGTATATTTCCAAGTAAGGTTATGAAGT TTCAAGGTCTTTATACAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MCGVLTDYTLSSEWRHMKSQVIQKPVVVILGNAGNIGYLAAKAFACQGTVVAMLHEAGEESCHIVDCLPGSSHLVMSGRL NHSSDLASFAGLVHTLYGRVDYLIICEDASVEVQGLSCSSRVRLSVLLEHAFVSGAMIVNMVSRSGKKGVWVEDIAGLEN CLNRRDVRMSQIVIHRPVFRYVSQSRLASSACAAALFLCGNEGRHIHREYIVVNGRKAAWRPGRRPESFLSLFNSCLEFC SICSRMVFQDA
Sequences:
>Translated_251_residues MCGVLTDYTLSSEWRHMKSQVIQKPVVVILGNAGNIGYLAAKAFACQGTVVAMLHEAGEESCHIVDCLPGSSHLVMSGRL NHSSDLASFAGLVHTLYGRVDYLIICEDASVEVQGLSCSSRVRLSVLLEHAFVSGAMIVNMVSRSGKKGVWVEDIAGLEN CLNRRDVRMSQIVIHRPVFRYVSQSRLASSACAAALFLCGNEGRHIHREYIVVNGRKAAWRPGRRPESFLSLFNSCLEFC SICSRMVFQDA >Mature_251_residues MCGVLTDYTLSSEWRHMKSQVIQKPVVVILGNAGNIGYLAAKAFACQGTVVAMLHEAGEESCHIVDCLPGSSHLVMSGRL NHSSDLASFAGLVHTLYGRVDYLIICEDASVEVQGLSCSSRVRLSVLLEHAFVSGAMIVNMVSRSGKKGVWVEDIAGLEN CLNRRDVRMSQIVIHRPVFRYVSQSRLASSACAAALFLCGNEGRHIHREYIVVNGRKAAWRPGRRPESFLSLFNSCLEFC SICSRMVFQDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27567; Mature: 27567
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGVLTDYTLSSEWRHMKSQVIQKPVVVILGNAGNIGYLAAKAFACQGTVVAMLHEAGEE CCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHCCCC SCHIVDCLPGSSHLVMSGRLNHSSDLASFAGLVHTLYGRVDYLIICEDASVEVQGLSCSS CCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCH RVRLSVLLEHAFVSGAMIVNMVSRSGKKGVWVEDIAGLENCLNRRDVRMSQIVIHRPVFR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH YVSQSRLASSACAAALFLCGNEGRHIHREYIVVNGRKAAWRPGRRPESFLSLFNSCLEFC HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH SICSRMVFQDA HHHHHHHHCCC >Mature Secondary Structure MCGVLTDYTLSSEWRHMKSQVIQKPVVVILGNAGNIGYLAAKAFACQGTVVAMLHEAGEE CCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHCCCC SCHIVDCLPGSSHLVMSGRLNHSSDLASFAGLVHTLYGRVDYLIICEDASVEVQGLSCSS CCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCH RVRLSVLLEHAFVSGAMIVNMVSRSGKKGVWVEDIAGLENCLNRRDVRMSQIVIHRPVFR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH YVSQSRLASSACAAALFLCGNEGRHIHREYIVVNGRKAAWRPGRRPESFLSLFNSCLEFC HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH SICSRMVFQDA HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA