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The map label for this gene is 187734775

Identifier: 187734775

GI number: 187734775

Start: 326709

End: 327206

Strand: Reverse

Name: 187734775

Synonym: Amuc_0263

Alternate gene names: NA

Gene position: 327206-326709 (Counterclockwise)

Preceding gene: 187734776

Following gene: 187734772

Centisome position: 12.28

GC content: 51.61

Gene sequence:

>498_bases
ATGAAACCGAATCTTGAACTCTACAATCATTTGGGGGAGGGGAGGCTCAGTTCATCCGTTACGGATGCCCTGATTGGAGC
CTTGGAGAGTTGTCTTCCGTCCGTGTTGGCGTTGCCTGAAGGTCCTGTCCCCGTACTTTCCGGATTGGATGAAGTAGAAA
TCAGCGTGGTTTCCGATGACGTCATCCGGGATGTGCATGCCCGTTTTTTGAATGATCCGACGGCGACGGATGTCATTACT
TTTCCGCATGGAGACGGAATAGGAGAGATCATCGTCAGCTTTGATACCGCTATCCGGCAGGCTTCGGAATTCAGAGAACC
TGTTTTCAGAGAACTTTTCCGGTACATGGTGCATGGTCTTCTGCATCTGCACGGATATATAGATACGGAACCGGAGGAAC
GGGAACGCATGTTTTCTTGTCAGGAGCCTCTGGTGCGGAAGTTTGGAGCGACCCTGGTGGACATACCTTTTACGCATGAC
CGCTGCTCCGGCGCTTAA

Upstream 100 bases:

>100_bases
AAAGCCGTTCCTGAAATCATGGAGTTGCCCGATGCCGGAACCCTTCAAGAGGGAAAATCCACGGAAACGGAGATGAAGAA
CGGAGCGGATGCGGAGGAAA

Downstream 100 bases:

>100_bases
AGCGCGCTTTTCAAAGATCCGGGCTTGCCAAGTTGAGATGAACTCTGTTACTCTTTTGCCGCATCATGCGTCCATAGCTC
AGTTGGATAGAGCAACTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MKPNLELYNHLGEGRLSSSVTDALIGALESCLPSVLALPEGPVPVLSGLDEVEISVVSDDVIRDVHARFLNDPTATDVIT
FPHGDGIGEIIVSFDTAIRQASEFREPVFRELFRYMVHGLLHLHGYIDTEPEERERMFSCQEPLVRKFGATLVDIPFTHD
RCSGA

Sequences:

>Translated_165_residues
MKPNLELYNHLGEGRLSSSVTDALIGALESCLPSVLALPEGPVPVLSGLDEVEISVVSDDVIRDVHARFLNDPTATDVIT
FPHGDGIGEIIVSFDTAIRQASEFREPVFRELFRYMVHGLLHLHGYIDTEPEERERMFSCQEPLVRKFGATLVDIPFTHD
RCSGA
>Mature_165_residues
MKPNLELYNHLGEGRLSSSVTDALIGALESCLPSVLALPEGPVPVLSGLDEVEISVVSDDVIRDVHARFLNDPTATDVIT
FPHGDGIGEIIVSFDTAIRQASEFREPVFRELFRYMVHGLLHLHGYIDTEPEERERMFSCQEPLVRKFGATLVDIPFTHD
RCSGA

Specific function: Involved in rRNA and/or ribosome maturation and assembly. Required for normal 5' and 3' processing of 16S, 23S and 5S rRNAs. May have metal-dependent hydrolase activity [H]

COG id: COG0319

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rRNA maturation factor YbeY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023091
- InterPro:   IPR020549
- InterPro:   IPR002036 [H]

Pfam domain/function: PF02130 UPF0054 [H]

EC number: NA

Molecular weight: Translated: 18288; Mature: 18288

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPNLELYNHLGEGRLSSSVTDALIGALESCLPSVLALPEGPVPVLSGLDEVEISVVSDD
CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHH
VIRDVHARFLNDPTATDVITFPHGDGIGEIIVSFDTAIRQASEFREPVFRELFRYMVHGL
HHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHLHGYIDTEPEERERMFSCQEPLVRKFGATLVDIPFTHDRCSGA
HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCC
>Mature Secondary Structure
MKPNLELYNHLGEGRLSSSVTDALIGALESCLPSVLALPEGPVPVLSGLDEVEISVVSDD
CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHH
VIRDVHARFLNDPTATDVITFPHGDGIGEIIVSFDTAIRQASEFREPVFRELFRYMVHGL
HHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHLHGYIDTEPEERERMFSCQEPLVRKFGATLVDIPFTHDRCSGA
HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA