| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is per1 [H]
Identifier: 187734696
GI number: 187734696
Start: 230995
End: 231915
Strand: Reverse
Name: per1 [H]
Synonym: Amuc_0183
Alternate gene names: 187734696
Gene position: 231915-230995 (Counterclockwise)
Preceding gene: 187734708
Following gene: 187734695
Centisome position: 8.71
GC content: 55.92
Gene sequence:
>921_bases ATGACTTCCACCGGTGTTTATCTATGCGGTTGCATCATGTTCTTTTGCGTTTTTTCTCAGGGGGCCACGTCTTCTCCGCC AGCCGTTTCCGCAGCGGATTCCTCCGCCGTACGCGAACTGGCCCATTCCCTGAAGGCCCGTGTGGGCATGGCTGCGGAAA TGCTGGATACGGGGGAAACCGTCATGGTGGGGGATGAGGCGGCCTATCCCATGCAGAGCGTCGTCAAATTCGTGCTGGCC TTGTCCGTCTTGAAGCGGGTGGACCAGGGCGCCATGAATCTGGAACAGATCATCCGCATACGTCCGGAACAACTGGTGAA AGATACCTGGAGCCCCCTCCGGGAGCGTTTCCCGCAAGGCGGCGATTTCTCTCTGAAGGAACTGCTGAGAGTGACTGTCC AGGAAAGCGACAACAATACCTGCGACCTCCTGTTTGGCCTTATTGGAGGGCCGCAGGCCGTGCAGAAGGATTTGAAGGAA TGGGGAATTGACGGCATTAATGTCCGTTTTACGGAAGAAGAAATACACCGGAATCATGATTTGCAATATGTCAACTCAAG CCGTCCGTCGGCCATGAACTCCCTTCTCCGGGCGTTTGACGAAGGTAAAATTTTGAAAAAAGGCACACAGAGTGTTCTTT GGAACATCATGGCGGGATGTTCTACAGGTCCTGAACGTCTGAAAGGGCAGCTGCCGCGGGATTACGTGGTGGCGCATAAG ACGGGATCCGGATTCACGCTGCCGGGGGGTGGCGTTACCGCCCGCAATGACGTCGGCATCATTGTTCTTCCCAACGGCCG GAAAATGGCGGTTTCCGTGTTCATCAGGGATTCAAAGGATTCTGAATCCGCTTGTGACCGGGTGATCGCCTCCATGGCCC GCTGGCTGTGCCTGGAATGGCTGGGTGCCGGAGGCAGGTAA
Upstream 100 bases:
>100_bases GGTGGCAAGGTTTCTGCCCGGCTTGCGGATGACGAAGAAAGGAAAAAAGGGGGAGAAATTATTATTGCGGTTGCTGCGGG CGTGATATGGAATGGCGCCT
Downstream 100 bases:
>100_bases ACGATCTCCTTCCCCGGAACATGTTTTAGGCTTGGAAAGGGGAGCGGGATCAGGCAAGGTGTGCCGCGTTATTCATGAAG AACCTATTGAGCCGGTACAT
Product: Beta-lactamase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MTSTGVYLCGCIMFFCVFSQGATSSPPAVSAADSSAVRELAHSLKARVGMAAEMLDTGETVMVGDEAAYPMQSVVKFVLA LSVLKRVDQGAMNLEQIIRIRPEQLVKDTWSPLRERFPQGGDFSLKELLRVTVQESDNNTCDLLFGLIGGPQAVQKDLKE WGIDGINVRFTEEEIHRNHDLQYVNSSRPSAMNSLLRAFDEGKILKKGTQSVLWNIMAGCSTGPERLKGQLPRDYVVAHK TGSGFTLPGGGVTARNDVGIIVLPNGRKMAVSVFIRDSKDSESACDRVIASMARWLCLEWLGAGGR
Sequences:
>Translated_306_residues MTSTGVYLCGCIMFFCVFSQGATSSPPAVSAADSSAVRELAHSLKARVGMAAEMLDTGETVMVGDEAAYPMQSVVKFVLA LSVLKRVDQGAMNLEQIIRIRPEQLVKDTWSPLRERFPQGGDFSLKELLRVTVQESDNNTCDLLFGLIGGPQAVQKDLKE WGIDGINVRFTEEEIHRNHDLQYVNSSRPSAMNSLLRAFDEGKILKKGTQSVLWNIMAGCSTGPERLKGQLPRDYVVAHK TGSGFTLPGGGVTARNDVGIIVLPNGRKMAVSVFIRDSKDSESACDRVIASMARWLCLEWLGAGGR >Mature_305_residues TSTGVYLCGCIMFFCVFSQGATSSPPAVSAADSSAVRELAHSLKARVGMAAEMLDTGETVMVGDEAAYPMQSVVKFVLAL SVLKRVDQGAMNLEQIIRIRPEQLVKDTWSPLRERFPQGGDFSLKELLRVTVQESDNNTCDLLFGLIGGPQAVQKDLKEW GIDGINVRFTEEEIHRNHDLQYVNSSRPSAMNSLLRAFDEGKILKKGTQSVLWNIMAGCSTGPERLKGQLPRDYVVAHKT GSGFTLPGGGVTARNDVGIIVLPNGRKMAVSVFIRDSKDSESACDRVIASMARWLCLEWLGAGGR
Specific function: Unknown
COG id: COG2367
COG function: function code V; Beta-lactamase class A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-A beta-lactamase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 - InterPro: IPR000871 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: =3.5.2.6 [H]
Molecular weight: Translated: 33344; Mature: 33213
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: PS00146 BETA_LACTAMASE_A
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTGVYLCGCIMFFCVFSQGATSSPPAVSAADSSAVRELAHSLKARVGMAAEMLDTGET CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCE VMVGDEAAYPMQSVVKFVLALSVLKRVDQGAMNLEQIIRIRPEQLVKDTWSPLRERFPQG EEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCC GDFSLKELLRVTVQESDNNTCDLLFGLIGGPQAVQKDLKEWGIDGINVRFTEEEIHRNHD CCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEHHHHHCCCC LQYVNSSRPSAMNSLLRAFDEGKILKKGTQSVLWNIMAGCSTGPERLKGQLPRDYVVAHK CEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEEEE TGSGFTLPGGGVTARNDVGIIVLPNGRKMAVSVFIRDSKDSESACDRVIASMARWLCLEW CCCCCCCCCCCCEECCCEEEEEECCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH LGAGGR HCCCCC >Mature Secondary Structure TSTGVYLCGCIMFFCVFSQGATSSPPAVSAADSSAVRELAHSLKARVGMAAEMLDTGET CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCE VMVGDEAAYPMQSVVKFVLALSVLKRVDQGAMNLEQIIRIRPEQLVKDTWSPLRERFPQG EEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCC GDFSLKELLRVTVQESDNNTCDLLFGLIGGPQAVQKDLKEWGIDGINVRFTEEEIHRNHD CCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEHHHHHCCCC LQYVNSSRPSAMNSLLRAFDEGKILKKGTQSVLWNIMAGCSTGPERLKGQLPRDYVVAHK CEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEEEE TGSGFTLPGGGVTARNDVGIIVLPNGRKMAVSVFIRDSKDSESACDRVIASMARWLCLEW CCCCCCCCCCCCEECCCEEEEEECCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH LGAGGR HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8141562 [H]