| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734708
Identifier: 187734708
GI number: 187734708
Start: 245575
End: 245712
Strand: Reverse
Name: 187734708
Synonym: Amuc_0195
Alternate gene names: NA
Gene position: 245712-245575 (Counterclockwise)
Preceding gene: 187734711
Following gene: 187734696
Centisome position: 9.22
GC content: 59.42
Gene sequence:
>138_bases ATGCCCGGATGGAGCGCGCCCTTTTCCGTAACCGGCCAGTCAAATCAGGGCAGCCAGGAACAGGCCGTGATGAGCAGGGA AAATTTCAGTTGTTTCAACCGCGGCGGCATGTTGCCGCAGATGCCCGCGGCAAGGTAA
Upstream 100 bases:
>100_bases GTATTGATTCCCACTCTACCTTAAATTCCCCTACGGAAGCAACTCTATAAGCGGGCATATTTTGATGGCGGGACGCCCTG ATGCTGAACGGACGCCAATC
Downstream 100 bases:
>100_bases ATCCTGTCCGGTTCCTGTTTTTCCCGGAAGCGGCAGGGAGGGCGGATGAACGAGGGCGCTCCAACCGTTAAAGCCGGGAC ATACAGGAACCCGGAAACTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 45; Mature: 44
Protein sequence:
>45_residues MPGWSAPFSVTGQSNQGSQEQAVMSRENFSCFNRGGMLPQMPAAR
Sequences:
>Translated_45_residues MPGWSAPFSVTGQSNQGSQEQAVMSRENFSCFNRGGMLPQMPAAR >Mature_44_residues PGWSAPFSVTGQSNQGSQEQAVMSRENFSCFNRGGMLPQMPAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4877; Mature: 4745
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 8.9 %Met (Translated Protein) 11.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 6.8 %Met (Mature Protein) 9.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGWSAPFSVTGQSNQGSQEQAVMSRENFSCFNRGGMLPQMPAAR CCCCCCCEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PGWSAPFSVTGQSNQGSQEQAVMSRENFSCFNRGGMLPQMPAAR CCCCCCEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA