| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is mutL
Identifier: 187734600
GI number: 187734600
Start: 112700
End: 114601
Strand: Direct
Name: mutL
Synonym: Amuc_0086
Alternate gene names: 187734600
Gene position: 112700-114601 (Clockwise)
Preceding gene: 187734599
Following gene: 187734602
Centisome position: 4.23
GC content: 58.94
Gene sequence:
>1902_bases ATGCCATCCATCCACGTCATGTCTCCCACCCTTGCCAGCCAAGTGGCGGCAGGAGAAGTAGTGGAGCGCCCCGCCTCCGT TGTGAAGGAACTGGTGGAAAACAGCCTGGATGCAGGAGCCAAATTCGTACGGGTGGAAATACGCCGCGGAGGCGTGGGCA TGATCAAGGTGACGGACGACGGCAGCGGCATGTCACGGGCAGACGCCGAGCTGTGCACCAAACGGCACGCCACCAGCAAA CTTTCTTCCCTGGAGGAGCTTTTTGAAATCACACACCTGGGATTCCGCGGAGAGGCTCTGCCCAGCATTGCCAGCGTTTC CCGCTTCAAACTCTGTACCAGGCAGCAGCAGGATCTGGAAGGCTGGGAAATACGCATTGACGGAGGCCTGGAACACGAAC CGAGAAGCTCAGGCGTCTCTCCCGGCACCGCCATTGAGGTGGCCGACTTGTTTTACAATACTCCAGCGCGCCGCAAGTTC CTCAAATCCGCAGAAACGGAAGCTTCCCATGTGGAGCACCAGATACGCCTGCATGCCCTGGCTTATCCCCAAGTACGGTT TGCCTATAAACGGGACGACCAGCTTGTTTTCGACCTTCCCGCTACAGCGGATCTGCGCGTCCGCATTTCCGCACTGACGG ATGCTGCCACAGCGGCGGCCCTGATTCCGATAGAAACGACCATCGGCCCCGGTATTTCCATCACGGGATTCCTGCTTCCT CTTTCCGAAGCCAGACGCACCAGAAAAGGGCAGTACGTCTTTATGAACACGCGCCCCGTGGAGGACCAGCTCATTAACAG GGCCATTCGGGACGGCTACGGAGGCTTCCCCACCGGACTGCATCCGGCGCTTTTTTTGTATATGGAGGTGGAACCCGCTC TGGTGGACGTCAATGTGCACCCCGCCAAGAAGGAAGTGAGATTCCGCCGTTCCGCAGACGTGGTAAACACCATTGTGGAA GCCATAGCCAACACTCTTCAAAAGCATGCCCGGCAGGAAATCCACGCTGCCGCCGCGCCGGAGCCGGAGAGAACTCTTCC TCCTGCCCATTCTACCACCGCGCCATATGGGGAAATACCCGCCCGTTCCACCAACCCCGGTTCTGCTTTCCCGGCGGCCG CCAGACCGGCCCCTGCTTCTTCCGCCGCCCAACCGCCGCTTTCCTCCTCTGCCAAACAATCCCATGGGGCTGTCCCTCCC CCCACCCTCCGGGCCATTCCCCTGAAACAGGTTCCCGCCACCCAGGGAAAACTGGATTTTCACCGTCAGGAGGATGAAGA GACGGCACGAAACGCCCATGAAAACGCAGCTCTGGAAAGGGATGCCTCCGCCGGATTTTCCTATCTGGGAACACTCCGCC AGCAATTCGCCCTGTTTGAAACGCCGGAAGGCCTGGTTCTGATGCATCCCAAGGCGGCCCGGGAACGCATCATATTTGAA CGGCTGCGCGCACGCCGGGAAGCCCCCATGCCGTCCCAGCAGCTTCTGGATCCGGTGGTGCTGGATCTGGACCCGCGGGA TTTTGCCGTCATCCGGCAGTTCGCCCCGCATTTTGACCAGGCCGGCATGGCCGTTACGCCCTTTGGACAGAATACAATCA GAATAGAATCCATCCCCGCACTGCTGGAACTGGAAAACGCACGCGCTTTTCTCCTGGAGCTGGTGGACCGTCTCACCCAG TCCGAATTCAGCCGAAATGCCAAACGCGTGGCTTATGAGACCTTCATTGGGGAATTTGCCAGAAAATCCGCCTGGAGGGA GCGCATTTCCCCTCACCGGGCCCCTGCCATCCTAAAGGATTTGCTTGCCTGTGAAGTGCCGTACTGCACCCCGGGTGGCA AACCCACGCTGGTGAATTATTCCGTTCCGGAAATTAAACGTAAATTCGGCCTACAGGCATAA
Upstream 100 bases:
>100_bases GGTGACGGTTTCTCCCGGCGACCGGGTGGAAATCGTCTCCATCGTCGCCGGCGGCTAGGGTTCCGCTTTCGGGAACAGTC TTTTCCAATCCGTCATCGCC
Downstream 100 bases:
>100_bases GGATAAGGGAACCTTGTTTTCCGGAAAACAGGCCGAAACGCTGCAAGATTTTACGGCAAACGGAAAATATGCAGCCAAAG ACGGATTGACGCCCGCTTCC
Product: DNA mismatch repair protein MutL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 633; Mature: 632
Protein sequence:
>633_residues MPSIHVMSPTLASQVAAGEVVERPASVVKELVENSLDAGAKFVRVEIRRGGVGMIKVTDDGSGMSRADAELCTKRHATSK LSSLEELFEITHLGFRGEALPSIASVSRFKLCTRQQQDLEGWEIRIDGGLEHEPRSSGVSPGTAIEVADLFYNTPARRKF LKSAETEASHVEHQIRLHALAYPQVRFAYKRDDQLVFDLPATADLRVRISALTDAATAAALIPIETTIGPGISITGFLLP LSEARRTRKGQYVFMNTRPVEDQLINRAIRDGYGGFPTGLHPALFLYMEVEPALVDVNVHPAKKEVRFRRSADVVNTIVE AIANTLQKHARQEIHAAAAPEPERTLPPAHSTTAPYGEIPARSTNPGSAFPAAARPAPASSAAQPPLSSSAKQSHGAVPP PTLRAIPLKQVPATQGKLDFHRQEDEETARNAHENAALERDASAGFSYLGTLRQQFALFETPEGLVLMHPKAARERIIFE RLRARREAPMPSQQLLDPVVLDLDPRDFAVIRQFAPHFDQAGMAVTPFGQNTIRIESIPALLELENARAFLLELVDRLTQ SEFSRNAKRVAYETFIGEFARKSAWRERISPHRAPAILKDLLACEVPYCTPGGKPTLVNYSVPEIKRKFGLQA
Sequences:
>Translated_633_residues MPSIHVMSPTLASQVAAGEVVERPASVVKELVENSLDAGAKFVRVEIRRGGVGMIKVTDDGSGMSRADAELCTKRHATSK LSSLEELFEITHLGFRGEALPSIASVSRFKLCTRQQQDLEGWEIRIDGGLEHEPRSSGVSPGTAIEVADLFYNTPARRKF LKSAETEASHVEHQIRLHALAYPQVRFAYKRDDQLVFDLPATADLRVRISALTDAATAAALIPIETTIGPGISITGFLLP LSEARRTRKGQYVFMNTRPVEDQLINRAIRDGYGGFPTGLHPALFLYMEVEPALVDVNVHPAKKEVRFRRSADVVNTIVE AIANTLQKHARQEIHAAAAPEPERTLPPAHSTTAPYGEIPARSTNPGSAFPAAARPAPASSAAQPPLSSSAKQSHGAVPP PTLRAIPLKQVPATQGKLDFHRQEDEETARNAHENAALERDASAGFSYLGTLRQQFALFETPEGLVLMHPKAARERIIFE RLRARREAPMPSQQLLDPVVLDLDPRDFAVIRQFAPHFDQAGMAVTPFGQNTIRIESIPALLELENARAFLLELVDRLTQ SEFSRNAKRVAYETFIGEFARKSAWRERISPHRAPAILKDLLACEVPYCTPGGKPTLVNYSVPEIKRKFGLQA >Mature_632_residues PSIHVMSPTLASQVAAGEVVERPASVVKELVENSLDAGAKFVRVEIRRGGVGMIKVTDDGSGMSRADAELCTKRHATSKL SSLEELFEITHLGFRGEALPSIASVSRFKLCTRQQQDLEGWEIRIDGGLEHEPRSSGVSPGTAIEVADLFYNTPARRKFL KSAETEASHVEHQIRLHALAYPQVRFAYKRDDQLVFDLPATADLRVRISALTDAATAAALIPIETTIGPGISITGFLLPL SEARRTRKGQYVFMNTRPVEDQLINRAIRDGYGGFPTGLHPALFLYMEVEPALVDVNVHPAKKEVRFRRSADVVNTIVEA IANTLQKHARQEIHAAAAPEPERTLPPAHSTTAPYGEIPARSTNPGSAFPAAARPAPASSAAQPPLSSSAKQSHGAVPPP TLRAIPLKQVPATQGKLDFHRQEDEETARNAHENAALERDASAGFSYLGTLRQQFALFETPEGLVLMHPKAARERIIFER LRARREAPMPSQQLLDPVVLDLDPRDFAVIRQFAPHFDQAGMAVTPFGQNTIRIESIPALLELENARAFLLELVDRLTQS EFSRNAKRVAYETFIGEFARKSAWRERISPHRAPAILKDLLACEVPYCTPGGKPTLVNYSVPEIKRKFGLQA
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family
Homologues:
Organism=Homo sapiens, GI4557757, Length=473, Percent_Identity=30.0211416490486, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI4505911, Length=321, Percent_Identity=29.9065420560748, Blast_Score=134, Evalue=3e-31, Organism=Homo sapiens, GI189458898, Length=321, Percent_Identity=29.9065420560748, Blast_Score=133, Evalue=4e-31, Organism=Homo sapiens, GI189458896, Length=317, Percent_Identity=28.7066246056782, Blast_Score=122, Evalue=1e-27, Organism=Homo sapiens, GI4505913, Length=323, Percent_Identity=26.0061919504644, Blast_Score=113, Evalue=7e-25, Organism=Homo sapiens, GI310128478, Length=325, Percent_Identity=26.4615384615385, Blast_Score=112, Evalue=9e-25, Organism=Homo sapiens, GI91992160, Length=263, Percent_Identity=28.1368821292776, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI91992162, Length=263, Percent_Identity=28.1368821292776, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI263191589, Length=379, Percent_Identity=27.4406332453826, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI310128480, Length=297, Percent_Identity=23.2323232323232, Blast_Score=80, Evalue=6e-15, Organism=Escherichia coli, GI1790612, Length=576, Percent_Identity=34.375, Blast_Score=248, Evalue=1e-66, Organism=Caenorhabditis elegans, GI71991825, Length=320, Percent_Identity=30.3125, Blast_Score=155, Evalue=7e-38, Organism=Caenorhabditis elegans, GI17562796, Length=440, Percent_Identity=24.3181818181818, Blast_Score=127, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6323819, Length=369, Percent_Identity=31.4363143631436, Blast_Score=189, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6324247, Length=365, Percent_Identity=23.8356164383562, Blast_Score=122, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6323063, Length=397, Percent_Identity=24.9370277078086, Blast_Score=86, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6325093, Length=153, Percent_Identity=32.6797385620915, Blast_Score=81, Evalue=5e-16, Organism=Drosophila melanogaster, GI17136968, Length=629, Percent_Identity=25.2782193958665, Blast_Score=172, Evalue=6e-43, Organism=Drosophila melanogaster, GI17136970, Length=353, Percent_Identity=26.0623229461756, Blast_Score=125, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MUTL_AKKM8 (B2ULE2)
Other databases:
- EMBL: CP001071 - RefSeq: YP_001876712.1 - ProteinModelPortal: B2ULE2 - GeneID: 6275009 - GenomeReviews: CP001071_GR - KEGG: amu:Amuc_0086 - HOGENOM: HBG520262 - OMA: LYLIDQV - HAMAP: MF_00149 - InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 - Gene3D: G3DSA:3.30.565.10 - Gene3D: G3DSA:3.30.230.10 - PANTHER: PTHR10073 - SMART: SM00387 - SMART: SM00853 - TIGRFAMs: TIGR00585
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C; SSF55874 ATP_bd_ATPase; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: NA
Molecular weight: Translated: 69555; Mature: 69424
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSIHVMSPTLASQVAAGEVVERPASVVKELVENSLDAGAKFVRVEIRRGGVGMIKVTDD CCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEEECC GSGMSRADAELCTKRHATSKLSSLEELFEITHLGFRGEALPSIASVSRFKLCTRQQQDLE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC GWEIRIDGGLEHEPRSSGVSPGTAIEVADLFYNTPARRKFLKSAETEASHVEHQIRLHAL CEEEEECCCCCCCCCCCCCCCCCCEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEE AYPQVRFAYKRDDQLVFDLPATADLRVRISALTDAATAAALIPIETTIGPGISITGFLLP CCCCEEEEEECCCCEEEECCCCCCEEEEEEHHHHHHHHEEEEEEECCCCCCCEEHHEEEE LSEARRTRKGQYVFMNTRPVEDQLINRAIRDGYGGFPTGLHPALFLYMEVEPALVDVNVH HHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCEEEEEECC PAKKEVRFRRSADVVNTIVEAIANTLQKHARQEIHAAAAPEPERTLPPAHSTTAPYGEIP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC ARSTNPGSAFPAAARPAPASSAAQPPLSSSAKQSHGAVPPPTLRAIPLKQVPATQGKLDF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEECCCCCCCCCCCCCCC HRQEDEETARNAHENAALERDASAGFSYLGTLRQQFALFETPEGLVLMHPKAARERIIFE CCCCHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHH RLRARREAPMPSQQLLDPVVLDLDPRDFAVIRQFAPHFDQAGMAVTPFGQNTIRIESIPA HHHHHHCCCCCHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCEEECCCCCEEEEECCCH LLELENARAFLLELVDRLTQSEFSRNAKRVAYETFIGEFARKSAWRERISPHRAPAILKD HEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LLACEVPYCTPGGKPTLVNYSVPEIKRKFGLQA HHHHCCCCCCCCCCCEEEECCHHHHHHHHCCCC >Mature Secondary Structure PSIHVMSPTLASQVAAGEVVERPASVVKELVENSLDAGAKFVRVEIRRGGVGMIKVTDD CCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEEECC GSGMSRADAELCTKRHATSKLSSLEELFEITHLGFRGEALPSIASVSRFKLCTRQQQDLE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC GWEIRIDGGLEHEPRSSGVSPGTAIEVADLFYNTPARRKFLKSAETEASHVEHQIRLHAL CEEEEECCCCCCCCCCCCCCCCCCEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEE AYPQVRFAYKRDDQLVFDLPATADLRVRISALTDAATAAALIPIETTIGPGISITGFLLP CCCCEEEEEECCCCEEEECCCCCCEEEEEEHHHHHHHHEEEEEEECCCCCCCEEHHEEEE LSEARRTRKGQYVFMNTRPVEDQLINRAIRDGYGGFPTGLHPALFLYMEVEPALVDVNVH HHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCEEEEEECC PAKKEVRFRRSADVVNTIVEAIANTLQKHARQEIHAAAAPEPERTLPPAHSTTAPYGEIP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC ARSTNPGSAFPAAARPAPASSAAQPPLSSSAKQSHGAVPPPTLRAIPLKQVPATQGKLDF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEECCCCCCCCCCCCCCC HRQEDEETARNAHENAALERDASAGFSYLGTLRQQFALFETPEGLVLMHPKAARERIIFE CCCCHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHH RLRARREAPMPSQQLLDPVVLDLDPRDFAVIRQFAPHFDQAGMAVTPFGQNTIRIESIPA HHHHHHCCCCCHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCEEECCCCCEEEEECCCH LLELENARAFLLELVDRLTQSEFSRNAKRVAYETFIGEFARKSAWRERISPHRAPAILKD HEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LLACEVPYCTPGGKPTLVNYSVPEIKRKFGLQA HHHHCCCCCCCCCCCEEEECCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA