Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187734599

Identifier: 187734599

GI number: 187734599

Start: 112400

End: 112657

Strand: Direct

Name: 187734599

Synonym: Amuc_0085

Alternate gene names: NA

Gene position: 112400-112657 (Clockwise)

Preceding gene: 187734595

Following gene: 187734600

Centisome position: 4.22

GC content: 57.36

Gene sequence:

>258_bases
ATGATTCTGGATTTTTTCTCCTGTTGTGGTACAGTAGCTTCCGTCATGGCAGCCCAGAACGATATTATGCTGAACGGAGC
CCCGTACGAACTGGCGGAACCCTGTTCCGTCTCCCGGCTTCTGGAACTTTTGAACATGAAAGGCAAACCCGTCGTCGTGG
AACACAACGGGGCCGCGCTCCTGCCGCAGGATTTTTCCCGGGTGACGGTTTCTCCCGGCGACCGGGTGGAAATCGTCTCC
ATCGTCGCCGGCGGCTAG

Upstream 100 bases:

>100_bases
CGCCTTTCACGCGGGCAACACGGGTTCGAGTCCCGTACGCGATGCCAGCTTTTCTTTTTTCCAACTTGCACCGGAATCTT
TTTTACGCCATCCCCGCGGG

Downstream 100 bases:

>100_bases
GGTTCCGCTTTCGGGAACAGTCTTTTCCAATCCGTCATCGCCATGCCATCCATCCACGTCATGTCTCCCACCCTTGCCAG
CCAAGTGGCGGCAGGAGAAG

Product: thiamine biosynthesis protein ThiS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MILDFFSCCGTVASVMAAQNDIMLNGAPYELAEPCSVSRLLELLNMKGKPVVVEHNGAALLPQDFSRVTVSPGDRVEIVS
IVAGG

Sequences:

>Translated_85_residues
MILDFFSCCGTVASVMAAQNDIMLNGAPYELAEPCSVSRLLELLNMKGKPVVVEHNGAALLPQDFSRVTVSPGDRVEIVS
IVAGG
>Mature_85_residues
MILDFFSCCGTVASVMAAQNDIMLNGAPYELAEPCSVSRLLELLNMKGKPVVVEHNGAALLPQDFSRVTVSPGDRVEIVS
IVAGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8965; Mature: 8965

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILDFFSCCGTVASVMAAQNDIMLNGAPYELAEPCSVSRLLELLNMKGKPVVVEHNGAAL
CEEHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCEE
LPQDFSRVTVSPGDRVEIVSIVAGG
CCCCCCEEEECCCCCEEEEEEEECC
>Mature Secondary Structure
MILDFFSCCGTVASVMAAQNDIMLNGAPYELAEPCSVSRLLELLNMKGKPVVVEHNGAAL
CEEHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCEE
LPQDFSRVTVSPGDRVEIVSIVAGG
CCCCCCEEEECCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA