| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187734602
Identifier: 187734602
GI number: 187734602
Start: 114937
End: 116889
Strand: Direct
Name: 187734602
Synonym: Amuc_0088
Alternate gene names: NA
Gene position: 114937-116889 (Clockwise)
Preceding gene: 187734600
Following gene: 187734603
Centisome position: 4.31
GC content: 59.14
Gene sequence:
>1953_bases ATGCCAGACTCTCCCCCCAGCACCTCCCCCGCTCCGCGCATTGCTGAAACTGCCGCCGGGAAAATTCTGGCGGGCCTCCT GGCCCTTTTTTACATCTTCCTGGCAACGACGGCGGCAGGCGGGGAATGGCACACCCTTTTCCTTCCCGCCTGCTTTCTGG CGGCAGCCCTCCTGCTGTTCTGCTTCTGTATTCTCCGGGGATACAAGATTCCCAGCCCCGGACTGCCGGGCTGGCTGGCC CTGGGCCTGGGAGGCGGCTATTTCCTTGTCCGGGCATGGTTTTCCCCCTGGTTTTATTATGAGAGCGTAGCGGATCTGGG CCTTATCGCCACGGCCATCGTCATGTTCGCGGCGGGAACGTATGCCGGAGCCGGAAACGGGGAAAAGAGCATTCTTCCCG TACTGGCTGCGGCATTGGGGCTGCTGAATGCCCTGCTGTGGGGGTATCAGAACATAACGGGAACGGAAGCCTCCTGGTTC AGACCGGATTATTCCCTGTTCGGCACGGAAATCCGCAATATCGGATTGTTCGGATACAAAAATTTTTCCGCCCATTTCCT GTCCGTCACCGGTTTTTTCCTTTGCGCATACAGCATGGCTTCCGCCAGAAAATGGGGCATCCGCCTGTTCACGGGATTGG CGCTCATCCTCGTTTCCTTCACGTGCGGCTCGCGGTCCGCCTTCCCAAACGCCCTGGCTGGCGTAACCCTGTGCTTCTTT ATTTATACCTCCAGCGTTTTCCGCAATAACAGAAAATTTTACACGGCGTCCATCCTCTTTATTATCCTGCTTTTCCTGGG CACGTCCTATGCCGTGCTGGATTTGTCCCGGGGGGCGGGCAGGCTTGCCGCCCTTCTGGATACGTTTTCCTTCGGCAACC GGCTGGACCTGTCCAAACTGGCCTGGGCGCTGGCGGACCAGGCTCCGCTGTTCGGTCACGGCAGCCGGATGTACACCAAT CTTTCCACGGAGTTTTTCTCCGGAGCCAACCTCCCCAATTTTGCCCACCACGAATACGCACAAGCCGCCTGCGACTACGG CTATGCCGGGCTGGGGCTGATGCTAGCTCTGCTGGCCCTGTTTCTTATTTTCGGACTCCGGAGCGTTCTGAAATTGTCAG GAGAACATCAACGGCCCAATCCTCTGGGACCGGCGGCGTTCTGCGTATTGTGCATCGCCGCTTTCCACGCCTATGGGGAA TTCATCTGGCATAACCCTGCCTTGCTTGGAGCCAGCGCCCTATGCGGCGGCATTACCTGCACGGCCCCTCTTTCCAGGGT GAAGGCTTCGCGCCAAGCCGGCCGCTGGCTTCAAGCGACCGCCGCACTGCTGATGGCCATATTGGCGCTGTGTTATGCGT TTCTGGCTTTTCCGGTCTGGAAAAACTCCCTTCAAGCCGTCCCGGCTTCCTCCGGCAACCGGCTGCCCATGCTGGAAGCG GCCGCCTCCTGCAGCCTGGACCCGGATTTGGTGCGGCGCAACATTCTGCATGCCGCAGGCAGTTCTCCCCCCCCAAACCC GGCCCGGCTCAAAGCATTGGAGCATCAGGAAGAAAAAGCGGAATTACTGAGCCCCGGAAACCACGGCCTGACGGCGGCTA AAAGCCTCCTTTACATCCTGCAGGGACGCCTCACGGAAGCGGAGCAACTGCTCCGCCCATACGTAGAGAGTCCCGGCAGG TTTGATGACCGAATGTTCGCCTGGACTACCATTTACAATAATATGCTGTATTCCTGGAGTACGGCCATTGCTGCCCAGTC CCCCGGACGCGCCCTGTCCATGGCCATGACGGCCCAGCGCCTGATGTCCGCCCAAACGGACCGGTGGCTGTATTATGGGG CCCTGGATCCCGAAGTCAGGAAAAAACACTACTCGCGCCTCAATGAGCTCAAGATGCTCATCATGATGCTTCAGGCCCGC GGAACGACGCCCGACCCTTCCTGGAGGAAATAG
Upstream 100 bases:
>100_bases CTGGCATTCGGACGCATCCTCCCACATACAACAGGGAGCTTGCTCTTGGCAAGGAAGTTTCCCGCGTTTATACTGCAGCC TTCCAGATAAATTCCCAGCC
Downstream 100 bases:
>100_bases TATTCCGGAGAATCGGGAAAAAGGAATATGTGCAGCAGCCGTTATATCCTTTTTCCAGAGAAGCCGCTCCATACAGAAGT TTCCCCGTCTTATCCGGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 650; Mature: 649
Protein sequence:
>650_residues MPDSPPSTSPAPRIAETAAGKILAGLLALFYIFLATTAAGGEWHTLFLPACFLAAALLLFCFCILRGYKIPSPGLPGWLA LGLGGGYFLVRAWFSPWFYYESVADLGLIATAIVMFAAGTYAGAGNGEKSILPVLAAALGLLNALLWGYQNITGTEASWF RPDYSLFGTEIRNIGLFGYKNFSAHFLSVTGFFLCAYSMASARKWGIRLFTGLALILVSFTCGSRSAFPNALAGVTLCFF IYTSSVFRNNRKFYTASILFIILLFLGTSYAVLDLSRGAGRLAALLDTFSFGNRLDLSKLAWALADQAPLFGHGSRMYTN LSTEFFSGANLPNFAHHEYAQAACDYGYAGLGLMLALLALFLIFGLRSVLKLSGEHQRPNPLGPAAFCVLCIAAFHAYGE FIWHNPALLGASALCGGITCTAPLSRVKASRQAGRWLQATAALLMAILALCYAFLAFPVWKNSLQAVPASSGNRLPMLEA AASCSLDPDLVRRNILHAAGSSPPPNPARLKALEHQEEKAELLSPGNHGLTAAKSLLYILQGRLTEAEQLLRPYVESPGR FDDRMFAWTTIYNNMLYSWSTAIAAQSPGRALSMAMTAQRLMSAQTDRWLYYGALDPEVRKKHYSRLNELKMLIMMLQAR GTTPDPSWRK
Sequences:
>Translated_650_residues MPDSPPSTSPAPRIAETAAGKILAGLLALFYIFLATTAAGGEWHTLFLPACFLAAALLLFCFCILRGYKIPSPGLPGWLA LGLGGGYFLVRAWFSPWFYYESVADLGLIATAIVMFAAGTYAGAGNGEKSILPVLAAALGLLNALLWGYQNITGTEASWF RPDYSLFGTEIRNIGLFGYKNFSAHFLSVTGFFLCAYSMASARKWGIRLFTGLALILVSFTCGSRSAFPNALAGVTLCFF IYTSSVFRNNRKFYTASILFIILLFLGTSYAVLDLSRGAGRLAALLDTFSFGNRLDLSKLAWALADQAPLFGHGSRMYTN LSTEFFSGANLPNFAHHEYAQAACDYGYAGLGLMLALLALFLIFGLRSVLKLSGEHQRPNPLGPAAFCVLCIAAFHAYGE FIWHNPALLGASALCGGITCTAPLSRVKASRQAGRWLQATAALLMAILALCYAFLAFPVWKNSLQAVPASSGNRLPMLEA AASCSLDPDLVRRNILHAAGSSPPPNPARLKALEHQEEKAELLSPGNHGLTAAKSLLYILQGRLTEAEQLLRPYVESPGR FDDRMFAWTTIYNNMLYSWSTAIAAQSPGRALSMAMTAQRLMSAQTDRWLYYGALDPEVRKKHYSRLNELKMLIMMLQAR GTTPDPSWRK >Mature_649_residues PDSPPSTSPAPRIAETAAGKILAGLLALFYIFLATTAAGGEWHTLFLPACFLAAALLLFCFCILRGYKIPSPGLPGWLAL GLGGGYFLVRAWFSPWFYYESVADLGLIATAIVMFAAGTYAGAGNGEKSILPVLAAALGLLNALLWGYQNITGTEASWFR PDYSLFGTEIRNIGLFGYKNFSAHFLSVTGFFLCAYSMASARKWGIRLFTGLALILVSFTCGSRSAFPNALAGVTLCFFI YTSSVFRNNRKFYTASILFIILLFLGTSYAVLDLSRGAGRLAALLDTFSFGNRLDLSKLAWALADQAPLFGHGSRMYTNL STEFFSGANLPNFAHHEYAQAACDYGYAGLGLMLALLALFLIFGLRSVLKLSGEHQRPNPLGPAAFCVLCIAAFHAYGEF IWHNPALLGASALCGGITCTAPLSRVKASRQAGRWLQATAALLMAILALCYAFLAFPVWKNSLQAVPASSGNRLPMLEAA ASCSLDPDLVRRNILHAAGSSPPPNPARLKALEHQEEKAELLSPGNHGLTAAKSLLYILQGRLTEAEQLLRPYVESPGRF DDRMFAWTTIYNNMLYSWSTAIAAQSPGRALSMAMTAQRLMSAQTDRWLYYGALDPEVRKKHYSRLNELKMLIMMLQARG TTPDPSWRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70707; Mature: 70576
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: PS00626 RCC1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDSPPSTSPAPRIAETAAGKILAGLLALFYIFLATTAAGGEWHTLFLPACFLAAALLLF CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH CFCILRGYKIPSPGLPGWLALGLGGGYFLVRAWFSPWFYYESVADLGLIATAIVMFAAGT HHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC YAGAGNGEKSILPVLAAALGLLNALLWGYQNITGTEASWFRPDYSLFGTEIRNIGLFGYK CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHCCEEEEC NFSAHFLSVTGFFLCAYSMASARKWGIRLFTGLALILVSFTCGSRSAFPNALAGVTLCFF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH IYTSSVFRNNRKFYTASILFIILLFLGTSYAVLDLSRGAGRLAALLDTFSFGNRLDLSKL HHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCCCHHHH AWALADQAPLFGHGSRMYTNLSTEFFSGANLPNFAHHEYAQAACDYGYAGLGLMLALLAL HHHHHCCCCCCCCCCHHEECCCHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH FLIFGLRSVLKLSGEHQRPNPLGPAAFCVLCIAAFHAYGEFIWHNPALLGASALCGGITC HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC TAPLSRVKASRQAGRWLQATAALLMAILALCYAFLAFPVWKNSLQAVPASSGNRLPMLEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH AASCSLDPDLVRRNILHAAGSSPPPNPARLKALEHQEEKAELLSPGNHGLTAAKSLLYIL HHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH QGRLTEAEQLLRPYVESPGRFDDRMFAWTTIYNNMLYSWSTAIAAQSPGRALSMAMTAQR HCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LMSAQTDRWLYYGALDPEVRKKHYSRLNELKMLIMMLQARGTTPDPSWRK HHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PDSPPSTSPAPRIAETAAGKILAGLLALFYIFLATTAAGGEWHTLFLPACFLAAALLLF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH CFCILRGYKIPSPGLPGWLALGLGGGYFLVRAWFSPWFYYESVADLGLIATAIVMFAAGT HHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC YAGAGNGEKSILPVLAAALGLLNALLWGYQNITGTEASWFRPDYSLFGTEIRNIGLFGYK CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHCCEEEEC NFSAHFLSVTGFFLCAYSMASARKWGIRLFTGLALILVSFTCGSRSAFPNALAGVTLCFF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH IYTSSVFRNNRKFYTASILFIILLFLGTSYAVLDLSRGAGRLAALLDTFSFGNRLDLSKL HHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCCCHHHH AWALADQAPLFGHGSRMYTNLSTEFFSGANLPNFAHHEYAQAACDYGYAGLGLMLALLAL HHHHHCCCCCCCCCCHHEECCCHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH FLIFGLRSVLKLSGEHQRPNPLGPAAFCVLCIAAFHAYGEFIWHNPALLGASALCGGITC HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC TAPLSRVKASRQAGRWLQATAALLMAILALCYAFLAFPVWKNSLQAVPASSGNRLPMLEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH AASCSLDPDLVRRNILHAAGSSPPPNPARLKALEHQEEKAELLSPGNHGLTAAKSLLYIL HHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH QGRLTEAEQLLRPYVESPGRFDDRMFAWTTIYNNMLYSWSTAIAAQSPGRALSMAMTAQR HCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LMSAQTDRWLYYGALDPEVRKKHYSRLNELKMLIMMLQARGTTPDPSWRK HHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA