| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is xasA [C]
Identifier: 187734553
GI number: 187734553
Start: 51964
End: 53448
Strand: Direct
Name: xasA [C]
Synonym: Amuc_0037
Alternate gene names: 187734553
Gene position: 51964-53448 (Clockwise)
Preceding gene: 187734550
Following gene: 187734554
Centisome position: 1.95
GC content: 55.08
Gene sequence:
>1485_bases ATGGGAGTATTCACTCTCGCCATGATCAACGTTTCCGCCATTGTCAGCCTGCGCGGCATGCCTGCGGAAAGCACTTACGG ACTGAGTTCCGTTTTTTATTACATTTTCGCCGCGGTATTCTTTCTGGTGCCTGTTTCCCTGGTCGCCGCGGAGCTTACTA CCGGATGGCCCCAAAAGGGCGGCGTTTACCGCTGGGTAGGCGAGGCATTCGGGAAAAAATGGGGGTTCCTGGCCATCTGG CTGCAATGGATTGAGAGTACCATCTGGTTCCCTACCGTTCTGACATTCGCCGCCGTTTCCCTGGCTTTCATGGGGCCCGG ACAAAGATGGGATGAAGCGCTTGCCGCCAATAAATGGTATGTTCTCATCGTGGTGCTGTGCGTGTACTGGGCGGCCACCC TGCTTAATCTGCGCGGCATGAAGACTTCCGCAGGCGTCACCAAATGGGGAACCATCATCGGAACCATTATTCCCGGAGCC ATCCTGATCCTGCTGGGCCTGGGCTATTGGGCCGGCGGCAACCCGATCCTGCTGGATATGAGCTGGGACAAGCTGGTGCC GGACATGAGCAATTTCAACAACCTCGTTCTGGCAGCCAGCATCTTCCTGTTTTACGCGGGGATGGAAATGTCCGCCGTGC ATGTGAAGGATGTGAATAATCCCGGACGCAATTATCCGCTGGCCATTCTGATTTCCGCCATCATTACGGTGCTTATTTTC GTTCTAGGCACGCTGGCCATCGGCTTCATCATTCCCAATTCCCAGATTAATCTGGTGCAGAGCCTGCTGATTACTTATGA CAGCTATTTCAGCTTCTTCGGCCTCGGCTGGATGAACTGGATTCTGGCGCTTGCGCTGGCCGTCGGCGTTCTGGCCCAGG TAACCGCATGGGTGGGAGGCCCCTCAAAAGGCCTGTACCAAGTGGGCCTGGCCGGCAACCTTCCGCCTGTCATGCAGAAG CGGAACAAGAACAACGTCCAGATGGGCATCCTTTTTATCCAGGGGGGAATCGTCACCCTGCTTTCCATCATGTTTGTGAT CATGCCTTCCGTGCAATCCGCCTACCAGATTATTTCCCAGCTGACCATCATTCTGTACCTCATCATGTACATGCTGATGT TCGCGTCAGGCATTTACCTGCGCTACCGGGAACCGAATACGCCCCGTACTTTCCGCATTCCCGGCGGCAGAACCTTCGGC ATGTGGATTGTCGGAGGGCTCGGCTTCCTGGCCAGCCTGGCGGCTTTCCTGGTGAGCTTCATCCCGCCTAACCAAATTAC CGTAGGCAGCAGTACCATGTACATTCTCCTTCTGGTGGTGGGTACCTTCATTTTCGCGGGTATTCCCTTTATCATCCATG CCATGGCCAAACCCTCCTGGAAACGGCCGGTGGATCCCGAAGACGCCTTTGAACCCTTCGGATGGGAGAAAAACAATGAT TCCCATTCCGCAGCAACCCCTAGCCATTCCATATCCCATGAGTGA
Upstream 100 bases:
>100_bases AACCCGGAATAAACCAATGAATAATACGACTCAACCAGGGGCTGCTCCAACAGGCCCCGCAACAACCAATAACGCTCCGG CGGTAAAATCCGTCCTCCGC
Downstream 100 bases:
>100_bases CATTCCTTCCAATGAACAGATCCGGACGGCCCTGGATAACGCATACGCCTACGCCAAAACCGTCCAGGGAGGCAAAAACG CCTCGTACATTCCCGCCCTG
Product: amino acid permease-associated region
Products: L-glutamate [Cytoplasm]; 4-aminobutyrate [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 494; Mature: 493
Protein sequence:
>494_residues MGVFTLAMINVSAIVSLRGMPAESTYGLSSVFYYIFAAVFFLVPVSLVAAELTTGWPQKGGVYRWVGEAFGKKWGFLAIW LQWIESTIWFPTVLTFAAVSLAFMGPGQRWDEALAANKWYVLIVVLCVYWAATLLNLRGMKTSAGVTKWGTIIGTIIPGA ILILLGLGYWAGGNPILLDMSWDKLVPDMSNFNNLVLAASIFLFYAGMEMSAVHVKDVNNPGRNYPLAILISAIITVLIF VLGTLAIGFIIPNSQINLVQSLLITYDSYFSFFGLGWMNWILALALAVGVLAQVTAWVGGPSKGLYQVGLAGNLPPVMQK RNKNNVQMGILFIQGGIVTLLSIMFVIMPSVQSAYQIISQLTIILYLIMYMLMFASGIYLRYREPNTPRTFRIPGGRTFG MWIVGGLGFLASLAAFLVSFIPPNQITVGSSTMYILLLVVGTFIFAGIPFIIHAMAKPSWKRPVDPEDAFEPFGWEKNND SHSAATPSHSISHE
Sequences:
>Translated_494_residues MGVFTLAMINVSAIVSLRGMPAESTYGLSSVFYYIFAAVFFLVPVSLVAAELTTGWPQKGGVYRWVGEAFGKKWGFLAIW LQWIESTIWFPTVLTFAAVSLAFMGPGQRWDEALAANKWYVLIVVLCVYWAATLLNLRGMKTSAGVTKWGTIIGTIIPGA ILILLGLGYWAGGNPILLDMSWDKLVPDMSNFNNLVLAASIFLFYAGMEMSAVHVKDVNNPGRNYPLAILISAIITVLIF VLGTLAIGFIIPNSQINLVQSLLITYDSYFSFFGLGWMNWILALALAVGVLAQVTAWVGGPSKGLYQVGLAGNLPPVMQK RNKNNVQMGILFIQGGIVTLLSIMFVIMPSVQSAYQIISQLTIILYLIMYMLMFASGIYLRYREPNTPRTFRIPGGRTFG MWIVGGLGFLASLAAFLVSFIPPNQITVGSSTMYILLLVVGTFIFAGIPFIIHAMAKPSWKRPVDPEDAFEPFGWEKNND SHSAATPSHSISHE >Mature_493_residues GVFTLAMINVSAIVSLRGMPAESTYGLSSVFYYIFAAVFFLVPVSLVAAELTTGWPQKGGVYRWVGEAFGKKWGFLAIWL QWIESTIWFPTVLTFAAVSLAFMGPGQRWDEALAANKWYVLIVVLCVYWAATLLNLRGMKTSAGVTKWGTIIGTIIPGAI LILLGLGYWAGGNPILLDMSWDKLVPDMSNFNNLVLAASIFLFYAGMEMSAVHVKDVNNPGRNYPLAILISAIITVLIFV LGTLAIGFIIPNSQINLVQSLLITYDSYFSFFGLGWMNWILALALAVGVLAQVTAWVGGPSKGLYQVGLAGNLPPVMQKR NKNNVQMGILFIQGGIVTLLSIMFVIMPSVQSAYQIISQLTIILYLIMYMLMFASGIYLRYREPNTPRTFRIPGGRTFGM WIVGGLGFLASLAAFLVSFIPPNQITVGSSTMYILLLVVGTFIFAGIPFIIHAMAKPSWKRPVDPEDAFEPFGWEKNNDS HSAATPSHSISHE
Specific function: Probable Amino Acid Transporter. Involved In Extreme Acid Resistance. [C]
COG id: COG0531
COG function: function code E; Amino acid transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]
Homologues:
Organism=Homo sapiens, GI115648063, Length=403, Percent_Identity=24.5657568238213, Blast_Score=70, Evalue=6e-12, Organism=Homo sapiens, GI115648022, Length=403, Percent_Identity=24.5657568238213, Blast_Score=70, Evalue=6e-12, Organism=Homo sapiens, GI186910308, Length=358, Percent_Identity=24.3016759776536, Blast_Score=70, Evalue=7e-12, Organism=Homo sapiens, GI186910306, Length=358, Percent_Identity=24.3016759776536, Blast_Score=70, Evalue=7e-12, Organism=Homo sapiens, GI186910304, Length=358, Percent_Identity=24.3016759776536, Blast_Score=70, Evalue=7e-12, Organism=Escherichia coli, GI1787768, Length=493, Percent_Identity=31.8458417849899, Blast_Score=235, Evalue=5e-63, Organism=Escherichia coli, GI48994921, Length=450, Percent_Identity=22.2222222222222, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI87081798, Length=458, Percent_Identity=21.3973799126638, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI2367353, Length=349, Percent_Identity=23.4957020057307, Blast_Score=62, Evalue=8e-11, Organism=Drosophila melanogaster, GI221331183, Length=364, Percent_Identity=23.9010989010989, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI17647653, Length=364, Percent_Identity=23.9010989010989, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI24664379, Length=364, Percent_Identity=23.9010989010989, Blast_Score=68, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 54196; Mature: 54065
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVFTLAMINVSAIVSLRGMPAESTYGLSSVFYYIFAAVFFLVPVSLVAAELTTGWPQKG CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GVYRWVGEAFGKKWGFLAIWLQWIESTIWFPTVLTFAAVSLAFMGPGQRWDEALAANKWY CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHH VLIVVLCVYWAATLLNLRGMKTSAGVTKWGTIIGTIIPGAILILLGLGYWAGGNPILLDM HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC SWDKLVPDMSNFNNLVLAASIFLFYAGMEMSAVHVKDVNNPGRNYPLAILISAIITVLIF CHHHHCCCHHCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHH VLGTLAIGFIIPNSQINLVQSLLITYDSYFSFFGLGWMNWILALALAVGVLAQVTAWVGG HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PSKGLYQVGLAGNLPPVMQKRNKNNVQMGILFIQGGIVTLLSIMFVIMPSVQSAYQIISQ CCCCEEEECCCCCCCHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH LTIILYLIMYMLMFASGIYLRYREPNTPRTFRIPGGRTFGMWIVGGLGFLASLAAFLVSF HHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH IPPNQITVGSSTMYILLLVVGTFIFAGIPFIIHAMAKPSWKRPVDPEDAFEPFGWEKNND CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCC SHSAATPSHSISHE CCCCCCCCCCCCCC >Mature Secondary Structure GVFTLAMINVSAIVSLRGMPAESTYGLSSVFYYIFAAVFFLVPVSLVAAELTTGWPQKG CCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GVYRWVGEAFGKKWGFLAIWLQWIESTIWFPTVLTFAAVSLAFMGPGQRWDEALAANKWY CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHH VLIVVLCVYWAATLLNLRGMKTSAGVTKWGTIIGTIIPGAILILLGLGYWAGGNPILLDM HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC SWDKLVPDMSNFNNLVLAASIFLFYAGMEMSAVHVKDVNNPGRNYPLAILISAIITVLIF CHHHHCCCHHCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHH VLGTLAIGFIIPNSQINLVQSLLITYDSYFSFFGLGWMNWILALALAVGVLAQVTAWVGG HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PSKGLYQVGLAGNLPPVMQKRNKNNVQMGILFIQGGIVTLLSIMFVIMPSVQSAYQIISQ CCCCEEEECCCCCCCHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH LTIILYLIMYMLMFASGIYLRYREPNTPRTFRIPGGRTFGMWIVGGLGFLASLAAFLVSF HHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH IPPNQITVGSSTMYILLLVVGTFIFAGIPFIIHAMAKPSWKRPVDPEDAFEPFGWEKNND CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCC SHSAATPSHSISHE CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-aminobutyrate [Cytoplasm]; L-glutamate [Periplasm] [C]
Specific reaction: 4-aminobutyrate [Cytoplasm] + L-glutamate [Periplasm] = L-glutamate [Cytoplasm] + 4-aminobutyrate [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8366052 [H]