Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187734549

Identifier: 187734549

GI number: 187734549

Start: 41173

End: 41865

Strand: Direct

Name: 187734549

Synonym: Amuc_0033

Alternate gene names: NA

Gene position: 41173-41865 (Clockwise)

Preceding gene: 187734542

Following gene: 187734550

Centisome position: 1.55

GC content: 57.43

Gene sequence:

>693_bases
ATGGTTCATTTCACCCTGTTCGGGATACCTGTTTACATCCGCCCCAGCTTCTGGGTGGTGCTGGCCATTTTCGGCGGCGC
CCTCAGCATCAGCAGTGTGGAAGATCTCATTTATCCGGCCCTGTTCGTCATTGCCGGCTTCATCGCCATCCTGTCCCATG
AAATGGGACACGCGCTGGTGGGCCGCAAGCTGGGCGGCGGCCAGCAGACGATTGTTCTGGAACTCTTCGGCGGCCTGACA
AGCAGCCATGGCATGCAACTGACGCGCGGAGGGCGGGCCCTCATGATTCTGGCAGGCCCCATGATGACCCTGCTGCTGGG
CATCATCAGCCTGTGGCTCACCTGGAATATCGTCGCTCCTGTCATGGCCTCTTACAACCTGAACTTCTGGGACCTGGCCA
TCAGCCCCTTCACAGCAGCGCTCATCTCCCCCAAGCTGTACATTCTCTCCTGCCTCATCATGATTGGAGAATGGTGGACT
ATCCTGAATCTGCTGCCCATCTACCCCCTGGACGGCGGCCAGCTGATCGCCCAGTACATCCGCTCCCCCAGGAAAGTATT
CATGACCGGCTTCATCACGGCCATCCTCATCGGACTGCTCAGTTTCCAGCTTTTCCACGGCTACTTTATCCCCATCTTCA
TGGCCCTCTTCGCCTACAGCAATTACCGGGAATACAAAAACGCCCCCTTTTAA

Upstream 100 bases:

>100_bases
AGACTTTTAACATAATTCGCTGCGCCGCTCCAACGCCAAAACGGTGCATGCACATTCTCCGGGCTTGGCAAAACGGGAAT
CTGCCCTTACCCTCTCGCGC

Downstream 100 bases:

>100_bases
TATTATTCCGAGTTTCCTTTGCGGGCCCCGCCCGTTCTATTCAACAAACCATCCAATATGTCTCAGCAAACCGCAATCAC
CCCTACCCGCGCCCAGGATT

Product: peptidase M50

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MVHFTLFGIPVYIRPSFWVVLAIFGGALSISSVEDLIYPALFVIAGFIAILSHEMGHALVGRKLGGGQQTIVLELFGGLT
SSHGMQLTRGGRALMILAGPMMTLLLGIISLWLTWNIVAPVMASYNLNFWDLAISPFTAALISPKLYILSCLIMIGEWWT
ILNLLPIYPLDGGQLIAQYIRSPRKVFMTGFITAILIGLLSFQLFHGYFIPIFMALFAYSNYREYKNAPF

Sequences:

>Translated_230_residues
MVHFTLFGIPVYIRPSFWVVLAIFGGALSISSVEDLIYPALFVIAGFIAILSHEMGHALVGRKLGGGQQTIVLELFGGLT
SSHGMQLTRGGRALMILAGPMMTLLLGIISLWLTWNIVAPVMASYNLNFWDLAISPFTAALISPKLYILSCLIMIGEWWT
ILNLLPIYPLDGGQLIAQYIRSPRKVFMTGFITAILIGLLSFQLFHGYFIPIFMALFAYSNYREYKNAPF
>Mature_230_residues
MVHFTLFGIPVYIRPSFWVVLAIFGGALSISSVEDLIYPALFVIAGFIAILSHEMGHALVGRKLGGGQQTIVLELFGGLT
SSHGMQLTRGGRALMILAGPMMTLLLGIISLWLTWNIVAPVMASYNLNFWDLAISPFTAALISPKLYILSCLIMIGEWWT
ILNLLPIYPLDGGQLIAQYIRSPRKVFMTGFITAILIGLLSFQLFHGYFIPIFMALFAYSNYREYKNAPF

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25544; Mature: 25544

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVHFTLFGIPVYIRPSFWVVLAIFGGALSISSVEDLIYPALFVIAGFIAILSHEMGHALV
CEEEEEECCEEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRKLGGGQQTIVLELFGGLTSSHGMQLTRGGRALMILAGPMMTLLLGIISLWLTWNIVAP
HCCCCCCCCEEHHHHHCCCCCCCCEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH
VMASYNLNFWDLAISPFTAALISPKLYILSCLIMIGEWWTILNLLPIYPLDGGQLIAQYI
HHHHCCCCHHEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
RSPRKVFMTGFITAILIGLLSFQLFHGYFIPIFMALFAYSNYREYKNAPF
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVHFTLFGIPVYIRPSFWVVLAIFGGALSISSVEDLIYPALFVIAGFIAILSHEMGHALV
CEEEEEECCEEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRKLGGGQQTIVLELFGGLTSSHGMQLTRGGRALMILAGPMMTLLLGIISLWLTWNIVAP
HCCCCCCCCEEHHHHHCCCCCCCCEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH
VMASYNLNFWDLAISPFTAALISPKLYILSCLIMIGEWWTILNLLPIYPLDGGQLIAQYI
HHHHCCCCHHEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
RSPRKVFMTGFITAILIGLLSFQLFHGYFIPIFMALFAYSNYREYKNAPF
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA